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Results for kdm4ab

Gene Name Gene ID Reads Annotation
kdm4ab ENSDARG00000019103 521 lysine (K)-specific demethylase 4A, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-030131-6279]










Genes with expression patterns similar to kdm4ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kdm4ab ENSDARG00000019103 521 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 4A, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-030131-6279]
2. AOC3 AOC3 590 1.615 0.774 - - 0.841 - - - - -
3. si:dkey-10p5.10 ENSDARG00000099307 371 1.574 - - - - - 0.750 0.824 - - si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
4. CR848664.3 CR848664.3 183 1.521 0.810 - - - - - 0.711 - -
5. tbrg1 ENSDARG00000074996 733 1.516 0.798 - - - - - 0.718 - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
6. kptn ENSDARG00000015937, ENSDARG00000111197 290 1.491 - - - 0.717 - - 0.774 - - kaptin (actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-040801-258]
7. mtrf1l ENSDARG00000060005 177 1.485 - - - - - - 0.779 - 0.706 mitochondrial translational release factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-8198]
8. ddx1 ENSDARG00000032117 1295 1.483 - - - 0.756 - - - - 0.727 DEAD (Asp-Glu-Ala-Asp) box helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-215]
9. CLMP 108 1.453 0.746 0.707 - - - - - - - CXADR like membrane protein
10. elk1 ENSDARG00000078066 414 0.961 - 0.961 - - - - - - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
11. rapgef1a ENSDARG00000043593 416 0.94 - - - 0.940 - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
12. IER2 IER2 604 0.925 - - - 0.925 - - - - -
13. Sep-10_1 Sep-10_1 424 0.918 - - - 0.918 - - - - -
14. RBM12B ENSDARG00000079717 541 0.917 - - - 0.917 - - - - - RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
15. wu:fc26g07 wu:fc26g07 1165 0.912 - 0.912 - - - - - - -
16. col8a2 ENSDARG00000060893 504 0.899 - - - 0.899 - - - - - collagen, type VIII, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060503-488]
17. grhl3 ENSDARG00000078552 897 0.884 - - - 0.884 - - - - - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
18. prosc 925 0.881 - - - 0.881 - - - - - pyridoxal phosphate binding protein, transcript variant X1
19. pex26 ENSDARG00000073858 244 0.881 - 0.881 - - - - - - - peroxisomal biogenesis factor 26 [Source:ZFIN;Acc:ZDB-GENE-030131-6584]
20. agfg1b ENSDARG00000019526 472 0.88 - - - 0.880 - - - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
21. NUP54 ENSDARG00000103296 433 0.873 - 0.873 - - - - - - - nucleoporin 54 [Source:ZFIN;Acc:ZDB-GENE-040426-2263]
22. ARHGEF17 ENSDARG00000101644 625 0.87 - - - 0.870 - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
23. proza ENSDARG00000037783, ENSDARG00000116864 500 0.865 - - - - - - 0.865 - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
24. dacha ENSDARG00000010132 648 0.864 - - - 0.864 - - - - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
25. utp3 ENSDARG00000056720 922 0.863 - - - 0.863 - - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
26. irs1 ENSDARG00000054087 1809 0.861 - - - 0.861 - - - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
27. zgc:136474 zgc:136474 658 0.86 - - - 0.860 - - - - -
28. ptprga ENSDARG00000045006 719 0.859 - - - 0.859 - - - - - protein tyrosine phosphatase, receptor type, g a [Source:ZFIN;Acc:ZDB-GENE-101101-4]
29. pnpla6 ENSDARG00000010773 510 0.856 - - - - - 0.856 - - - patatin-like phospholipase domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050107-4]
30. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 0.854 - 0.854 - - - - - - - glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
31. xab2 ENSDARG00000007092 229 0.849 - 0.849 - - - - - - - XPA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-685]
32. TP53BP2 TP53BP2 217 0.844 - - - - - - 0.844 - -
33. vps13d ENSDARG00000017986 183 0.842 - - - - - - 0.842 - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
34. si:dkey-57k17.1 ENSDARG00000104697 442 0.84 - - - 0.840 - - - - - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
35. CR384099.1 ENSDARG00000089193 193 0.839 - 0.839 - - - - - - -
36. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 0.837 - - - - - - 0.837 - - cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
37. kidins220b ENSDARG00000017338 1937 0.834 - 0.834 - - - - - - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
38. duox ENSDARG00000062632 1406 0.831 0.831 - - - - - - - - dual oxidase [Source:ZFIN;Acc:ZDB-GENE-091117-14]
39. znf839 ENSDARG00000076988 1032 0.831 - - - 0.831 - - - - - zinc finger protein 839 [Source:ZFIN;Acc:ZDB-GENE-030131-4936]
40. dchs1b ENSDARG00000079850 831 0.83 - - - - - - 0.830 - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
41. shisa2 856 0.83 - - - 0.830 - - - - - shisa family member 2, transcript variant X2
42. cox16 ENSDARG00000039136 1066 0.828 0.828 - - - - - - - - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]
43. plcg2 ENSDARG00000068763 102 0.828 - 0.828 - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
44. si:dkey-9i23.15 ENSDARG00000093997 544 0.826 - 0.826 - - - - - - - si:dkey-9i23.15 [Source:ZFIN;Acc:ZDB-GENE-090313-361]
45. zw10 ENSDARG00000018738 801 0.826 - - - 0.826 - - - - - zw10 kinetochore protein [Source:ZFIN;Acc:ZDB-GENE-040426-800]
46. disc1 ENSDARG00000021895 155 0.825 - - - - - - 0.825 - - DISC1 scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090122-1]
47. kif15 ENSDARG00000012073 1936 0.824 - 0.824 - - - - - - - kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
48. itga8 ENSDARG00000078717 215 0.822 - 0.822 - - - - - - - integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]
49. zgc:171566 ENSDARG00000105118 340 0.821 - - - - - - 0.821 - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
50. rab6a ENSDARG00000103714 1027 0.82 - 0.820 - - - - - - - RAB6A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2849]
51. prpf31 ENSDARG00000095904 526 0.817 - - - - - - 0.817 - - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
52. cndp2 ENSDARG00000003931 1177 0.817 - - - 0.817 - - - - - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
53. ARAP2 ARAP2 428 0.817 - - - - - - 0.817 - -
54. dtl ENSDARG00000023002 572 0.816 0.816 - - - - - - - - denticleless E3 ubiquitin protein ligase homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020419-34]
55. tmem201 ENSDARG00000077307 453 0.816 0.816 - - - - - - - - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
56. eme1 ENSDARG00000076913 376 0.815 - 0.815 - - - - - - - essential meiotic structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3191]
57. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 0.815 - - - 0.815 - - - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
58. a1cf ENSDARG00000002968 284 0.814 - 0.814 - - - - - - - apobec1 complementation factor [Source:ZFIN;Acc:ZDB-GENE-060824-3]
59. 5S_rRNA_18 5S_rRNA_18 270 0.813 - - - - - 0.813 - - -
60. amt ENSDARG00000010862, ENSDARG00000113280 367 0.813 - 0.813 - - - - - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
61. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 0.812 - 0.812 - - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
62. RAP1A RAP1A 502 0.81 - - - 0.810 - - - - -
63. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.809 - 0.809 - - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
64. RBM6 ENSDARG00000077060 3521 0.809 - - - 0.809 - - - - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
65. kri1 ENSDARG00000075380 1463 0.807 - - - 0.807 - - - - - KRI1 homolog [Source:ZFIN;Acc:ZDB-GENE-040915-3]
66. si:dkey-92i17.2 ENSDARG00000093612 707 0.807 - 0.807 - - - - - - - si:dkey-92i17.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6759]
67. si:dkeyp-68b7.5_1 ENSDARG00000079930 159 0.804 0.804 - - - - - - - - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
68. cln6a ENSDARG00000077584 1090 0.804 - 0.804 - - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
69. GPN1 ENSDARG00000043928 566 0.803 - 0.803 - - - - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
70. CABZ01032467.1 CABZ01032467.1 400 0.802 - - - - - - 0.802 - -
71. rab6bb ENSDARG00000031343 1381 0.802 - 0.802 - - - - - - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
72. nf1b ENSDARG00000004184 548 0.802 0.802 - - - - - - - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
73. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 0.8 0.800 - - - - - - - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
74. lrrc40 ENSDARG00000017708 1156 0.8 - - - 0.800 - - - - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
75. mrpl9 ENSDARG00000063249 783 0.798 - - - 0.798 - - - - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
76. crfb5 crfb5 342 0.798 - - - 0.798 - - - - -
77. ccnd2b ENSDARG00000070408 411 0.798 0.798 - - - - - - - - cyclin D2, b [Source:ZFIN;Acc:ZDB-GENE-050420-354]
78. arid1b ENSDARG00000092503 1376 0.798 - 0.798 - - - - - - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
79. dnajb9a ENSDARG00000052072 578 0.797 - 0.797 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
80. CR387996.2 CR387996.2 1272 0.796 - 0.796 - - - - - - -
81. tmed8 ENSDARG00000052390 469 0.796 - 0.796 - - - - - - - transmembrane p24 trafficking protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-283]
82. fbxo21 ENSDARG00000076611 466 0.796 0.796 - - - - - - - - F-box protein 21 [Source:ZFIN;Acc:ZDB-GENE-100922-229]
83. rpp21 ENSDARG00000043404, ENSDARG00000109965 469 0.795 - - - - - - 0.795 - - ribonuclease P 21 subunit [Source:ZFIN;Acc:ZDB-GENE-040801-37]
84. agtr2 ENSDARG00000035552 286 0.795 - - - 0.795 - - - - - angiotensin II receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050306-56]
85. mlx ENSDARG00000037891 433 0.793 0.793 - - - - - - - - MLX, MAX dimerization protein [Source:ZFIN;Acc:ZDB-GENE-050522-316]
86. pskh1 ENSDARG00000056713, ENSDARG00000115380, ENSDARG00000115957 574 0.793 - - - - - - - 0.793 - protein serine kinase H1 [Source:ZFIN;Acc:ZDB-GENE-050119-1]
87. ddx20 ENSDARG00000061204 477 0.793 - - - - - - - - 0.793 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-030131-202]
88. mrpl39 ENSDARG00000041570 594 0.792 - - - - - 0.792 - - - mitochondrial ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-030131-6520]
89. slc35d2 ENSDARG00000089837 1606 0.791 - 0.791 - - - - - - - solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 [Source:ZFIN;Acc:ZDB-GENE-080125-1]
90. galnt13 ENSDARG00000099227 1059 0.791 - - - - - - 0.791 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
91. atad5a ENSDARG00000070568 1840 0.79 - - - - - - - 0.790 - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
92. atcaya ENSDARG00000071678 344 0.789 - - - - - - - - 0.789 ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
93. prtfdc1 ENSDARG00000011683 1534 0.789 0.789 - - - - - - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
94. wdr92 ENSDARG00000037334 329 0.788 0.788 - - - - - - - - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
95. nkain4 ENSDARG00000062699 377 0.787 0.787 - - - - - - - - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
96. C14HXorf65 C14HXorf65 49 0.786 - - - - - - 0.786 - -
97. tsen15 ENSDARG00000069280 240 0.786 0.786 - - - - - - - - TSEN15 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-041008-211]
98. pmt ENSDARG00000100482 228 0.786 - 0.786 - - - - - - - phosphoethanolamine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060929-740]
99. TTF2 ENSDARG00000104105 564 0.786 - - - - - - - - 0.786 transcription termination factor, RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-110411-73]
100. cstf2 ENSDARG00000090788 170 0.786 - 0.786 - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]

There are 427 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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