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Results for kdm1a

Gene Name Gene ID Reads Annotation
kdm1a ENSDARG00000060679 6152 lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]










Genes with expression patterns similar to kdm1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kdm1a ENSDARG00000060679 6152 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
2. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 4.925 0.736 - 0.736 - 0.879 0.988 0.835 0.751 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
3. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 4.076 - 0.734 0.760 0.754 - 0.989 0.839 - - max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
4. apex1 ENSDARG00000045843 6345 3.398 - - 0.805 - - - 0.793 0.803 0.997 APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
5. znf865 ENSDARG00000036698 15532 3.361 - 0.804 - 0.769 0.907 - 0.881 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
6. mcm7 ENSDARG00000101180 12417 3.272 - - - 0.825 0.814 - 0.815 0.818 - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
7. llgl1 ENSDARG00000009693 4205 3.236 - - 0.808 - - 0.987 0.726 0.715 - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
8. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 3.202 - - 0.712 0.761 0.908 - 0.821 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
9. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 3.175 0.835 - - 0.743 - - 0.716 0.881 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
10. prmt1 ENSDARG00000010246 11311 3.165 0.755 - 0.752 - - - 0.732 0.926 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
11. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 3.143 0.757 - - 0.775 0.892 - 0.719 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
12. fen1 ENSDARG00000011404 3358 3.138 - 0.722 0.733 - 0.940 - 0.743 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
13. tmpob ENSDARG00000022978 8121 3.13 0.796 - 0.825 0.706 - - 0.803 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
14. ylpm1 ENSDARG00000043680 7676 3.113 - - 0.728 0.810 0.796 - 0.779 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
15. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 3.086 0.712 - - - - - 0.825 0.830 0.719 adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
16. msi1 ENSDARG00000010710 2634 3.077 0.737 - 0.811 - 0.822 - 0.707 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
17. cspg5a ENSDARG00000069981 1699 3.041 0.747 - 0.721 - - - 0.707 0.866 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
18. C24H17orf96 C24H17orf96 1538 3.027 - - 0.703 0.708 0.905 - 0.711 - -
19. nrarpb ENSDARG00000018958 6225 3.026 - - - 0.786 0.789 - 0.740 0.711 - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
20. pcdh1gc5 ENSDARG00000104826 10052 2.974 0.709 - 0.781 - - - 0.714 0.770 - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
21. AGO1 ENSDARG00000092644 4521 2.962 0.770 - 0.711 - - - 0.752 0.729 - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
22. her2 ENSDARG00000038205 3219 2.95 0.767 - - 0.777 - - 0.702 0.704 - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
23. fam60al 2846 2.943 0.724 - 0.755 - - - 0.756 0.708 - family with sequence similarity 60, member A, like
24. vezf1a ENSDARG00000008247 1449 2.94 - - 0.712 0.752 - - 0.745 0.731 - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
25. axin2 ENSDARG00000100149 4223 2.703 - - - - 0.893 0.994 - 0.816 - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
26. wu:fq41a10 wu:fq41a10 7009 2.615 - - - 0.831 - 0.953 0.831 - -
27. mier1a ENSDARG00000041072 1690 2.614 - - - - - 0.990 0.748 0.876 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
28. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.609 - 0.784 - - - 0.992 0.833 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
29. brms1la ENSDARG00000006235 2011 2.599 - - - - 0.874 0.977 0.748 - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
30. TNRC6A ENSDARG00000079688 14433 2.55 - - 0.819 - - - 0.843 - 0.888 trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
31. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.537 - - - 0.765 - 0.885 0.887 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
32. lsm14ab ENSDARG00000100553 3837 2.536 - - - - 0.918 - 0.767 0.851 - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
33. si:dkey-19e4.5 ENSDARG00000089886 2562 2.508 - 0.805 - - - - 0.734 0.969 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
34. TTYH3 TTYH3 1841 2.505 - - - - - 0.991 0.704 0.810 -
35. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.479 - - 0.805 - 0.887 - 0.787 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
36. rbb4 rbb4 15541 2.466 - - 0.793 - - - 0.800 0.873 -
37. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 2.465 0.732 - - - - - 0.747 - 0.986 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
38. srpk1b ENSDARG00000031560 2079 2.45 - - 0.763 - 0.909 - 0.778 - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
39. tgif1 ENSDARG00000059337 4020 2.448 - - 0.842 0.763 - - 0.843 - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
40. kif22 ENSDARG00000102624 3694 2.444 - - 0.759 - 0.861 - 0.824 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
41. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.428 0.739 - 0.790 - 0.899 - - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
42. snrpd3l ENSDARG00000076283 7655 2.42 - - - 0.779 0.849 - 0.792 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
43. hmgb1b ENSDARG00000030479 10398 2.4 0.727 - 0.867 - - - 0.806 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
44. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 2.389 - - 0.766 0.736 - - - 0.887 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
45. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.389 - - 0.800 0.802 - - 0.787 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
46. scube2 ENSDARG00000037362 2833 2.383 0.748 - - - 0.865 - 0.770 - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
47. UBE2QL1 ENSDARG00000079276 3474 2.374 0.792 - - - 0.860 - 0.722 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
48. hnrnpub ENSDARG00000004735 16496 2.367 0.716 - - 0.730 - - 0.921 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
49. ZFHX3 ENSDARG00000103057 7759 2.356 0.774 - 0.760 - - - 0.822 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
50. snrpc ENSDARG00000009871 9567 2.348 0.742 - - 0.776 - - 0.830 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
51. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 2.346 - - - 0.741 0.860 - 0.745 - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
52. plagx ENSDARG00000036855 3768 2.345 - - 0.778 - - - 0.791 0.776 - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
53. ptprna ENSDARG00000058646 1327 2.344 - - 0.762 - - - 0.707 0.875 - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
54. tmpoa ENSDARG00000007315 3638 2.339 - - - 0.766 - - 0.761 0.812 - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
55. CR936437.1 CR936437.1 6465 2.333 - - 0.781 0.780 - - 0.772 - -
56. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 2.333 - - 0.713 - 0.884 - 0.736 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
57. nucks1a ENSDARG00000078473 28285 2.332 - 0.771 0.854 - - - - 0.707 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
58. SENP1 SENP1 1122 2.323 - - - 0.708 0.856 - - 0.759 -
59. SRGAP3 ENSDARG00000060309 5353 2.316 - - 0.717 0.705 0.894 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
60. mta2 ENSDARG00000013031 2932 2.31 - - 0.751 0.714 - - 0.845 - - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
61. smo ENSDARG00000002952 6411 2.306 0.708 - - - 0.880 - 0.718 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
62. dpysl5a ENSDARG00000011141 1827 2.304 0.748 - 0.724 - - - - 0.832 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
63. dhfr ENSDARG00000004251 1824 2.297 0.703 - - - 0.877 - 0.717 - - dihydrofolate reductase [Source:ZFIN;Acc:ZDB-GENE-010406-5]
64. ahctf1 ENSDARG00000077530 2315 2.291 - - - 0.784 - - 0.718 0.789 - AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
65. cdc25 cdc25 3913 2.289 - 0.715 0.763 - - - 0.811 - -
66. zgc:174906 ENSDARG00000075314 2187 2.288 - - 0.709 0.774 - - 0.805 - - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
67. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.281 0.772 - 0.795 - - - 0.714 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
68. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.277 - - 0.795 0.705 - - 0.777 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
69. npm1b ENSDARG00000037675 5448 2.271 0.798 - - 0.709 - - 0.764 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
70. srgap1 srgap1 2320 2.269 - - - 0.701 0.844 - 0.724 - -
71. npas3b npas3b 1446 2.265 - - 0.756 0.803 - - 0.706 - -
72. slbp ENSDARG00000100558 3405 2.258 - - 0.750 0.751 - - - 0.757 - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
73. rrm1 ENSDARG00000014017 7296 2.249 0.732 - - 0.704 - - 0.813 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
74. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.247 0.751 - 0.705 - - - - 0.791 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
75. top2b ENSDARG00000034195 3715 2.235 - - 0.721 - - - 0.812 0.702 - DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
76. slc29a1a ENSDARG00000101289 2074 2.23 0.710 - 0.741 - - - - 0.779 - solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
77. elof1 ENSDARG00000099453 6176 2.227 - - 0.723 - - - 0.782 0.722 - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
78. CABZ01070258.1 ENSDARG00000105687 3643 2.222 0.743 - 0.764 - - - 0.715 - -
79. pum1 ENSDARG00000099256 5017 2.22 - 0.765 - - - - 0.730 0.725 - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
80. vezf1b ENSDARG00000061030 1410 2.209 - 0.765 0.741 - - - 0.703 - - vascular endothelial zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-060825-121]
81. nova2 ENSDARG00000017673 7685 2.205 0.745 - - 0.738 - - 0.722 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
82. nkain1 ENSDARG00000006859 1961 2.192 - - 0.720 - - - 0.738 0.734 - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
83. usp10 ENSDARG00000103422 4247 2.187 - 0.722 0.738 - - - 0.727 - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
84. srsf4 ENSDARG00000105293 9657 2.185 - - - 0.735 0.738 - 0.712 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
85. nes ENSDARG00000088805 2710 2.182 0.724 - - 0.753 - - 0.705 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
86. gnao1a ENSDARG00000016676 8184 2.18 0.717 - 0.700 - - - 0.763 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
87. si:ch73-21g5.7 ENSDARG00000093156 9412 2.18 0.708 - 0.745 - - - 0.727 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
88. stmn1b ENSDARG00000033655 9491 2.178 0.714 - 0.730 - - - 0.734 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
89. EFCC1 ENSDARG00000077826 1359 2.146 0.726 0.709 - - - - 0.711 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
90. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.973 - - - - - 0.990 - - 0.983 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
91. tmed7 ENSDARG00000046022 2435 1.972 - - - - - 0.990 - - 0.982 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
92. C1QBP ENSDARG00000039887 11186 1.884 - - - - - 0.908 - - 0.976 complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
93. znf280d ENSDARG00000077013 1387 1.866 - - - - - 0.992 - 0.874 - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
94. cbx3a ENSDARG00000003860 4922 1.865 - - - - 0.878 0.987 - - - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
95. eif4g3b ENSDARG00000074331, ENSDARG00000116386 1155 1.86 - 0.871 - - - 0.989 - - - eukaryotic translation initiation factor 4 gamma, 3b [Source:ZFIN;Acc:ZDB-GENE-090312-49]
96. BAZ2B BAZ2B 3285 1.852 - - - - - - 0.859 - 0.993
97. naa15a ENSDARG00000003213 5889 1.832 - - - - 0.850 - - - 0.982 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
98. dnajc15 ENSDARG00000038309 1274 1.818 - - - - 0.831 0.987 - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
99. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.817 - - - - - 0.954 0.863 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
100. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.806 - - - - 0.835 0.971 - - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]

There are 2069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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