Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for kdm5bb

Gene Name Gene ID Reads Annotation
kdm5bb ENSDARG00000003098 531 lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]










Genes with expression patterns similar to kdm5bb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kdm5bb ENSDARG00000003098 531 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
2. lrrc24 ENSDARG00000101704 224 2.631 - - - - - 0.811 0.832 0.988 - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
3. SHF SHF 92 2.526 - 0.828 - - - 0.880 0.818 - -
4. map9 ENSDARG00000037276, ENSDARG00000115648 581 1.831 - - - - - - 0.842 0.989 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
5. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.824 - - - - - - 0.835 0.989 - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
6. gfod2 ENSDARG00000061145 263 1.815 - - - - - - 0.849 0.966 - glucose-fructose oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-64]
7. ZNF335 ENSDARG00000076920 456 1.8 - 0.860 - - - - - 0.940 - zinc finger protein 335 [Source:HGNC Symbol;Acc:HGNC:15807]
8. tbr1a ENSDARG00000076259 341 1.771 - - - - - 0.891 - 0.880 - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
9. aldh3b1 ENSDARG00000013839 796 1.767 - - - - - 0.838 - 0.929 - aldehyde dehydrogenase 3 family, member B1 [Source:ZFIN;Acc:ZDB-GENE-021120-3]
10. tbl3 ENSDARG00000052344 1530 1.759 - - - - - 0.769 - 0.990 - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
11. ZBTB39 ENSDARG00000019265 687 1.743 - 0.774 - - - - - 0.969 - zinc finger and BTB domain containing 39 [Source:ZFIN;Acc:ZDB-GENE-130822-1]
12. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 1.739 - 0.760 - - - - - 0.979 - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
13. si:ch211-113p18.3 ENSDARG00000087835 377 1.738 - 0.751 - - - - - 0.987 - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
14. tmem88b ENSDARG00000069388 501 1.731 - - - - - 0.743 - 0.988 - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
15. mybbp1a ENSDARG00000078214 2458 1.705 - - - - - - 0.728 0.977 - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
16. CABZ01069006.1 CABZ01069006.1 363 1.704 - 0.716 - - - - - 0.988 -
17. plekhh1 ENSDARG00000053835 2123 1.686 - 0.748 - - - - - 0.938 - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
18. txnl4a ENSDARG00000036190 2048 1.656 - 0.795 - - - - - 0.861 - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
19. inpp5f ENSDARG00000061437 1228 1.649 - - - - - 0.907 0.742 - - inositol polyphosphate-5-phosphatase F [Source:ZFIN;Acc:ZDB-GENE-041111-194]
20. ptgis ENSDARG00000060094, ENSDARG00000113227 82 1.648 - - - - - 0.907 0.741 - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
21. GDPD4 GDPD4 513 1.632 - - - - - 0.852 0.780 - -
22. agmo ENSDARG00000025595 42 1.632 - - - - - 0.890 0.742 - - alkylglycerol monooxygenase [Source:ZFIN;Acc:ZDB-GENE-040426-2207]
23. ehmt2 ENSDARG00000102325 984 1.632 - - - - - 0.820 0.812 - - euchromatic histone-lysine N-methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-010501-6]
24. gpm6bb ENSDARG00000001676 2005 1.632 - - - - - - 0.767 0.865 - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
25. eno1b ENSDARG00000013750 63 1.627 - - - - - 0.840 0.787 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
26. csrp2bp 2642 1.626 - 0.876 - - - 0.750 - - - csrp2 binding protein
27. nde1 ENSDARG00000103902 557 1.625 - 0.888 - - - - 0.737 - - nudE neurodevelopment protein 1 [Source:ZFIN;Acc:ZDB-GENE-050913-61]
28. CABZ01045230.1 CABZ01045230.1 158 1.623 - 0.724 - - - 0.899 - - -
29. CU570684.5 CU570684.5 55 1.62 - 0.846 - - - - 0.774 - -
30. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 1.614 - 0.814 - - - 0.800 - - - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
31. PTS ENSDARG00000045269 2185 1.6 - 0.705 - - - - - 0.895 - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
32. slc6a6a ENSDARG00000012534 183 1.597 - 0.760 - - - 0.837 - - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
33. si:ch211-131e11.16 si:ch211-131e11.16 111 1.592 - 0.727 - - - 0.865 - - -
34. smc4 ENSDARG00000038882 4373 1.589 - - - - - 0.866 0.723 - - structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
35. otomp ENSDARG00000040306 682 1.583 - - - - - 0.873 - 0.710 - otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
36. si:ch211-171h4.7 ENSDARG00000088408 168 1.563 - 0.716 - - - - 0.847 - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
37. si:dkey-51d8.9 ENSDARG00000096217 47 1.56 - 0.752 - - - 0.808 - - - si:dkey-51d8.9 [Source:ZFIN;Acc:ZDB-GENE-110914-66]
38. tfcp2 ENSDARG00000060306 1024 1.559 - 0.767 - - - 0.792 - - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
39. slc25a35 ENSDARG00000102783 129 1.558 - 0.801 - - - 0.757 - - - solute carrier family 25, member 35 [Source:ZFIN;Acc:ZDB-GENE-060526-142]
40. swap70b ENSDARG00000057286, ENSDARG00000109359, ENSDARG00000110820 292 1.557 - - - - - 0.704 0.853 - - switching B cell complex subunit SWAP70b [Source:ZFIN;Acc:ZDB-GENE-030131-3587]
41. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 1.555 - 0.793 - - - 0.762 - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
42. zyx ENSDARG00000075733 429 1.54 - - - - - 0.712 0.828 - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
43. HIST1H4J HIST1H4J 31 1.538 - 0.763 - - - - 0.775 - -
44. gpr39 ENSDARG00000102888 46 1.535 - - - - - 0.830 0.705 - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
45. dusp7 ENSDARG00000101413 1307 1.533 - 0.741 - - - - 0.792 - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
46. MAGI3 MAGI3 114 1.532 - 0.766 - - - - 0.766 - -
47. nipblb ENSDARG00000061052 6109 1.523 - 0.762 - - - - - 0.761 - nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
48. ctdspl2b ENSDARG00000060586 1682 1.518 - 0.804 - - - - 0.714 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
49. zgc:114046 ENSDARG00000091728 68 1.516 - 0.772 - - - - 0.744 - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
50. zgc:112038 ENSDARG00000046140 73 1.479 - 0.732 - - - - 0.747 - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
51. Sep-10_1 Sep-10_1 424 1.459 - 0.753 - - - - 0.706 - -
52. ccbl1 702 1.447 - - - - - 0.707 0.740 - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
53. nom1 ENSDARG00000060027, ENSDARG00000112720 831 1.435 - 0.705 - - - - 0.730 - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
54. enosf1 ENSDARG00000038359 209 1.434 - 0.703 - - - 0.731 - - - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
55. GPR101 ENSDARG00000039218 157 0.991 - - - - - - - 0.991 - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
56. sult4a1 ENSDARG00000101967 205 0.991 - - - - - - - 0.991 - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
57. dmap1 ENSDARG00000042087 755 0.99 - - - - - - - 0.990 - DNA methyltransferase 1 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-748]
58. cetn3 ENSDARG00000011825 1087 0.99 - - - - - - - 0.990 - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
59. SIPA1 SIPA1 302 0.99 - - - - - - - 0.990 -
60. hsd17b12b ENSDARG00000035872 631 0.99 - - - - - - - 0.990 - hydroxysteroid (17-beta) dehydrogenase 12b [Source:ZFIN;Acc:ZDB-GENE-030131-1346]
61. ankrd37 ENSDARG00000056376 131 0.989 - - - - - - - 0.989 - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
62. si:ch211-241n15.2 si:ch211-241n15.2 435 0.989 - - - - - - - 0.989 -
63. GATC ENSDARG00000056855 551 0.989 - - - - - - - 0.989 - glutamyl-tRNA amidotransferase subunit C [Source:ZFIN;Acc:ZDB-GENE-060526-381]
64. bcl9 ENSDARG00000036687 1124 0.989 - - - - - - - 0.989 - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
65. SYNDIG1 ENSDARG00000100751 165 0.989 - - - - - - - 0.989 - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
66. abcb6b ENSDARG00000074254 600 0.989 - - - - - - - 0.989 - ATP-binding cassette, sub-family B (MDR/TAP), member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-584]
67. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 0.989 - - - - - - - 0.989 - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
68. ptprz1b ENSDARG00000020871 435 0.989 - - - - - - - 0.989 - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
69. zgc:112962 ENSDARG00000069102 431 0.989 - - - - - - - 0.989 - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]
70. atn1 ENSDARG00000092067 257 0.989 - - - - - - - 0.989 - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
71. ftr15 122 0.988 - - - - - - - 0.988 - finTRIM family, member 15
72. PREB ENSDARG00000101602 626 0.988 - - - - - - - 0.988 - prolactin regulatory element binding [Source:ZFIN;Acc:ZDB-GENE-040718-385]
73. C20H1orf198 C20H1orf198 246 0.988 - - - - - - - 0.988 -
74. lig4 ENSDARG00000060620 369 0.988 - - - - - - - 0.988 - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
75. kif7 ENSDARG00000033099 971 0.988 - - - - - - - 0.988 - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
76. slc29a4 ENSDARG00000059690 478 0.988 - - - - - - - 0.988 - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
77. l3mbtl1a ENSDARG00000014828 119 0.988 - - - - - - - 0.988 - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
78. mul1b ENSDARG00000052527 431 0.988 - - - - - - - 0.988 - mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
79. si:dkey-117p18.2 si:dkey-117p18.2 104 0.988 - - - - - - - 0.988 -
80. CABZ01087670.1 CABZ01087670.1 411 0.988 - - - - - - - 0.988 -
81. tceb1a 969 0.987 - - - - - - - 0.987 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
82. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.987 - - - - - - - 0.987 - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
83. tubgcp2 ENSDARG00000013079 1520 0.987 - - - - - - - 0.987 - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
84. fbxo11a ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 1129 0.987 - - - - - - - 0.987 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
85. phc1 ENSDARG00000002971 924 0.987 - - - - - - - 0.987 - polyhomeotic homolog 1 [Source:ZFIN;Acc:ZDB-GENE-081022-39]
86. wu:fj13e08 1223 0.987 - - - - - - - 0.987 - wu:fj13e08
87. cbll1 ENSDARG00000015222 995 0.987 - - - - - - - 0.987 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
88. prpf31 ENSDARG00000095904 526 0.986 - - - - - - - 0.986 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
89. vps36 ENSDARG00000057021 636 0.986 - - - - - - - 0.986 - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
90. lrp5 ENSDARG00000006921 3522 0.986 - - - - - - - 0.986 - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
91. scly ENSDARG00000073813 578 0.986 - - - - - - - 0.986 - selenocysteine lyase [Source:ZFIN;Acc:ZDB-GENE-080204-30]
92. smcr8a ENSDARG00000052818 559 0.986 - - - - - - - 0.986 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
93. ANO8 ANO8 380 0.986 - - - - - - - 0.986 -
94. onecutl ENSDARG00000040253 2143 0.986 - - - - - - - 0.986 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
95. syne1b ENSDARG00000063068 786 0.986 - - - - - - - 0.986 - spectrin repeat containing, nuclear envelope 1b [Source:ZFIN;Acc:ZDB-GENE-071218-4]
96. ZNF70_2 ZNF70_2 1866 0.986 - - - - - - - 0.986 -
97. ek1 ENSDARG00000020080 742 0.985 - - - - - - - 0.985 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
98. kidins220b ENSDARG00000017338 1937 0.985 - - - - - - - 0.985 - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
99. CASKIN2_1 CASKIN2_1 2299 0.985 - - - - - - - 0.985 -
100. clstn2 ENSDARG00000060637 548 0.985 - - - - - - - 0.985 - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]

There are 1436 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA