Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for kdm4b

Gene Name Gene ID Reads Annotation
kdm4b ENSDARG00000099675 2037 lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]










Genes with expression patterns similar to kdm4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kdm4b ENSDARG00000099675 2037 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
2. acbd3 ENSDARG00000042623 2643 2.329 0.721 0.718 - - - - 0.890 - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
3. nxf1 ENSDARG00000055076 3251 2.291 - - - - - 0.762 - 0.725 0.804 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
4. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 2.234 0.795 - 0.706 - - - - 0.733 - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
5. arid1aa ENSDARG00000101710 3644 2.209 - - - - - 0.718 - 0.714 0.777 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
6. gpm6ab ENSDARG00000004621 5825 2.206 0.756 - - - - - - 0.735 0.715 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
7. ormdl1 ENSDARG00000014333 1589 2.168 0.711 0.747 - 0.710 - - - - - ORMDL sphingolipid biosynthesis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030616-529]
8. lzic ENSDARG00000055899 638 1.908 0.930 - - - - - 0.978 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
9. cndp2 ENSDARG00000003931 1177 1.841 0.865 - - - - - 0.976 - - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
10. eif2ak3 ENSDARG00000062139 3276 1.819 0.889 - - - - - 0.930 - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
11. COL13A1 1565 1.819 0.852 - - - - - 0.967 - - collagen, type XIII, alpha 1, transcript variant X1
12. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.803 - 0.844 - - - - 0.959 - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
13. wu:fc34e06 1793 1.795 0.838 - - - - - 0.957 - - wu:fc34e06, transcript variant X10
14. papolg ENSDARG00000012141 1445 1.781 - - - - - - 0.985 - 0.796 poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
15. mpdu1b ENSDARG00000040265 1968 1.777 0.796 - - - - - 0.981 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
16. DUSP23_1 DUSP23_1 1085 1.765 - 0.783 - - - - 0.982 - -
17. etfa ENSDARG00000101631 2946 1.76 0.822 - - - - - 0.938 - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
18. snrnp70 ENSDARG00000077126 5921 1.758 0.768 - - - - - 0.990 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
19. glyr1 ENSDARG00000099213 6906 1.751 - - - - - - 0.948 0.803 - glyoxylate reductase 1 homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-041121-5]
20. ube2e1 ENSDARG00000116649 10656 1.746 - - - - - 0.817 0.929 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
21. fa2h ENSDARG00000090063 1084 1.742 0.842 - - - - - 0.900 - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
22. AL844567.1 AL844567.1 1605 1.739 - - - - - - 0.981 - 0.758
23. cpsf1 ENSDARG00000034178 2036 1.738 - - - - - 0.761 0.977 - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
24. plxna4 ENSDARG00000019328 782 1.733 - - - - - 0.756 0.977 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
25. cdc14b ENSDARG00000021483 4958 1.732 - - - - - - 0.973 - 0.759 cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
26. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.731 - - - - - 0.752 0.979 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
27. sdc2 ENSDARG00000002731 6607 1.731 0.825 - - - - - 0.906 - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
28. ubr2 ENSDARG00000070164 3960 1.73 - 0.769 - - - - 0.961 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
29. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.723 0.862 - - - - - 0.861 - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
30. dpm3 ENSDARG00000058650 4386 1.719 - - - - - 0.804 0.915 - - dolichyl-phosphate mannosyltransferase polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1782]
31. chchd1 ENSDARG00000029100 2121 1.719 0.747 - - - - - 0.972 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
32. kmt2a ENSDARG00000004537 2169 1.715 - - - - - 0.745 0.970 - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
33. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.714 - - - - - 0.742 0.972 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
34. eny2 ENSDARG00000070046 3741 1.711 - - - - - - 0.962 - 0.749 enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
35. ef1 1343 1.708 0.778 - - - - - 0.930 - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
36. MFAP3L ENSDARG00000062752, ENSDARG00000115337 1373 1.707 - 0.793 - - - - 0.914 - - microfibril associated protein 3 like [Source:ZFIN;Acc:ZDB-GENE-111229-2]
37. lsm7 ENSDARG00000058328 7191 1.705 0.839 - - - - - 0.866 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
38. ckap5 ENSDARG00000102674 5068 1.704 - 0.748 - - - - 0.956 - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
39. nup107 ENSDARG00000016010 1043 1.704 - - - - - - 0.972 - 0.732 nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
40. kansl3 ENSDARG00000029556 2487 1.697 - - - - - 0.711 0.986 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
41. TMEM184B TMEM184B 1280 1.693 - - - - - - 0.982 - 0.711
42. idh3g ENSDARG00000023648 4877 1.686 - 0.774 - - - - 0.912 - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
43. gnb1b_1 ENSDARG00000104372 3728 1.68 - - - - - - 0.977 0.703 - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
44. ube2f ENSDARG00000025754 1946 1.678 0.863 - - - - 0.815 - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
45. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.676 - - - - - - 0.972 - 0.704 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
46. ccnb3 ENSDARG00000034855, ENSDARG00000110875 2123 1.674 0.826 - - - - 0.848 - - - cyclin B3 [Source:ZFIN;Acc:ZDB-GENE-060929-684]
47. dnttip2 ENSDARG00000057648 2381 1.673 - 0.709 - - - - 0.964 - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
48. TRAK2 ENSDARG00000102471 2258 1.669 0.916 - - - - - - - 0.753 trafficking protein, kinesin binding 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7496]
49. clic4 ENSDARG00000022995 6064 1.669 - - - - - 0.748 0.921 - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
50. scaf11 ENSDARG00000045885 3531 1.668 - - - - - 0.726 0.942 - - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
51. sec22ba ENSDARG00000030108 1273 1.66 - 0.701 - - - - 0.959 - - SEC22 homolog B, vesicle trafficking protein a [Source:ZFIN;Acc:ZDB-GENE-010724-3]
52. ankrd28b ENSDARG00000009023 960 1.658 0.897 0.761 - - - - - - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
53. gpcpd1 ENSDARG00000016011 2563 1.646 0.888 - - - - - 0.758 - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
54. acsf2 ENSDARG00000061201 4413 1.636 0.769 - - - - - 0.867 - - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
55. ap1b1 ENSDARG00000020621 3874 1.634 - - - - - 0.710 0.924 - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
56. aup1 ENSDARG00000092609 2431 1.629 0.893 0.736 - - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
57. inppl1a ENSDARG00000104222 6256 1.627 0.760 - - - - - 0.867 - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
58. mad2l1 ENSDARG00000004713 3398 1.626 0.877 - - - - - - - 0.749 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
59. hsd11b3a hsd11b3a 1388 1.622 - 0.701 - - - - 0.921 - -
60. lyrm2 ENSDARG00000033138 5597 1.614 0.731 - - - - - 0.883 - - LYR motif containing 2 [Source:ZFIN;Acc:ZDB-GENE-040914-27]
61. sc:d173 sc:d173 1279 1.613 - 0.701 - - - - 0.912 - -
62. scaf1 ENSDARG00000054010 3752 1.608 0.851 - - - - - - - 0.757 SR-related CTD-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-120215-214]
63. zgc:92313 ENSDARG00000040513 790 1.605 0.905 0.700 - - - - - - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
64. EML4_1 EML4_1 8736 1.601 0.745 - - - - - 0.856 - -
65. cnih cnih 8292 1.6 - - - - - 0.738 0.862 - -
66. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.6 0.887 - - - - - - - 0.713 zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
67. tbl1xr1b ENSDARG00000008966 2203 1.598 - 0.853 - - - - - - 0.745 transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
68. stxbp3 ENSDARG00000008142 2604 1.593 0.778 0.815 - - - - - - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
69. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.592 0.863 - - - - 0.729 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
70. man2b1 ENSDARG00000001897 1042 1.587 0.873 0.714 - - - - - - - mannosidase, alpha, class 2B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-52]
71. npm1b ENSDARG00000037675 5448 1.583 - - - - - 0.760 - 0.823 - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
72. ahctf1 ENSDARG00000077530 2315 1.578 0.821 - - - - - - - 0.757 AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
73. myo1c myo1c 4978 1.578 0.727 - - - - - 0.851 - -
74. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.568 0.865 - - - - - - 0.703 - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
75. ap3m2 ENSDARG00000016128 851 1.567 0.837 - - - - 0.730 - - - adaptor related protein complex 3 subunit mu 2 [Source:ZFIN;Acc:ZDB-GENE-021022-2]
76. syncripl ENSDARG00000026723 3889 1.562 0.848 0.714 - - - - - - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
77. urah urah 4152 1.542 0.731 - - - - - 0.811 - -
78. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.527 0.755 - - - - 0.772 - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
79. ptbp2b ENSDARG00000015901 2458 1.525 - 0.709 - - - 0.816 - - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
80. bcl2l1 ENSDARG00000008434 1956 1.519 0.767 - - - - 0.752 - - - bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
81. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.518 - - - - - 0.771 0.747 - - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
82. ENSDARG00000086641 ENSDARG00000086641 1819 1.514 0.791 0.723 - - - - - - -
83. arhgef2 ENSDARG00000075819 2173 1.513 - - - - - - - 0.736 0.777 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
84. sap30bp ENSDARG00000031261 1348 1.513 - - - - - 0.803 - 0.710 - SAP30 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-457]
85. snrpa ENSDARG00000018890 4593 1.511 - - - - - 0.776 - - 0.735 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
86. proc proc 1038 1.509 - 0.759 - - - - 0.750 - -
87. MAP4K4 ENSDARG00000098670 4665 1.509 - - - - - 0.804 - - 0.705 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
88. tcea1 ENSDARG00000003531 2912 1.502 0.788 - - - - - - - 0.714 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
89. coro1ca ENSDARG00000035598 9278 1.501 0.730 0.771 - - - - - - - coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
90. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.5 - - - - - - 0.791 - 0.709 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
91. sephs1 ENSDARG00000058292 3347 1.494 - 0.762 - - - - - - 0.732 selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
92. acsl5 ENSDARG00000075931 880 1.494 0.713 - - - - - 0.781 - - acyl-CoA synthetase long chain family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-169]
93. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.494 0.709 - - - - - 0.785 - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
94. RNF38 ENSDARG00000062055 3901 1.494 - - - 0.708 - 0.786 - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
95. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.489 - - - - - 0.731 - - 0.758 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
96. CR388231.3 ENSDARG00000105601 2404 1.481 - - - - - 0.711 - - 0.770
97. krt17 ENSDARG00000094041 7683 1.475 0.733 0.742 - - - - - - - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
98. dnmt3b dnmt3b 2522 1.473 - - - - - - - 0.737 0.736
99. commd3 ENSDARG00000045402 1601 1.47 - 0.741 - - - 0.729 - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
100. slc4a1ap ENSDARG00000034160 749 1.468 - 0.740 - - - 0.728 - - - solute carrier family 4 (anion exchanger), member 1, adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080521-2]

There are 1337 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA