Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for josd1

Gene Name Gene ID Reads Annotation
josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]










Genes with expression patterns similar to josd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 4 1.000 - 1.000 - - - - 1.000 1.000 Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]
2. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 2.588 0.802 - 1.000 - - - - 0.786 -
3. si:dkey-33i11.1 ENSDARG00000053027 2 2 - - 1.000 - - - - 1.000 - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
4. si:dkeyp-35e5.5 ENSDARG00000104026 3 1.808 - - 1.000 - - - - - 0.808 si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
5. OTUD7A ENSDARG00000045556 1 1.802 0.802 - 1.000 - - - - - - OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
6. esyt1b ENSDARG00000014239 8 1.802 0.802 - 1.000 - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
7. si:dkey-51d8.9 ENSDARG00000096217 47 1.661 0.839 - - - - - - 0.822 - si:dkey-51d8.9 [Source:ZFIN;Acc:ZDB-GENE-110914-66]
8. U3_7 U3_7 4 1.61 0.802 - - - - - - - 0.808
9. cldnj ENSDARG00000058880 59 1.494 - - 0.774 - - - - 0.720 - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
10. si:ch73-77n15.2 si:ch73-77n15.2 0 1 - - - - - - - 1.000 -
11. FCHO1 ENSDARG00000015356 2 1 - - 1.000 - - - - - - FCH domain only 1 [Source:ZFIN;Acc:ZDB-GENE-120613-1]
12. CU468684.1 CU468684.1 1 1 - - 1.000 - - - - - -
13. NXPH4 11 1 - - - - - - - 1.000 - neurexophilin 4
14. CABZ01080599.1 ENSDARG00000111801 0 1 - - 1.000 - - - - - - uncharacterized LOC101885127 [Source:NCBI gene;Acc:101885127]
15. lratb 3 1 - - 1.000 - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
16. clec3ba ENSDARG00000076541 3 1 - - 1.000 - - - - - - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
17. zgc:173713 17 1 - - - - - - - 1.000 - zgc:173713, transcript variant X2
18. CR792453.1 ENSDARG00000095699 4 1 - - - - - - - 1.000 -
19. CABZ01079009.1 CABZ01079009.1 1 1 - - 1.000 - - - - - -
20. DDO_1 DDO_1 5 1 - - - - - - - 1.000 -
21. PRKCA_1 ENSDARG00000099841 12 1 - - 1.000 - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
22. UIMC1 200 1 - - 1.000 - - - - - - ubiquitin interaction motif containing 1
23. fem1a ENSDARG00000067966 11 1 - - - - - - - 1.000 - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
24. BX927318.2 BX927318.2 5 1 - - 1.000 - - - - - -
25. VOPP1 ENSDARG00000076373 12 1 - - 1.000 - - - - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
26. si:ch211-241n15.3 ENSDARG00000088915 5 1 - - - - - - - 1.000 - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
27. CR925773.1 ENSDARG00000086266 0 1 - - - - - - - 1.000 - caspase-3-like [Source:NCBI gene;Acc:798445]
28. BRINP3 BRINP3 11 1 - - - - - - - 1.000 -
29. OLFM4 OLFM4 6 1 - - 1.000 - - - - - -
30. CR936967.1 CR936967.1 2 1 - - - - - - - 1.000 -
31. wu:fe37d09 wu:fe37d09 0 1 - - 1.000 - - - - - -
32. CR450785.2 ENSDARG00000111875 1 1 - - 1.000 - - - - - -
33. CABZ01085177.1 ENSDARG00000104644 6 1 - - 1.000 - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
34. si:dkey-11d20.4 si:dkey-11d20.4 6 1 - - 1.000 - - - - - -
35. cmpk2 ENSDARG00000031359 1 1 - - - - - - - 1.000 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
36. shank3a ENSDARG00000063332 5 1 - - 1.000 - - - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
37. gabrr1 ENSDARG00000043902 1 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
38. SYNGAP1 SYNGAP1 4 1 - - 1.000 - - - - - -
39. CUL9 2 1 - - - - - - - 1.000 - cullin 9
40. LRRC52 ENSDARG00000090698 1 1 - - 1.000 - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
41. si:dkey-247i3.5 ENSDARG00000096186 7 1 - - 1.000 - - - - - - si:dkey-247i3.5 [Source:ZFIN;Acc:ZDB-GENE-110914-32]
42. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - - - - - - - 1.000 - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
43. coch ENSDARG00000024032 7 1 - - - - - - - 1.000 - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
44. BX470083.4 ENSDARG00000115059 8 1 - - - - - - - 1.000 -
45. si:ch211-262n1.5 12 1 - - 1.000 - - - - - - si:ch211-262n1.5
46. U6_31 U6_31 0 1 - - - - - - - 1.000 -
47. NLRC5 ENSDARG00000024631 11 1 - - 1.000 - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
48. si:dkey-26g8.11 si:dkey-26g8.11 4 1 - - - - - - - 1.000 -
49. brinp3b ENSDARG00000075352 14 1 - - 1.000 - - - - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
50. pcdh2g16 1 1 - - 1.000 - - - - - - protocadherin 2 gamma 16
51. BX936386.1 ENSDARG00000097166 5 1 - - - - - - - 1.000 -
52. tmprss4b ENSDARG00000012860 6 1 - - - - - - - 1.000 - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
53. mfi2 224 1 - - 1.000 - - - - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
54. syt15 ENSDARG00000079926 8 1 - - - - - - - 1.000 - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
55. PLEKHD1 ENSDARG00000091349 0 1 - - 1.000 - - - - - - pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 [Source:ZFIN;Acc:ZDB-GENE-130926-1]
56. ush2a ENSDARG00000029482 10 1 - - 1.000 - - - - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
57. BX950868.2 ENSDARG00000104423 4 1 - - 1.000 - - - - - -
58. GPX2 ENSDARG00000089149 10 1 - - 1.000 - - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
59. BX572619.4 BX572619.4 10 1 - - - - - - - 1.000 -
60. si:dkey-13d5.1 si:dkey-13d5.1 3 1 - - 1.000 - - - - - -
61. si:dkeyp-104h9.7 si:dkeyp-104h9.7 0 1 - - 1.000 - - - - - -
62. slc7a14b ENSDARG00000079231 6 1 - - 1.000 - - - - - - solute carrier family 7, member 14b [Source:ZFIN;Acc:ZDB-GENE-091113-47]
63. syt1b ENSDARG00000042350, ENSDARG00000112484 0 1 - - - - - - - 1.000 - synaptotagmin Ib [Source:ZFIN;Acc:ZDB-GENE-060503-166]
64. CABZ01079541.1 CABZ01079541.1 0 1 - - 1.000 - - - - - -
65. ptger4a ENSDARG00000059236 13 1 1.000 - - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
66. 5S_rRNA_27 5S_rRNA_27 2 1 - - 1.000 - - - - - -
67. fam207a_1 ENSDARG00000071500 1 1 - - - - - - - 1.000 - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
68. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - - - - 1.000 -
69. bricd5 ENSDARG00000056247 1 1 - - - - - - - 1.000 - BRICHOS domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-85]
70. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 - - 1.000 - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
71. BX088603.2 ENSDARG00000099595 2 1 - - 1.000 - - - - - -
72. eif3bb ENSDARG00000074213 2 1 - - - - - - - 1.000 - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
73. SBSPON ENSDARG00000110160 2 1 - - - - - - - 1.000 - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
74. SCARNA15 SCARNA15 1 1 - - 1.000 - - - - - -
75. si:ch211-113a14.19_2 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 17 1 1.000 - - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
76. slc26a4 ENSDARG00000069431 2 1 - - 1.000 - - - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
77. CMA1_6 CMA1_6 2 1 - - - - - - - 1.000 -
78. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - 1.000 - - - - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
79. SVEP1 ENSDARG00000013526 16 1 - - - - - - - 1.000 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110726-1]
80. rbbp9 ENSDARG00000040713 12 1 - - - - - - - 1.000 - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
81. si:ch73-249k16.3 si:ch73-249k16.3 3 1 - - 1.000 - - - - - -
82. crtac1b ENSDARG00000102517 0 1 - - 1.000 - - - - - - cartilage acidic protein 1b [Source:ZFIN;Acc:ZDB-GENE-090312-28]
83. sh3bp4 ENSDARG00000030104, ENSDARG00000109621 51 1 1.000 - - - - - - - - SH3-domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-509]
84. olig1 ENSDARG00000040948 1 1 - - - - - - - 1.000 - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
85. lrch4 ENSDARG00000068258 24 1 - - - - - - - 1.000 - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
86. NCAM2 ENSDARG00000098523 2 1 - - 1.000 - - - - - - neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:7657]
87. BX004879.1 BX004879.1 0 1 - - 1.000 - - - - - -
88. si:ch73-366i20.1 ENSDARG00000092949 0 1 - - 1.000 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
89. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - 1.000 - - - - - - si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
90. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - 1.000 - - - - - - si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
91. si:dkey-47k16.4 ENSDARG00000113005 87 1 - - 1.000 - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
92. CABZ01049058.1 CABZ01049058.1 7 1 - - - - - - - 1.000 -
93. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - 1.000 - - - - - -
94. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - 1.000 - - - - - -
95. or115-8 ENSDARG00000092406 1 1 - - - - - - - 1.000 - odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
96. si:dkey-29j8.4 si:dkey-29j8.4 17 1 - - 1.000 - - - - - -
97. tcf4 0 1 - - - - - - - 1.000 - transcription factor 4
98. mcoln1b ENSDARG00000058848 3 1 - - 1.000 - - - - - - mucolipin 1b [Source:ZFIN;Acc:ZDB-GENE-130514-1]
99. CR847844.3 CR847844.3 1 1 - - - - - - - 1.000 -
100. rab11bb_1 ENSDARG00000090086 7 1 1.000 - - - - - - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]

There are 400 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA