Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for jph3

Gene Name Gene ID Reads Annotation
jph3 ENSDARG00000102204 175 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]










Genes with expression patterns similar to jph3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. jph3 ENSDARG00000102204 175 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
2. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 3.486 - 1.000 - - - 0.804 0.846 - 0.836 immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
3. sv2bb ENSDARG00000060711 196 3.185 0.770 0.822 - - - 0.737 0.856 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
4. CHL1 CHL1 1553 2.956 - 0.723 - - - 0.722 0.701 - 0.810
5. FUT9 FUT9 91 2.835 - 1.000 - - - 0.886 0.949 - -
6. nrxn3b ENSDARG00000062693 192 2.741 0.836 - - - - - 0.925 - 0.980 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
7. kif5c ENSDARG00000076027 424 2.674 - - - - - 0.787 0.927 - 0.960 kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
8. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 2.667 - 0.943 - - - - 0.743 - 0.981 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
9. ncam2 ENSDARG00000017466 175 2.666 0.812 - - - - - 0.868 - 0.986 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
10. sox12 ENSDARG00000025847 681 2.656 0.854 1.000 - - - - - - 0.802 SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
11. cacng3b ENSDARG00000076401 91 2.628 - 1.000 - - - 0.784 0.844 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
12. NTRK3 NTRK3 163 2.627 0.853 1.000 - - - - 0.774 - -
13. gng3 ENSDARG00000009553 2530 2.59 0.775 0.929 - - - - 0.886 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
14. NPAS3 ENSDARG00000109820 362 2.577 0.786 1.000 - - - 0.791 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
15. gad2 ENSDARG00000015537 724 2.548 - 0.830 - - - - 0.864 - 0.854 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
16. gnb5b ENSDARG00000055377 98 2.507 0.816 0.898 - - - - 0.793 - - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
17. rbfox3 rbfox3 1443 2.489 - 0.833 - - - - 0.800 - 0.856
18. LMTK3 LMTK3 222 2.477 0.858 - - - - 0.868 0.751 - -
19. slc17a6b ENSDARG00000041150 823 2.475 0.728 1.000 - - - - 0.747 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
20. GJD2_1 GJD2_1 3045 2.465 - 1.000 - - - 0.765 0.700 - -
21. chrna2a ENSDARG00000006602 163 2.463 0.735 - - - - 0.784 0.944 - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]
22. nkx1.2lb ENSDARG00000099427 220 2.446 0.765 0.881 - - - - 0.800 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
23. espn ENSDARG00000076414 343 2.444 - 0.920 - - - 0.807 0.717 - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
24. TRPC4_1 TRPC4_1 212 2.437 0.712 1.000 - - - - 0.725 - -
25. neurog1 ENSDARG00000056130 3924 2.429 - - - - - 0.836 0.873 - 0.720 neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
26. nes ENSDARG00000088805 2710 2.409 - 0.770 - - - 0.749 0.890 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
27. eef1a1a ENSDARG00000039502 234 2.406 0.790 0.881 - - - 0.735 - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
28. ANKRD13D ENSDARG00000098140 88 2.391 0.812 - - - - 0.744 0.835 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
29. tmem179 ENSDARG00000013292 343 2.382 - 0.946 - - - 0.722 0.714 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
30. slc1a2b ENSDARG00000102453 3136 2.376 - 0.829 - - - - 0.787 - 0.760 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
31. csf1b ENSDARG00000068263 248 2.373 0.885 0.714 - - - - 0.774 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
32. msi1 ENSDARG00000010710 2634 2.369 0.768 - - - - 0.774 0.827 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
33. sox19b ENSDARG00000040266 532 2.366 0.761 - - - - 0.762 0.843 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
34. C8H1orf106 C8H1orf106 2690 2.34 0.726 - - - - 0.810 0.804 - -
35. pcdh18a ENSDARG00000089805 1096 2.335 - - - - - 0.774 0.729 - 0.832 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
36. scrt2 ENSDARG00000056175 4331 2.321 0.702 0.895 - - - - 0.724 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
37. stmn2a ENSDARG00000033234 2272 2.294 - 0.702 - - - - 0.819 - 0.773 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
38. SAMD14 145 2.255 0.739 - - - - 0.794 0.722 - - sterile alpha motif domain containing 14, transcript variant X3
39. nova2 ENSDARG00000017673 7685 2.254 - 0.708 - - - 0.705 0.841 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
40. rheb ENSDARG00000090213 1432 2.238 - - - - - 0.716 0.751 - 0.771 Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
41. rtn1b ENSDARG00000021143 1682 2.236 0.723 0.783 - - - - 0.730 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
42. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.229 - 0.704 - - - 0.772 0.753 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
43. CABZ01054405.1 CABZ01054405.1 115 1.984 - 1.000 - - - - - - 0.984
44. pif1 ENSDARG00000020289 216 1.981 - 1.000 - - - - - - 0.981 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
45. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.95 - 1.000 - - - - 0.950 - -
46. CU914780.1 ENSDARG00000114023 105 1.942 0.942 1.000 - - - - - - -
47. neflb ENSDARG00000012426 298 1.936 - 1.000 - - - - 0.936 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
48. st8sia5 ENSDARG00000036584 529 1.935 - - - - - - 0.950 - 0.985 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
49. si:ch211-138k19.2 si:ch211-138k19.2 398 1.924 - 1.000 - - - - 0.924 - -
50. TUBB2A TUBB2A 142 1.913 - 1.000 - - - - 0.913 - -
51. TUBB8P7_2 TUBB8P7_2 565 1.896 - - - - - - 0.913 - 0.983
52. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1.895 - 1.000 - - - 0.895 - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
53. MAP6 MAP6 643 1.888 - 0.927 - - - - 0.961 - -
54. SNAP91 ENSDARG00000098809 556 1.88 - - - - - - 0.895 - 0.985 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
55. CT573433.2 CT573433.2 115 1.878 0.878 1.000 - - - - - - -
56. trim46b ENSDARG00000058649 54 1.874 - 1.000 - - - - 0.874 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
57. lhx4 ENSDARG00000039458 328 1.873 - - - - - 0.946 0.927 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
58. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.864 - 1.000 - - - - 0.864 - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
59. si:ch211-133l11.10 ENSDARG00000005626 381 1.861 - - - - - - 0.883 - 0.978 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
60. EML6 250 1.851 0.861 - - - - - 0.990 - - echinoderm microtubule associated protein like 6
61. scn2b ENSDARG00000101713 796 1.844 - 0.909 - - - - 0.935 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
62. CR848045.1 CR848045.1 459 1.842 - - - - - 0.877 0.965 - -
63. MCF2L2 ENSDARG00000079742 52 1.841 - 1.000 - - - 0.841 - - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
64. rac3a ENSDARG00000090062 394 1.832 - - - - - - 0.854 - 0.978 Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
65. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1.83 - 1.000 - - - 0.830 - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
66. zgc:173713 17 1.827 - 1.000 - - - 0.827 - - - zgc:173713, transcript variant X2
67. chga ENSDARG00000008829 1086 1.822 - - - - - 0.878 0.944 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
68. st8sia2 ENSDARG00000018788 2183 1.819 - - - - - - 0.899 - 0.920 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
69. KCNG2 ENSDARG00000035961 58 1.814 0.814 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
70. olig2 ENSDARG00000040946 1405 1.811 - - - - - - 0.880 - 0.931 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
71. syt11a ENSDARG00000057913 1145 1.808 - 0.902 - - - - 0.906 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
72. gad1b ENSDARG00000027419 440 1.807 - - - - - - 0.858 - 0.949 glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
73. GRIK3 ENSDARG00000077715 178 1.804 - 1.000 - - - 0.804 - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
74. rap2ip rap2ip 681 1.798 - 0.907 - - - - 0.891 - -
75. SV2B SV2B 208 1.792 - 0.909 - - - - 0.883 - -
76. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 1.79 0.790 1.000 - - - - - - - retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
77. sez6l2 ENSDARG00000076052 360 1.789 - 0.907 - - - - 0.882 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
78. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.784 - - - - - - 0.830 - 0.954 FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
79. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.779 - - - - - 0.827 0.952 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
80. fam219ab ENSDARG00000013813 591 1.772 - 1.000 - - - - 0.772 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
81. cdh7 582 1.772 - - - - - 0.846 0.926 - - cadherin 7, type 2, transcript variant X1
82. rab39b rab39b 449 1.771 - - - - - - 0.820 - 0.951
83. tmem59l ENSDARG00000003655 1536 1.771 - - - - - - 0.824 - 0.947 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
84. FAM196A 82 1.769 - 0.901 - - - - 0.868 - - family with sequence similarity 196 member A
85. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.766 - - - - - 0.868 0.898 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
86. lhx1a ENSDARG00000014018 958 1.762 - 0.903 - - - - 0.859 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
87. calca ENSDARG00000056590 150 1.761 - - - - - 0.862 0.899 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
88. nptx1l ENSDARG00000074671 569 1.76 - 0.918 - - - - 0.842 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
89. pou4f2 ENSDARG00000069737 451 1.753 - - - - - - 0.922 - 0.831 POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
90. ksr2 ENSDARG00000094526 134 1.751 - 0.901 - - - - 0.850 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
91. tmem44 ENSDARG00000068193 8 1.749 - 1.000 - - - 0.749 - - - transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
92. CACNA2D1 ENSDARG00000073752 6 1.749 - 1.000 - - - 0.749 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
93. si:dkey-57l19.1 ENSDARG00000098143 1 1.749 - 1.000 - - - 0.749 - - - si:dkey-57l19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-171]
94. AL935186.3 ENSDARG00000109223 19 1.749 - 1.000 - - - 0.749 - - -
95. ifit2 ifit2 11 1.749 - 1.000 - - - 0.749 - - -
96. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.746 - - - - - 0.788 0.958 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
97. tmem35 ENSDARG00000052567 5685 1.745 - - - - - 0.859 0.886 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
98. her4.3 ENSDARG00000070770 613 1.743 - - - - - 0.789 0.954 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
99. dync1i1 ENSDARG00000060948 554 1.741 - - - - - 0.789 0.952 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
100. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.74 - - - - - - 0.790 - 0.950 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]

There are 2089 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA