Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for kars

Gene Name Gene ID Reads Annotation
kars ENSDARG00000103799 20937 lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]










Genes with expression patterns similar to kars

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kars ENSDARG00000103799 20937 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]
2. cnbpa ENSDARG00000045776 8648 2.489 0.793 0.916 0.780 - - - - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
3. btf3 ENSDARG00000035400, ENSDARG00000116462 147506 2.244 0.736 0.757 - 0.751 - - - - - basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
4. cox6a1 ENSDARG00000022438 18811 2.237 0.757 - 0.762 0.718 - - - - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
5. rps26 ENSDARG00000037071 40061 1.915 - 0.921 - - - - 0.994 - - ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
6. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 1.864 0.866 - - - - - 0.998 - - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
7. actn3b ENSDARG00000001431 15747 1.86 0.871 - - - - - 0.989 - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
8. murca murca 6614 1.824 0.832 - - - - - 0.992 - -
9. neb ENSDARG00000032630, ENSDARG00000109273 19493 1.794 0.798 - - - - - 0.996 - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
10. rps29 ENSDARG00000041232 71334 1.785 0.796 - - - - - 0.989 - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
11. NAT16 ENSDARG00000086222 4682 1.744 0.839 0.905 - - - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
12. sucla2 ENSDARG00000005359 5992 1.732 0.735 - - - - - 0.997 - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
13. METTL21C METTL21C 1717 1.708 0.802 0.906 - - - - - - -
14. cct5 ENSDARG00000045399 11572 1.698 0.903 - 0.795 - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
15. atp5f1 16797 1.691 - 0.931 - 0.760 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
16. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 1.687 0.719 - - - - - 0.968 - - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
17. hars ENSDARG00000003693 7217 1.676 0.797 0.879 - - - - - - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
18. atp5g3a 9539 1.673 0.742 0.931 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
19. casq2 ENSDARG00000008982 21802 1.667 0.884 - - - - - 0.783 - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
20. mrpl54 ENSDARG00000071468 2715 1.659 0.769 0.890 - - - - - - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
21. mibp2 ENSDARG00000101844 17444 1.637 0.838 - 0.799 - - - - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
22. nhp2l1b nhp2l1b 3898 1.633 0.726 0.907 - - - - - - -
23. sdha ENSDARG00000016721 8255 1.63 0.764 - - - - - - 0.866 - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
24. ndufa1 ENSDARG00000036329, ENSDARG00000111888 18361 1.627 - 0.923 - 0.704 - - - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:ZFIN;Acc:ZDB-GENE-040625-168]
25. ndufb9 ENSDARG00000041314, ENSDARG00000112557 15434 1.612 0.742 0.870 - - - - - - - NADH:ubiquinone oxidoreductase subunit B9 [Source:ZFIN;Acc:ZDB-GENE-030131-8364]
26. cox6b2 ENSDARG00000037860 33134 1.607 0.790 - - - 0.817 - - - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
27. ptrfa ptrfa 4363 1.588 0.819 - - - - - 0.769 - -
28. chac1 ENSDARG00000070426 17552 1.586 - 0.884 - 0.702 - - - - - ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]
29. EIF4G1 EIF4G1 19676 1.576 0.800 - 0.776 - - - - - -
30. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.574 0.846 - - 0.728 - - - - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
31. eif3i ENSDARG00000017445 21149 1.569 0.810 - - - 0.759 - - - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
32. phb ENSDARG00000057414 9551 1.558 0.813 - 0.745 - - - - - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
33. aimp1 ENSDARG00000060036 5343 1.514 0.807 - - 0.707 - - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
34. ndufs3 ENSDARG00000015385 7790 1.512 0.792 - - 0.720 - - - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
35. ola1 ENSDARG00000044565 22424 1.51 0.787 - - - 0.723 - - - - Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
36. rpl5a ENSDARG00000020197 35209 1.506 0.764 - - - - - 0.742 - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
37. rpl38 ENSDARG00000006413 59590 1.503 0.724 0.779 - - - - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
38. rps28 ENSDARG00000035860 34765 1.488 0.703 - - - 0.785 - - - - ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]
39. eif3c ENSDARG00000016443 18003 1.483 0.723 - 0.760 - - - - - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
40. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.476 0.767 - - 0.709 - - - - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
41. pfdn1 ENSDARG00000014536 6969 1.426 0.725 - - - - - - - 0.701 prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]
42. tmem47 ENSDARG00000057322 4691 1.424 0.717 - - - 0.707 - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
43. hp1bp3 ENSDARG00000044669 23708 0.998 - - - - - - 0.998 - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
44. matn3a ENSDARG00000069245 2410 0.997 - - - - - - 0.997 - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
45. C7H16orf87 C7H16orf87 5197 0.997 - - - - - - 0.997 - -
46. slc22a7a ENSDARG00000056028 2426 0.997 - - - - - - 0.997 - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
47. hes6 ENSDARG00000019335 4754 0.996 - - - - - - 0.996 - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
48. tmem5 1630 0.996 - - - - - - 0.996 - - transmembrane protein 5
49. cers2a ENSDARG00000013704 4239 0.996 - - - - - - 0.996 - - ceramide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020808-2]
50. XPR1 XPR1 3354 0.996 - - - - - - 0.996 - -
51. si:dkey-42p8.3 1117 0.996 - - - - - - 0.996 - - si:dkey-42p8.3, transcript variant X1
52. pdlim4 ENSDARG00000068973 2567 0.996 - - - - - - 0.996 - - PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
53. CR293507.1 ENSDARG00000112572 3198 0.996 - - - - - - 0.996 - -
54. twf1a ENSDARG00000115712 3465 0.996 - - - - - - 0.996 - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
55. smurf2 ENSDARG00000038067 2057 0.996 - - - - - - 0.996 - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
56. csrp1a ENSDARG00000006603 5188 0.996 - - - - - - 0.996 - - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
57. VMA21 ENSDARG00000093945, ENSDARG00000113532 7555 0.996 - - - - - - 0.996 - - VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081104-272]
58. RB1CC1 ENSDARG00000076559 2771 0.996 - - - - - - 0.996 - - RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
59. acat2 ENSDARG00000007127 3052 0.996 - - - - - - 0.996 - - acetyl-CoA acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-990714-22]
60. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 0.996 - - - - - - 0.996 - - AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
61. rnf20 ENSDARG00000016664 3641 0.996 - - - - - - 0.996 - - ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
62. st14a ENSDARG00000061173 3800 0.995 - - - - - - 0.995 - - suppression of tumorigenicity 14 (colon carcinoma) a [Source:ZFIN;Acc:ZDB-GENE-030131-6496]
63. epdl1 ENSDARG00000076386 1747 0.994 - - - - - - 0.994 - - ependymin-like 1 [Source:ZFIN;Acc:ZDB-GENE-090710-3]
64. SAMD4A ENSDARG00000075759 3282 0.994 - - - - - - 0.994 - - sterile alpha motif domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-070720-7]
65. si:ch211-166a6.5 ENSDARG00000079745 11111 0.993 - - - - - - 0.993 - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
66. COL2A1 COL2A1 18161 0.992 - - - - - - 0.992 - -
67. serp1 ENSDARG00000099439 23682 0.99 - - - - - - 0.990 - - stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
68. pmp22b ENSDARG00000060457 20406 0.96 - 0.960 - - - - - - - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
69. tgfbi ENSDARG00000071586 17779 0.941 - 0.941 - - - - - - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
70. mgea5 6076 0.928 - 0.928 - - - - - - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X2
71. asph ENSDARG00000055945 10835 0.919 - 0.919 - - - - - - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
72. si:ch1073-429i10.3 75111 0.912 - - - - - - 0.912 - - si:ch1073-429i10.3, transcript variant X2
73. impdh1b ENSDARG00000029524 7472 0.911 - - - - - - 0.911 - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
74. fgg ENSDARG00000037281, ENSDARG00000114705 10817 0.909 - - - - - - 0.909 - - fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
75. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 61276 0.909 - - - - - - 0.909 - - ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
76. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 0.909 - 0.909 - - - - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
77. CABZ01111496.1 ENSDARG00000003041 15566 0.908 - - - - - - 0.908 - - E3 ubiquitin-protein ligase pellino homolog 2-like [Source:NCBI gene;Acc:100334245]
78. cox4i1 ENSDARG00000032970 53784 0.907 - - - - - - 0.907 - - cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
79. rbb4 rbb4 15541 0.906 - 0.906 - - - - - - -
80. arih2 ENSDARG00000012848 7087 0.905 - 0.905 - - - - - - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
81. dhx15 ENSDARG00000015392 7496 0.905 - 0.905 - - - - - - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
82. tmem161a ENSDARG00000012790 16094 0.905 0.905 - - - - - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
83. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 0.903 0.903 - - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
84. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 0.902 - 0.902 - - - - - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
85. ckmt1 ENSDARG00000016598, ENSDARG00000113143 15024 0.899 - - - - - - 0.899 - - creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
86. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 0.899 0.899 - - - - - - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
87. igf2bp3 ENSDARG00000010266 5789 0.898 - 0.898 - - - - - - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
88. tomm7 ENSDARG00000067717 4452 0.896 - 0.896 - - - - - - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
89. snx12 ENSDARG00000019060 9563 0.894 - 0.894 - - - - - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
90. rtn2a ENSDARG00000016088 12184 0.893 0.893 - - - - - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
91. nsa2 ENSDARG00000007708 6329 0.893 - 0.893 - - - - - - - NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
92. pygma ENSDARG00000055518 15972 0.893 0.893 - - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
93. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.892 - 0.892 - - - - - - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
94. srsf5b ENSDARG00000027734 6996 0.892 - 0.892 - - - - - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
95. myh10 ENSDARG00000000103 7522 0.891 - 0.891 - - - - - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
96. vbp1 ENSDARG00000030241 10619 0.886 0.886 - - - - - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
97. txlnbb ENSDARG00000076241 6396 0.885 0.885 - - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
98. rplp0 ENSDARG00000051783 88740 0.885 0.885 - - - - - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
99. nexn ENSDARG00000057317 10972 0.883 0.883 - - - - - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
100. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 0.883 - 0.883 - - - - - - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]

There are 606 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA