Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for kctd16a

Gene Name Gene ID Reads Annotation
kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]










Genes with expression patterns similar to kctd16a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
2. atat1 ENSDARG00000004472 700 2.879 - 1.000 - - - 0.927 0.952 - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
3. PPFIA3 ENSDARG00000077053 310 2.844 0.874 1.000 - - - 0.970 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
4. CABZ01065506.1 CABZ01065506.1 204 2.776 0.874 1.000 - - - 0.902 - - -
5. syt9a ENSDARG00000003994 298 2.743 0.849 1.000 - - - 0.894 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
6. XKR7 ENSDARG00000026333 175 2.679 0.739 1.000 - - - 0.940 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
7. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 2.624 - 0.900 - - - 0.943 0.781 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
8. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 2.613 0.864 0.822 - - - 0.927 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
9. zgc:194665 ENSDARG00000004577 136 2.591 0.890 1.000 - - - - 0.701 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
10. si:dkey-100n10.2 101 2.562 0.866 - - - - 0.978 0.718 - - si:dkey-100n10.2
11. nmnat2 ENSDARG00000004580 370 2.532 0.819 0.948 - - - 0.765 - - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
12. scin ENSDARG00000010728, ENSDARG00000111092 437 2.497 0.738 1.000 - - - 0.759 - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
13. TRPC4_1 TRPC4_1 212 2.447 0.770 - - - - 0.900 0.777 - -
14. kcnn1a ENSDARG00000091306 95 2.419 0.754 - - - - 0.918 0.747 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
15. atp2b3b ENSDARG00000023445 1424 2.405 0.847 0.716 - - - 0.842 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
16. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.372 0.827 0.754 - - - 0.791 - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
17. B4GALNT1 B4GALNT1 352 2.342 0.708 0.753 - - - 0.881 - - -
18. pknox2 ENSDARG00000055349 784 2.318 0.755 - - - - 0.859 0.704 - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
19. rtn4r ENSDARG00000090035 46 2.315 0.874 0.709 - - - - 0.732 - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
20. KCNIP4 ENSDARG00000088100 86 1.924 - 1.000 - - - 0.924 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
21. sgms2 57 1.911 - 1.000 - - - 0.911 - - - sphingomyelin synthase 2, transcript variant X1
22. cbln1 ENSDARG00000057296 165 1.908 0.947 - - - - 0.961 - - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
23. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.9 0.931 - - - - 0.969 - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
24. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.9 0.900 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
25. nrcam nrcam 397 1.896 - 1.000 - - - 0.896 - - -
26. SSBP2 ENSDARG00000099727 22 1.893 - 1.000 - - - 0.893 - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
27. TUBB2A TUBB2A 142 1.885 0.967 - - - - 0.918 - - -
28. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.884 - 1.000 - - - 0.884 - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
29. st6gal1 ENSDARG00000044514 142 1.883 0.924 - - - - 0.959 - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
30. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.881 - 1.000 - - - 0.881 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
31. bsk146 ENSDARG00000099069 274 1.881 - 1.000 - - - 0.881 - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
32. si:dkey-56m15.4 si:dkey-56m15.4 39 1.874 0.874 1.000 - - - - - - -
33. lppr5b lppr5b 23 1.874 0.874 1.000 - - - - - - -
34. BX548021.2 BX548021.2 4 1.874 0.874 1.000 - - - - - - -
35. si:ch211-10j20.7 si:ch211-10j20.7 8 1.874 0.874 1.000 - - - - - - -
36. si:dkey-4j21.1 17 1.874 0.874 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
37. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.874 0.874 1.000 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
38. PGBD4 ENSDARG00000079328 20 1.874 0.874 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
39. nrxn2a ENSDARG00000061454 291 1.87 0.934 - - - - 0.936 - - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
40. si:dkey-245p14.4 ENSDARG00000070320 418 1.865 0.908 - - - - 0.957 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
41. si:ch211-255a21.4 si:ch211-255a21.4 26 1.865 - 1.000 - - - - 0.865 - -
42. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.861 0.906 - - - - 0.955 - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
43. zgc:174697 zgc:174697 128 1.86 - 1.000 - - - 0.860 - - -
44. CABZ01038313.1 CABZ01038313.1 79 1.86 - 1.000 - - - 0.860 - - -
45. slc1a1 ENSDARG00000020212 104 1.859 0.999 - - - - 0.860 - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
46. GADD45G GADD45G 382 1.847 0.847 1.000 - - - - - - -
47. atpv0e2 ENSDARG00000059057 585 1.838 0.894 - - - - 0.944 - - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
48. BX470131.1 BX470131.1 86 1.837 0.874 - - - - 0.963 - - -
49. hecw1 hecw1 241 1.827 - 0.888 - - - 0.939 - - -
50. htr3a ENSDARG00000089212 51 1.821 0.875 - - - - 0.946 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
51. hs3st3l ENSDARG00000059903 184 1.8 0.955 - - - - 0.845 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
52. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.796 - 0.921 - - - 0.875 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
53. C9H2orf69 C9H2orf69 148 1.793 0.890 - - - - 0.903 - - -
54. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.781 - - - - - 0.933 0.848 - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
55. CABZ01029822.1 ENSDARG00000086931 1654 1.779 0.983 0.796 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
56. ndrg4 ENSDARG00000103937 1234 1.779 0.960 - - - - 0.819 - - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
57. ciz1a ENSDARG00000089781 20 1.777 - 1.000 - - - - 0.777 - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
58. zdhhc18a ENSDARG00000069807 8 1.777 - 1.000 - - - - 0.777 - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
59. CABZ01089980.1 ENSDARG00000117446 16 1.777 - 1.000 - - - - 0.777 - -
60. FAM163A ENSDARG00000093021 86 1.771 - 0.950 - - - 0.821 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
61. CR847906.1 ENSDARG00000099493 88 1.77 - 1.000 - - - 0.770 - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
62. helt ENSDARG00000056400 482 1.77 0.874 0.896 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
63. NEFH NEFH 101 1.768 0.978 - - - - - 0.790 - -
64. cacnb4b ENSDARG00000062174 159 1.764 - 0.900 - - - 0.864 - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
65. KCNJ3_1 KCNJ3_1 30 1.76 0.874 - - - - 0.886 - - -
66. TENM2 ENSDARG00000037122 48 1.759 0.759 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
67. cnn1b ENSDARG00000102398 40 1.757 0.874 0.883 - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
68. NRSN2 NRSN2 57 1.754 0.754 1.000 - - - - - - -
69. DLK1 60 1.753 0.874 - - - - 0.879 - - - delta like non-canonical Notch ligand 1
70. CLDN20 26 1.751 0.874 - - - - 0.877 - - - claudin 20, transcript variant X2
71. mapk8ip2 ENSDARG00000063157 467 1.748 - 0.861 - - - 0.887 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
72. kcng1 ENSDARG00000099038 23 1.745 0.874 - - - - 0.871 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
73. si:dkey-21o19.6 si:dkey-21o19.6 18 1.745 - 1.000 - - - 0.745 - - -
74. PARP6 PARP6 119 1.743 0.743 1.000 - - - - - - -
75. ZNF337_18 ZNF337_18 152 1.741 0.844 - - - - 0.897 - - -
76. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.737 0.737 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
77. RGS9BP ENSDARG00000086756 65 1.737 - 1.000 - - - 0.737 - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
78. KCNJ6 ENSDARG00000058985 71 1.735 - 1.000 - - - - 0.735 - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
79. cacna2d3 ENSDARG00000078760 211 1.725 0.829 - - - - 0.896 - - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
80. svilb_1 ENSDARG00000014651 60 1.725 - - - - - 0.740 0.985 - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
81. cnih3 ENSDARG00000014953 25 1.719 0.988 0.731 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
82. zdhhc12b ENSDARG00000052787 43 1.717 0.874 - - - - 0.843 - - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
83. syt11a ENSDARG00000057913 1145 1.712 0.808 - - - - 0.904 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
84. ARX ARX 71 1.712 - 1.000 - - - - 0.712 - -
85. stmn2a ENSDARG00000033234 2272 1.711 0.825 - - - - 0.886 - - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
86. nrn1a ENSDARG00000071860 1311 1.709 0.812 - - - - 0.897 - - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
87. zgc:113307 ENSDARG00000044894 17 1.698 0.874 - - - - 0.824 - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
88. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.697 0.907 - - - - 0.790 - - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
89. aplp1 ENSDARG00000098368 2317 1.696 0.847 - - - - 0.849 - - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
90. TUSC5_1 TUSC5_1 320 1.694 0.769 - - - - 0.925 - - -
91. tmem178 ENSDARG00000020758 77 1.694 0.729 - - - - 0.965 - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
92. CLIP3 ENSDARG00000054456 734 1.693 0.744 - - - - 0.949 - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
93. spock2 ENSDARG00000075393 791 1.69 0.792 - - - - 0.898 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
94. syt13 ENSDARG00000012306 298 1.687 0.749 - - - - 0.938 - - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
95. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.679 0.763 - - - - 0.916 - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
96. eno2 ENSDARG00000014287 2162 1.676 0.833 - - - - 0.843 - - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
97. ENSDARG00000086878 ENSDARG00000086878 332 1.675 0.746 - - - - 0.929 - - -
98. CR388231.1 ENSDARG00000098710 153 1.675 - - - - - 0.926 0.749 - -
99. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.675 0.852 - - - - 0.823 - - -
100. si:ch211-208h1.1 si:ch211-208h1.1 262 1.674 0.846 - - - - 0.828 - - -

There are 2120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA