Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for kcnc1a

Gene Name Gene ID Reads Annotation
kcnc1a ENSDARG00000051852 317 potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]










Genes with expression patterns similar to kcnc1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kcnc1a ENSDARG00000051852 317 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
2. BX511006.2 BX511006.2 29 1.76 0.862 - - - - - - 0.898 -
3. GFRAL ENSDARG00000089709 167 1.705 - - - - - 0.833 - 0.872 - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
4. LSM5 ENSDARG00000071573 371 1.691 - 0.789 - - - - - 0.902 - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
5. MAPK8IP1_1 MAPK8IP1_1 186 1.685 0.821 0.864 - - - - - - -
6. tmem180 tmem180 430 1.684 - - - - - - 0.800 0.884 -
7. SV2B SV2B 208 1.68 0.847 - - - - - - 0.833 -
8. CPNE4 CPNE4 268 1.665 0.892 - - - - 0.773 - - -
9. slc5a3a ENSDARG00000010376 134 1.641 - - - - - - 0.756 0.885 - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
10. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 1.64 - - - - - 0.735 - 0.905 - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
11. glb1 ENSDARG00000036415 80 1.63 - - - - - 0.743 0.887 - - galactosidase, beta 1 [Source:ZFIN;Acc:ZDB-GENE-050410-9]
12. rab6ba ENSDARG00000034522 495 1.628 0.888 - - - - - 0.740 - - RAB6B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-136]
13. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.605 0.867 0.738 - - - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
14. hpse ENSDARG00000063634, ENSDARG00000112827 35 1.591 0.787 - - - - 0.804 - - - heparanase [Source:ZFIN;Acc:ZDB-GENE-041111-200]
15. wnt9a ENSDARG00000063437 204 1.581 - - - - - - 0.719 0.862 - wingless-type MMTV integration site family, member 9A [Source:ZFIN;Acc:ZDB-GENE-060825-97]
16. dlg1 ENSDARG00000009677 706 1.579 0.765 - - - - - - 0.814 - discs, large homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010724-8]
17. cog4 ENSDARG00000054264 785 1.57 - - - - - - 0.758 0.812 - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
18. dpysl3 ENSDARG00000002587 4381 1.549 0.760 0.789 - - - - - - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
19. cdk15 ENSDARG00000006093 252 1.546 - 0.771 - - - 0.775 - - - cyclin-dependent kinase 15 [Source:ZFIN;Acc:ZDB-GENE-060421-7193]
20. CABZ01070258.1 ENSDARG00000105687 3643 1.53 0.736 0.794 - - - - - - -
21. CCDC61 ENSDARG00000062307 582 1.518 0.715 - - - - - - 0.803 - coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
22. fbxo5 ENSDARG00000039020 1284 1.515 - 0.786 - - - 0.729 - - - F-box protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4027]
23. mitfa ENSDARG00000003732 1288 1.504 0.729 - - - - 0.775 - - - microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]
24. GPR17 ENSDARG00000062030 713 1.498 0.784 0.714 - - - - - - - G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
25. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.491 0.750 - - - - 0.741 - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
26. zgc:171901 ENSDARG00000074365 129 1.483 0.723 - - - - 0.760 - - - zgc:171901 [Source:ZFIN;Acc:ZDB-GENE-080220-13]
27. asap1b ENSDARG00000039729 842 1.476 - 0.726 - - - - - 0.750 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b [Source:ZFIN;Acc:ZDB-GENE-091112-16]
28. tmem130 ENSDARG00000103789 756 1.474 0.726 - - - - 0.748 - - - transmembrane protein 130 [Source:ZFIN;Acc:ZDB-GENE-080204-23]
29. opn5 ENSDARG00000070110 18 1.472 0.713 - - - - 0.759 - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
30. BX539313.4 BX539313.4 1858 1.462 0.749 - - - - 0.713 - - -
31. ssbp3a ENSDARG00000058237 87 1.46 - - - - - 0.723 0.737 - - single stranded DNA binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-070705-484]
32. RPS11 ENSDARG00000053058 32 1.455 0.713 - - - - 0.742 - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
33. C12H10orf90 C12H10orf90 143 0.981 0.981 - - - - - - - -
34. GAS2L1 ENSDARG00000078803 315 0.944 - - - - - - 0.944 - - growth arrest-specific 2 like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-38]
35. CU179656.1 ENSDARG00000107086 270 0.943 0.943 - - - - - - - -
36. slc38a6 ENSDARG00000054312 112 0.937 - 0.937 - - - - - - - solute carrier family 38, member 6 [Source:ZFIN;Acc:ZDB-GENE-050522-51]
37. mir219-3 46 0.936 0.936 - - - - - - - - microRNA 219-3
38. CABZ01030094.1 CABZ01030094.1 98 0.936 0.936 - - - - - - - -
39. tmem178 ENSDARG00000020758 77 0.936 0.936 - - - - - - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
40. papd7 263 0.931 0.931 - - - - - - - - PAP associated domain containing 7, transcript variant X2
41. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 0.929 0.929 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
42. GPR158 GPR158 64 0.926 0.926 - - - - - - - -
43. gba2 ENSDARG00000061472 171 0.926 - - - - - 0.926 - - - glucosidase, beta (bile acid) 2 [Source:ZFIN;Acc:ZDB-GENE-070522-3]
44. PDZD4 ENSDARG00000090564 131 0.921 0.921 - - - - - - - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
45. asic4a ENSDARG00000025162 25 0.921 0.921 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
46. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.921 0.921 - - - - - - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
47. rfwd2 740 0.919 - - - - - - - 0.919 - ring finger and WD repeat domain 2, transcript variant X1
48. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 0.918 0.918 - - - - - - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
49. scaper ENSDARG00000023104 491 0.917 - - - - - - - 0.917 - S-phase cyclin A-associated protein in the ER [Source:ZFIN;Acc:ZDB-GENE-060303-5]
50. ENSDARG00000023499 ENSDARG00000023499 395 0.916 - 0.916 - - - - - - -
51. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.914 - - - - - - - 0.914 - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
52. ZNF362 ZNF362 638 0.914 - - - - - - - 0.914 -
53. npb ENSDARG00000078828 230 0.912 0.912 - - - - - - - - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
54. atrip ENSDARG00000063076 385 0.911 - - - - - - - 0.911 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
55. zgc:171673 ENSDARG00000102473 256 0.911 - - - - - 0.911 - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
56. ZBTB8A ENSDARG00000059226 98 0.909 - - - - - - - 0.909 - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
57. rab1bb ENSDARG00000056479, ENSDARG00000109723 551 0.907 - - - - - - - 0.907 - RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]
58. entpd3 ENSDARG00000035309 263 0.906 0.906 - - - - - - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
59. trmt5 ENSDARG00000069278 228 0.906 - - - - - - - 0.906 - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
60. cdk5r2a ENSDARG00000071011 167 0.906 0.906 - - - - - - - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
61. ENSDARG00000076021 ENSDARG00000076021 162 0.906 - - - - - - 0.906 - -
62. CPNE8_1 CPNE8_1 140 0.906 - - - - - - - 0.906 -
63. nphp4 ENSDARG00000069014 77 0.905 - - - - - - - 0.905 - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
64. gadd45ab ENSDARG00000104571, ENSDARG00000110532 770 0.905 - - - - - - - 0.905 - growth arrest and DNA-damage-inducible, alpha, b [Source:ZFIN;Acc:ZDB-GENE-040704-60]
65. usp8 ENSDARG00000063719 643 0.904 - - - - - - - 0.904 - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
66. si:dkey-238g7.2 si:dkey-238g7.2 181 0.904 - - - - - - - 0.904 -
67. tlx2 ENSDARG00000011273 870 0.904 0.904 - - - - - - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
68. chkb ENSDARG00000063167 440 0.903 - - - - - - - 0.903 - choline kinase beta [Source:ZFIN;Acc:ZDB-GENE-030131-2928]
69. wnt11r ENSDARG00000014796 2860 0.903 0.903 - - - - - - - - wingless-type MMTV integration site family, member 11, related [Source:ZFIN;Acc:ZDB-GENE-980526-249]
70. zgc:158254 ENSDARG00000071233 265 0.903 - 0.903 - - - - - - - zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
71. mob3c ENSDARG00000043705 306 0.903 - - - - - - - 0.903 - MOB kinase activator 3C [Source:ZFIN;Acc:ZDB-GENE-040704-32]
72. zgc:109744 ENSDARG00000070800 262 0.902 - - - - - - - 0.902 - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
73. nlgn1 ENSDARG00000077710 72 0.902 - - - - - - - 0.902 - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
74. bcl3 ENSDARG00000087832 69 0.9 - - - - - - - 0.900 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
75. CABZ01078431.1 CABZ01078431.1 183 0.9 - - - - - - - 0.900 -
76. lrriq1 ENSDARG00000093781 83 0.9 - - - - - - - 0.900 - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
77. CT573468.1 CT573468.1 283 0.899 - - - - - - - 0.899 -
78. adam23a ENSDARG00000062323 580 0.899 0.899 - - - - - - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
79. ba1 69 0.899 - - - - - - - 0.899 - ba1 globin
80. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.899 - - - - - - - 0.899 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
81. ASPH ENSDARG00000055945 214 0.899 - - - - - - - 0.899 - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
82. KIF21B ENSDARG00000009733 53 0.899 - - - - - - - 0.899 - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
83. nmt2 ENSDARG00000021808 510 0.899 - - - - - - - 0.899 - N-myristoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-717]
84. slc2a15b ENSDARG00000053269 899 0.898 - - - - - - - 0.898 - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
85. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.898 - - - - - - - 0.898 - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
86. tmem163a ENSDARG00000079858, ENSDARG00000116870 677 0.896 - - - - - 0.896 - - - transmembrane protein 163a [Source:ZFIN;Acc:ZDB-GENE-081104-429]
87. lhx5 ENSDARG00000057936 785 0.896 0.896 - - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
88. zgc:171459 ENSDARG00000077248 224 0.895 - - - - - - - 0.895 - zgc:171459 [Source:ZFIN;Acc:ZDB-GENE-030131-2059]
89. GABRR1 ENSDARG00000043902 71 0.895 - - - - - - - 0.895 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
90. MAL2 ENSDARG00000077637 152 0.895 - - - - - - - 0.895 - mal, T cell differentiation protein 2 (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-081022-204]
91. nmnat2 ENSDARG00000004580 370 0.894 0.894 - - - - - - - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
92. si:ch1073-174d20.2 ENSDARG00000079651 171 0.894 - - - - - - - 0.894 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
93. dck ENSDARG00000044807 510 0.893 - - - - - - - 0.893 - deoxycytidine kinase [Source:ZFIN;Acc:ZDB-GENE-041024-3]
94. rab34b ENSDARG00000010977 590 0.893 - - - - - - - 0.893 - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
95. tmprss13b ENSDARG00000077573 47 0.893 - - - - - - - 0.893 - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
96. zc3h10 ENSDARG00000030335 236 0.892 - - - - - - - 0.892 - zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
97. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.892 - - - - - - - 0.892 - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
98. cacng2a ENSDARG00000032565 99 0.892 - - - - - - - 0.892 - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
99. srd5a2a ENSDARG00000043587 21 0.892 - - - - - - - 0.892 - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
100. THEM6_1 ENSDARG00000103914 469 0.892 - - - - - - - 0.892 - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]

There are 1218 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA