Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for kcnd1

Gene Name Gene ID Reads Annotation
kcnd1 ENSDARG00000074746 153 potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]










Genes with expression patterns similar to kcnd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kcnd1 ENSDARG00000074746 153 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
2. evx2 ENSDARG00000059255 317 2.8 0.918 - - - - 0.918 0.964 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
3. INA INA 950 2.712 0.897 - - - - 0.861 0.954 - -
4. dbx2 2971 2.696 0.900 - - - - 0.956 0.840 - - developing brain homeobox 2
5. necab2 ENSDARG00000056745, ENSDARG00000110976 304 2.665 0.765 - - - - 0.923 0.977 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
6. GJD2_1 GJD2_1 3045 2.648 0.979 - - - - 0.822 0.847 - -
7. sypb ENSDARG00000002230 262 2.639 0.836 - - - - 0.910 0.893 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
8. scn8aa ENSDARG00000005775 792 2.638 0.878 - - - - 0.843 0.917 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
9. nefmb ENSDARG00000043697 2052 2.637 0.905 - - - - 0.943 0.789 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
10. fgf13b ENSDARG00000056633 455 2.612 0.792 - - - - 0.908 0.912 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
11. ntrk2a ENSDARG00000059897 185 2.607 0.857 - - - - 0.868 0.882 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
12. elavl4 ENSDARG00000045639 998 2.594 0.854 - - - - 0.952 0.788 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
13. pax6a ENSDARG00000103379 3061 2.59 0.792 - - - - 0.864 0.934 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
14. ppp2r2c ppp2r2c 441 2.589 0.811 - - - - 0.837 0.941 - -
15. TUBB8P7_2 TUBB8P7_2 565 2.579 0.812 - - - - 0.914 0.853 - -
16. neto1l ENSDARG00000071596 57 2.572 0.801 - - - - 0.771 1.000 - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
17. SPOCK1 ENSDARG00000074644 794 2.566 0.877 - - - - 0.939 0.750 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
18. gsx1 ENSDARG00000035735 1243 2.566 0.792 - - - - 0.919 0.855 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
19. tlx2 ENSDARG00000011273 870 2.562 0.811 - - - - 0.902 0.849 - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
20. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.56 0.930 - - - - 0.792 0.838 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
21. SKOR2 SKOR2 1041 2.545 0.862 - - - - 0.729 0.954 - -
22. syt4 ENSDARG00000036505 421 2.539 0.737 - - - - 0.851 0.951 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
23. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.522 0.925 - - - - 0.716 0.881 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
24. cdk5r1b ENSDARG00000045087 2075 2.515 0.757 - - - - 0.881 0.877 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
25. gpr173 ENSDARG00000042922 238 2.509 0.702 - - - - 0.832 0.975 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
26. scn2b ENSDARG00000101713 796 2.508 0.862 - - - - 0.896 0.750 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
27. slco4a1 ENSDARG00000075948 74 2.508 0.803 - - - - 0.730 0.975 - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
28. CAMSAP3 ENSDARG00000059475 263 2.504 0.949 - - - - 0.820 0.735 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
29. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.489 0.773 - - - - 0.814 0.902 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
30. fstl5 ENSDARG00000040198 213 2.488 0.803 - - - - 0.910 0.775 - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
31. si:ch211-152f6.6 si:ch211-152f6.6 278 2.487 0.873 - - - - 0.725 0.889 - -
32. gng3 ENSDARG00000009553 2530 2.485 0.797 - - - - 0.908 0.780 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
33. APBB3 ENSDARG00000053771 654 2.482 0.937 - - - - 0.810 0.735 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
34. nbeaa ENSDARG00000070080 862 2.482 0.769 - - - - 0.839 0.874 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
35. sncgb ENSDARG00000109715 1014 2.482 0.897 - - - - 0.701 0.884 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
36. stx1b ENSDARG00000000503 2724 2.473 0.775 - - - - 0.825 0.873 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
37. map1aa ENSDARG00000059601 599 2.472 0.814 - - - - 0.936 0.722 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
38. rusc1 ENSDARG00000078125 617 2.472 0.796 - - - - 0.882 0.794 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
39. stmn2b ENSDARG00000070537 1586 2.471 0.819 - - - - 0.778 0.874 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
40. jag1a ENSDARG00000030289 1275 2.463 0.830 - - - - 0.774 0.859 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
41. dnajc5aa ENSDARG00000042948 2885 2.449 0.720 - - - - 0.937 0.792 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
42. sox19b ENSDARG00000040266 532 2.446 0.872 - - - - 0.850 0.724 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
43. BSN BSN 463 2.443 0.785 - - - - 0.920 0.738 - -
44. pou4f1 ENSDARG00000005559 821 2.442 0.841 - - - - 0.798 0.803 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
45. cadm3 ENSDARG00000057013 1545 2.434 0.767 - - - - 0.762 0.905 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
46. bhlhe22 ENSDARG00000058039 1673 2.426 0.836 - - - - 0.814 0.776 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
47. b3gat2 ENSDARG00000030733 348 2.409 0.864 - - - - 0.772 0.773 - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
48. slc1a2b ENSDARG00000102453 3136 2.406 0.723 - - - - 0.795 0.888 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
49. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.394 0.767 - - - - 0.748 0.879 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
50. snap25b ENSDARG00000058117 469 2.388 0.773 - - - - 0.748 0.867 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
51. tmem229b ENSDARG00000060569 516 2.382 0.845 - - - - 0.718 0.819 - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
52. syngr3a ENSDARG00000014871 405 2.381 0.721 - - - - 0.905 0.755 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
53. TUBB8P7_1 TUBB8P7_1 2722 2.359 0.866 - - - - 0.786 0.707 - -
54. sh3gl2 sh3gl2 1305 2.358 0.730 - - - - 0.734 0.894 - -
55. rab3ab ENSDARG00000043835 1267 2.358 0.789 - - - - 0.742 0.827 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
56. cacna1da ENSDARG00000102773 114 2.358 0.890 - - - - 0.724 0.744 - - calcium channel, voltage-dependent, L type, alpha 1D subunit, a [Source:ZFIN;Acc:ZDB-GENE-030616-135]
57. map7d2a ENSDARG00000068480 513 2.331 0.729 - - - - 0.839 0.763 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
58. ndrg4 ENSDARG00000103937 1234 2.323 0.729 - - - - 0.706 0.888 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
59. her2 ENSDARG00000038205 3219 2.308 0.722 - - - - 0.808 0.778 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
60. gap43 ENSDARG00000099744 4114 2.298 0.778 - - - - 0.740 0.780 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
61. snap25a ENSDARG00000020609 4537 2.294 0.721 - - - - 0.754 0.819 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
62. nadl1.1 1200 2.289 0.818 - - - - 0.769 0.702 - - neural adhesion molecule L1.1, transcript variant X1
63. mir219-1 101 2.286 0.803 - - - - 0.707 0.776 - - microRNA 219-1
64. atp6v0cb ENSDARG00000036577 3472 2.285 0.764 - - - - 0.743 0.778 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
65. PDZD4 ENSDARG00000090564 131 2.268 0.756 - - - - 0.739 0.773 - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
66. zic2a ENSDARG00000015554 2860 2.168 0.706 - - - - 0.731 0.731 - - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
67. fez1 ENSDARG00000023174 701 1.905 0.944 - - - - - 0.961 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
68. mir124-6 64 1.893 0.918 - - - - - 0.975 - - microRNA 124-6
69. BX571949.1 BX571949.1 293 1.89 0.923 - - - - - 0.967 - -
70. SAMD14 145 1.881 - - - - - 0.922 0.959 - - sterile alpha motif domain containing 14, transcript variant X3
71. FGFBP3 FGFBP3 993 1.876 - - - - - 0.939 0.937 - -
72. dtnbp1b ENSDARG00000055206 64 1.876 - - - - - 0.948 0.928 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
73. KLF8 ENSDARG00000060661 219 1.865 - - - 0.890 - - 0.975 - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
74. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.853 - - - - - 0.868 0.985 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
75. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.843 - - - - - 0.906 0.937 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
76. prdm14 ENSDARG00000045371 106 1.838 - - - - - 0.863 0.975 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
77. SMARCA4 ENSDARG00000104339 48 1.837 - - - - - 0.862 0.975 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
78. slc1a1 ENSDARG00000020212 104 1.817 0.842 - - - - - 0.975 - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
79. clstn3 ENSDARG00000073883 590 1.815 - - - - - 0.879 0.936 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
80. mb21d2a mb21d2a 421 1.81 - - - - - 0.891 0.919 - -
81. pdzd4 175 1.808 - - - - - 0.878 0.930 - - PDZ domain containing 4, transcript variant X2
82. tmem178b ENSDARG00000006747 173 1.808 - - - - - 0.861 0.947 - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
83. si:dkey-193c22.1 ENSDARG00000093687 104 1.805 - - - - - 0.830 0.975 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
84. xkr6 xkr6 286 1.803 0.803 - - - - - 1.000 - -
85. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.791 - - - - - 0.902 0.889 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
86. tmcc2 ENSDARG00000046007 148 1.791 - - - - - 0.874 0.917 - - transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]
87. rbfox3 rbfox3 1443 1.788 - - - - - 0.886 0.902 - -
88. slc8a2b ENSDARG00000100592 598 1.787 - - - - - 0.941 0.846 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
89. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.786 0.938 - - - - - 0.848 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
90. PRKAR2B ENSDARG00000036446 812 1.779 - - - - - 0.902 0.877 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
91. si:ch211-117m20.4 ENSDARG00000094286 7 1.778 0.803 - - - - - 0.975 - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
92. BX530409.1 BX530409.1 65 1.778 0.803 - - - - - 0.975 - -
93. glcea ENSDARG00000005095 33 1.778 0.803 - - - - - 0.975 - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
94. VSTM5 4 1.778 0.803 - - - - - 0.975 - - V-set and transmembrane domain containing 5
95. VOPP1_1 VOPP1_1 73 1.778 0.803 - - - - - 0.975 - -
96. rassf4 ENSDARG00000012460 43 1.778 0.803 - - - - - 0.975 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
97. syt9a ENSDARG00000003994 298 1.777 0.890 - - - - - 0.887 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
98. EPB41L1 EPB41L1 1896 1.776 - - - - - 0.891 0.885 - -
99. bai3 bai3 92 1.775 - - - - - 0.874 0.901 - -
100. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.774 - - - - - 0.875 0.899 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]

There are 1622 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA