Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for kdm5ba

Gene Name Gene ID Reads Annotation
kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]










Genes with expression patterns similar to kdm5ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
2. cdc42ep1b ENSDARG00000077792 1569 2.547 0.743 0.845 - - - - 0.959 - - CDC42 effector protein (Rho GTPase binding) 1b [Source:ZFIN;Acc:ZDB-GENE-120215-219]
3. rtfdc1 1792 2.479 - 0.718 - - 0.930 0.831 - - - replication termination factor 2 domain containing 1, transcript variant X2
4. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1.92 - - - - 0.929 - 0.991 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
5. zgc:161969 ENSDARG00000041359 898 1.903 - - - - 0.921 - 0.982 - - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
6. cdkn2aipnl ENSDARG00000053395 5107 1.89 - - - - 0.939 - 0.951 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
7. mrpl27 ENSDARG00000032985 2158 1.874 - - - - 0.918 - 0.956 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
8. mapta ENSDARG00000089314 2038 1.84 - - - - - 0.867 0.973 - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
9. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.835 - - - - 0.883 - 0.952 - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
10. actr10 ENSDARG00000038432 1598 1.829 - - - - - 0.845 0.984 - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
11. mrpl12 ENSDARG00000038768 5539 1.82 - - - - 0.851 - 0.969 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
12. chst11 ENSDARG00000034375 2701 1.816 - - - - 0.843 - 0.973 - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
13. arid1ab ENSDARG00000101891 1722 1.809 - - - - 0.928 0.881 - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
14. kansl3 ENSDARG00000029556 2487 1.804 - - - - - 0.820 0.984 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
15. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.802 - - - - - 0.811 0.991 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
16. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.795 - - - - 0.821 - 0.974 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
17. abcb7 ENSDARG00000062795 1404 1.791 - - - - - 0.824 0.967 - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
18. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 1.783 - - - - - 0.789 0.994 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
19. wdr82 ENSDARG00000014083 3159 1.77 - - - - - 0.795 0.975 - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
20. rac3b ENSDARG00000020795 1523 1.767 - - - - - 0.776 0.991 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
21. sec22ba ENSDARG00000030108 1273 1.766 - 0.796 - - - - 0.970 - - SEC22 homolog B, vesicle trafficking protein a [Source:ZFIN;Acc:ZDB-GENE-010724-3]
22. mpdu1b ENSDARG00000040265 1968 1.765 - 0.774 - - - - 0.991 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
23. sp1 ENSDARG00000088347 1697 1.765 - - - - - 0.816 0.949 - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
24. sdc2 ENSDARG00000002731 6607 1.763 - - - - 0.865 - 0.898 - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
25. mpzl3 959 1.762 - 0.792 - - - - 0.970 - - myelin protein zero-like 3
26. cpsf1 ENSDARG00000034178 2036 1.761 - - - - - 0.777 0.984 - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
27. pdcd2l ENSDARG00000002754 417 1.76 - - - - 0.935 0.825 - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
28. utp3 ENSDARG00000056720 922 1.758 - - - - 0.930 0.828 - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
29. bin2b ENSDARG00000010255 2649 1.757 - 0.767 - - - - 0.990 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
30. agk ENSDARG00000009837, ENSDARG00000113514 811 1.749 0.755 - - - - - 0.994 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
31. ppp1cb ENSDARG00000044153 4748 1.744 - - - - 0.921 - 0.823 - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
32. polb ENSDARG00000003749 2049 1.743 - - - - 0.912 0.831 - - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
33. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.742 - - - - 0.924 0.818 - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
34. tnks tnks 1695 1.741 - - - - 0.919 0.822 - - -
35. ak2 ENSDARG00000005926 7598 1.74 - - - - 0.851 - 0.889 - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
36. flrt3 ENSDARG00000076895 3516 1.736 - - - - 0.810 0.926 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
37. kdm4b ENSDARG00000099675 2037 1.731 - - - - - 0.752 0.979 - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
38. uhrf1 ENSDARG00000103409 3282 1.73 - - - - - 0.744 0.986 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
39. unc5b ENSDARG00000033327 3432 1.728 - - - - 0.919 - 0.809 - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
40. CU929431.1 CU929431.1 2234 1.722 - - - - - 0.745 0.977 - -
41. snrnp70 ENSDARG00000077126 5921 1.713 - - - - - 0.735 0.978 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
42. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.712 - - - - - 0.830 0.882 - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
43. clptm1l ENSDARG00000021048 1234 1.709 - 0.734 - - - - 0.975 - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
44. gon4l ENSDARG00000005867 982 1.709 - - - - 0.933 0.776 - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
45. lrpap1 ENSDARG00000033604, ENSDARG00000116453 1389 1.708 - - - - - 0.725 0.983 - - low density lipoprotein receptor-related protein associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5871]
46. si:ch211-282k23.2 ENSDARG00000093591 447 1.707 - - - - 0.930 0.777 - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
47. ARHGAP23 ARHGAP23 3946 1.702 - - - - - 0.801 0.901 - -
48. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.7 - - - - 0.943 0.757 - - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
49. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.699 - - - - - 0.706 0.993 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
50. fbxl2 ENSDARG00000012135 577 1.694 - - - - - 0.710 0.984 - - F-box and leucine-rich repeat protein 2 [Source:ZFIN;Acc:ZDB-GENE-030925-12]
51. PRODH_1 PRODH_1 3400 1.689 - - - - 0.912 - 0.777 - -
52. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 1.681 - - - - 0.929 0.752 - - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
53. tmem184a ENSDARG00000104538 661 1.679 - 0.721 - - - - 0.958 - - transmembrane protein 184a [Source:ZFIN;Acc:ZDB-GENE-040426-2925]
54. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.677 - - - - 0.825 0.852 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
55. col14a1a ENSDARG00000005762 4778 1.676 - - - - 0.705 - 0.971 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
56. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.675 - 0.759 - - - - 0.916 - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
57. aatkb ENSDARG00000104442 392 1.674 - - - - 0.929 0.745 - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
58. sgcg_1 ENSDARG00000038107 1998 1.671 - - - - - 0.708 0.963 - - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
59. safb ENSDARG00000020467 5608 1.66 - - - - - - 0.946 - 0.714 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
60. prtfdc1 ENSDARG00000011683 1534 1.656 - - - - - 0.715 0.941 - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
61. idh3a ENSDARG00000030278 2983 1.653 - - - - 0.900 0.753 - - - isocitrate dehydrogenase 3 (NAD+) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1007]
62. ap1b1 ENSDARG00000020621 3874 1.647 - - - - - 0.740 0.907 - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
63. acbd3 ENSDARG00000042623 2643 1.64 - 0.717 - - - - 0.923 - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
64. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.638 - - - - 0.899 0.739 - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
65. slc39a13 ENSDARG00000000442 1367 1.637 0.708 - - - 0.929 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
66. hmga2 ENSDARG00000069912 20402 1.636 - - - - 0.932 0.704 - - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
67. sap30l ENSDARG00000030213 5795 1.627 - 0.704 - - 0.923 - - - - sap30-like [Source:ZFIN;Acc:ZDB-GENE-030131-5287]
68. cldn12 ENSDARG00000003927 2024 1.627 - - - - 0.899 0.728 - - - claudin 12 [Source:ZFIN;Acc:ZDB-GENE-010328-14]
69. clic4 ENSDARG00000022995 6064 1.623 - - - - - 0.733 0.890 - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
70. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.613 - - - - 0.901 0.712 - - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
71. rab11al ENSDARG00000014340 2116 1.613 - 0.703 - - - - 0.910 - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
72. ide ENSDARG00000075570 4331 1.612 - 0.722 - - 0.890 - - - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
73. coil ENSDARG00000040070 863 1.611 - - - - 0.824 0.787 - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
74. tuba8l3 ENSDARG00000070155 7525 1.602 - - - - - 0.809 0.793 - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
75. cnih cnih 8292 1.599 - - - - - 0.750 0.849 - -
76. enoph1 ENSDARG00000026198, ENSDARG00000111634, ENSDARG00000114318 1305 1.595 - 0.761 - - - 0.834 - - - enolase-phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-73]
77. ruvbl1 ENSDARG00000002591 2381 1.592 - - - - - 0.834 - 0.758 - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
78. zfand5b ENSDARG00000002271 4145 1.583 - - - - 0.810 0.773 - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
79. golga7 ENSDARG00000057676 4691 1.576 - - - - 0.875 0.701 - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
80. npm1b ENSDARG00000037675 5448 1.573 - - - - 0.791 0.782 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
81. MALSU1 MALSU1 1251 1.568 0.786 - - - - 0.782 - - -
82. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.567 - 0.714 - - - 0.853 - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
83. ndufa10 ENSDARG00000013333 6597 1.564 - 0.701 - - 0.863 - - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
84. SENP2 ENSDARG00000073837 1411 1.56 - - - - - 0.851 - - 0.709 SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
85. orai2 ENSDARG00000035148 330 1.547 - 0.703 - - - 0.844 - - - ORAI calcium release-activated calcium modulator 2 [Source:ZFIN;Acc:ZDB-GENE-060531-127]
86. fbl ENSDARG00000053912 5891 1.542 - - - - 0.802 - - - 0.740 fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
87. zcchc10 ENSDARG00000091092 1333 1.534 - - - - - 0.822 - - 0.712 zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
88. TNKS TNKS 2775 1.501 - - - - - 0.792 - - 0.709
89. zgc:162356 zgc:162356 5115 1.481 - - - - 0.767 - 0.714 - -
90. setbp1 ENSDARG00000093799 4499 1.478 - - - - - 0.723 - - 0.755 SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
91. sas sas 1783 1.472 - 0.723 - - - 0.749 - - -
92. dhrs3b ENSDARG00000044803 2931 1.468 - 0.701 - - - 0.767 - - - dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
93. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 1.464 - 0.720 - - - 0.744 - - - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
94. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.46 - - - - - 0.712 - - 0.748 transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
95. crebbpa ENSDARG00000104609 1739 1.459 - - - - - 0.748 - 0.711 - CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
96. arl1 ENSDARG00000101680 5973 1.445 - 0.738 - - - - 0.707 - - ADP-ribosylation factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-175]
97. coro1b ENSDARG00000008660 1220 1.444 - - - - - 0.743 - - 0.701 coronin, actin binding protein, 1B [Source:ZFIN;Acc:ZDB-GENE-040123-3]
98. hug 4100 1.423 - - - - - 0.704 - 0.719 - HuG, transcript variant X2
99. pnkp ENSDARG00000100455, ENSDARG00000114060 1475 1.418 - 0.718 - - - 0.700 - - - polynucleotide kinase 3'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-061013-433]
100. sigmar1 ENSDARG00000011418 1240 0.995 - - - - - - 0.995 - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]

There are 2153 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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