Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for kcnd3

Gene Name Gene ID Reads Annotation
kcnd3 ENSDARG00000056101 324 potassium voltage-gated channel, Shal-related subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5626]










Genes with expression patterns similar to kcnd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kcnd3 ENSDARG00000056101 324 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 potassium voltage-gated channel, Shal-related subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5626]
2. ROBO3_1 ROBO3_1 468 1.674 0.792 0.882 - - - - - - -
3. fez1 ENSDARG00000023174 701 1.669 0.839 0.830 - - - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
4. si:dkey-100n10.2 101 1.668 0.838 0.830 - - - - - - - si:dkey-100n10.2
5. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.632 0.802 0.830 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
6. CLIP3 ENSDARG00000054456 734 1.628 0.838 0.790 - - - - - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
7. PEG3_30 PEG3_30 60 1.618 0.797 0.821 - - - - - - -
8. kcna1 kcna1 174 1.61 0.780 0.830 - - - - - - -
9. bhlhe22 ENSDARG00000058039 1673 1.599 0.741 0.858 - - - - - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
10. CU459072.2 CU459072.2 322 1.594 - - - - - 0.705 - 0.889 -
11. sv2bb ENSDARG00000060711 196 1.591 - - - - 0.700 - - 0.891 - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
12. sox19b ENSDARG00000040266 532 1.58 0.725 0.855 - - - - - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
13. st6gal1 ENSDARG00000044514 142 1.578 0.748 0.830 - - - - - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
14. MFAP4_7 MFAP4_7 43 1.57 - 0.830 - - 0.740 - - - -
15. lhx5 ENSDARG00000057936 785 1.567 0.737 0.830 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
16. cnih3 ENSDARG00000014953 25 1.548 0.735 0.813 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
17. BX957337.1 BX957337.1 1685 1.546 0.785 0.761 - - - - - - -
18. scg2b ENSDARG00000038574 345 1.542 0.712 0.830 - - - - - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
19. KIF2A_1 ENSDARG00000043571 189 1.539 - 0.830 - - - 0.709 - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
20. elavl4 ENSDARG00000045639 998 1.536 0.735 0.801 - - - - - - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
21. RAPGEF4 ENSDARG00000079872 82 1.532 0.702 0.830 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
22. phf23b ENSDARG00000036305 1073 1.528 0.743 0.785 - - - - - - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
23. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.518 0.734 0.784 - - - - - - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
24. nbr1 nbr1 1161 1.512 0.784 - - - - 0.728 - - -
25. fsd1 ENSDARG00000062017 207 1.505 0.799 0.706 - - - - - - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
26. nek4 ENSDARG00000040152 147 1.479 0.763 - - - - 0.716 - - - NIMA-related kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1392]
27. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.475 0.753 0.722 - - - - - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
28. igf2r ENSDARG00000006094 1578 1.463 - - - - - 0.711 - 0.752 - insulin-like growth factor 2 receptor [Source:ZFIN;Acc:ZDB-GENE-041014-300]
29. FAM171A2 FAM171A2 707 1.453 0.707 0.746 - - - - - - -
30. cadm3 ENSDARG00000057013 1545 1.448 0.746 0.702 - - - - - - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
31. DACT3_1 DACT3_1 1235 1.443 0.733 0.710 - - - - - - -
32. KAT7 KAT7 178 1.432 0.712 - - - - 0.720 - - -
33. thnsl2 ENSDARG00000032584 59 0.938 - 0.938 - - - - - - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
34. tyw3 ENSDARG00000038222 385 0.917 - - - - - - - 0.917 - tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040718-355]
35. rbfox3 rbfox3 1443 0.91 0.910 - - - - - - - -
36. dlg2 ENSDARG00000099323 162 0.906 - 0.906 - - - - - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
37. slc22a7a ENSDARG00000056028 2426 0.906 - 0.906 - - - - - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
38. mcm3_1 ENSDARG00000024204 467 0.903 - 0.903 - - - - - - - minichromosome maintenance complex component 3 [Source:ZFIN;Acc:ZDB-GENE-020419-4]
39. lhfpl4a ENSDARG00000111810 206 0.897 - 0.897 - - - - - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
40. plch2a ENSDARG00000059960 222 0.897 - 0.897 - - - - - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
41. gig2n gig2n 5 0.897 - 0.897 - - - - - - -
42. sc:d217 ENSDARG00000079645 32 0.897 - 0.897 - - - - - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
43. rims2b ENSDARG00000102690 275 0.897 - 0.897 - - - - - - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
44. BX247898.1 BX247898.1 75 0.897 - 0.897 - - - - - - -
45. mfge8a ENSDARG00000015349 66 0.897 - 0.897 - - - - - - - milk fat globule-EGF factor 8 protein a [Source:ZFIN;Acc:ZDB-GENE-050327-9]
46. xkr7 ENSDARG00000026333 18 0.897 - 0.897 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
47. BX936443.2 BX936443.2 28 0.897 - 0.897 - - - - - - -
48. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 0.892 - 0.892 - - - - - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
49. slc45a1 ENSDARG00000004302 152 0.891 - - - - - - - 0.891 - solute carrier family 45, member 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2152]
50. CABZ01111990.1 CABZ01111990.1 4374 0.889 0.889 - - - - - - - -
51. znf512 ENSDARG00000041910 20 0.888 - 0.888 - - - - - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
52. ERMP1_1 ERMP1_1 616 0.886 - - - - - 0.886 - - -
53. syt11a ENSDARG00000057913 1145 0.886 0.886 - - - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
54. gtf2f1 ENSDARG00000032129 3041 0.884 - - - - - - - 0.884 - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
55. kat7 kat7 642 0.883 - - - - - - - 0.883 -
56. pnp4a ENSDARG00000057575 355 0.881 - 0.881 - - - - - - - purine nucleoside phosphorylase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-83]
57. nub1 ENSDARG00000061417 33 0.881 - 0.881 - - - - - - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
58. vipas39 ENSDARG00000103690 280 0.881 - 0.881 - - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
59. ttyh3b ENSDARG00000007678 537 0.88 0.880 - - - - - - - - tweety family member 3b [Source:ZFIN;Acc:ZDB-GENE-051120-105]
60. ppp2r2ba 321 0.879 - 0.879 - - - - - - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
61. FAM120A ENSDARG00000075021 73 0.878 - 0.878 - - - - - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
62. mb21d2a mb21d2a 421 0.875 - 0.875 - - - - - - -
63. runx3 ENSDARG00000052826 247 0.875 0.875 - - - - - - - - runt-related transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]
64. rnf25 ENSDARG00000027182, ENSDARG00000109462, ENSDARG00000114859 246 0.874 - 0.874 - - - - - - - ring finger protein 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1581]
65. slc6a13l 121 0.873 - - - - - 0.873 - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
66. lrrc42 ENSDARG00000030591 156 0.871 - 0.871 - - - - - - - leucine rich repeat containing 42 [Source:ZFIN;Acc:ZDB-GENE-030131-4992]
67. NBL1 428 0.87 - 0.870 - - - - - - - neuroblastoma 1, DAN family BMP antagonist
68. TUBB8P7 TUBB8P7 1353 0.868 0.868 - - - - - - - -
69. MAP1A MAP1A 847 0.867 0.867 - - - - - - - -
70. nrxn2b ENSDARG00000063150 343 0.866 0.866 - - - - - - - - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
71. PPP1R1B ENSDARG00000076280 352 0.865 - - - - - 0.865 - - - protein phosphatase 1, regulatory (inhibitor) subunit 1B [Source:ZFIN;Acc:ZDB-GENE-120126-1]
72. tubb5 ENSDARG00000037997 18691 0.863 0.863 - - - - - - - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
73. NOG NOG 324 0.863 - - - - - - - 0.863 -
74. scn8aa ENSDARG00000005775 792 0.863 0.863 - - - - - - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
75. zfand4 ENSDARG00000076703, ENSDARG00000109957 411 0.862 - - - - - - - 0.862 - zinc finger, AN1-type domain 4 [Source:ZFIN;Acc:ZDB-GENE-090312-102]
76. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 0.857 - 0.857 - - - - - - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
77. CASKIN1 ENSDARG00000046107 201 0.856 - - - - - - - 0.856 - CASK interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-071115-3]
78. iqgap2 ENSDARG00000060010 494 0.855 - - - - - 0.855 - - - IQ motif containing GTPase activating protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2878]
79. ext1a ENSDARG00000103155 336 0.855 - 0.855 - - - - - - - exostosin glycosyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050211-3]
80. gap43 ENSDARG00000099744 4114 0.853 0.853 - - - - - - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
81. mier2 ENSDARG00000071413 789 0.85 0.850 - - - - - - - - mesoderm induction early response 1, family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-795]
82. PMF1 PMF1 1172 0.849 - - - - - - 0.849 - -
83. stmn2b ENSDARG00000070537 1586 0.849 0.849 - - - - - - - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
84. C17H15orf41 C17H15orf41 313 0.848 - 0.848 - - - - - - -
85. mitfa ENSDARG00000003732 1288 0.848 - 0.848 - - - - - - - microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]
86. hepacam2 ENSDARG00000061365, ENSDARG00000109776 219 0.847 - - - - - 0.847 - - - HEPACAM family member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-135]
87. havcr1 ENSDARG00000040178 73 0.845 - - - - - 0.845 - - - hepatitis A virus cellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-131]
88. CABZ01054396.1 CABZ01054396.1 139 0.845 - 0.845 - - - - - - -
89. TUBB8P7_1 TUBB8P7_1 2722 0.842 0.842 - - - - - - - -
90. TMEM138 ENSDARG00000090543 105 0.842 - - - - - 0.842 - - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
91. rusc1 ENSDARG00000078125 617 0.842 0.842 - - - - - - - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
92. gpn3 ENSDARG00000069525 499 0.841 - 0.841 - - - - - - - GPN-loop GTPase 3 [Source:ZFIN;Acc:ZDB-GENE-040724-141]
93. si:ch211-152f6.6 si:ch211-152f6.6 278 0.84 0.840 - - - - - - - -
94. clcn6 ENSDARG00000032577 174 0.84 - 0.840 - - - - - - - chloride channel 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2056]
95. SYT2 ENSDARG00000014169 265 0.84 0.840 - - - - - - - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
96. parpbp ENSDARG00000029944 316 0.839 0.839 - - - - - - - - PARP1 binding protein [Source:ZFIN;Acc:ZDB-GENE-060421-5714]
97. ikbkb ENSDARG00000079123 498 0.839 - - - - - 0.839 - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
98. sh3bp5b ENSDARG00000103978 513 0.839 - - - - - - - 0.839 - SH3-domain binding protein 5b (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2813]
99. BX511021.3 ENSDARG00000117414 592 0.838 0.838 - - - - - - - -
100. stmn1b ENSDARG00000033655 9491 0.838 0.838 - - - - - - - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]

There are 1131 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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