Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ivd

Gene Name Gene ID Reads Annotation
ivd ENSDARG00000042853, ENSDARG00000112920 1526 isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]










Genes with expression patterns similar to ivd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ivd ENSDARG00000042853, ENSDARG00000112920 1526 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
2. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 2.455 0.979 - - - - 0.724 0.752 - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
3. mrpl36 ENSDARG00000070607 4069 2.428 - 0.952 - - - 0.715 0.761 - - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
4. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 2.246 - - - 0.711 - 0.799 0.736 - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
5. aimp1 ENSDARG00000060036 5343 2.157 - 0.720 - - - 0.716 0.721 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
6. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 1.988 0.995 0.993 - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
7. pdlim5b ENSDARG00000027600 4252 1.945 0.995 0.950 - - - - - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
8. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 1.902 0.976 0.926 - - - - - - - pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
9. srp72 ENSDARG00000014139 5221 1.894 0.960 0.934 - - - - - - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
10. ndufa9 ndufa9 8846 1.76 0.970 - - - - - 0.790 - -
11. uqcrc2a ENSDARG00000014794 3949 1.73 0.991 - - - - - 0.739 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
12. pno1 ENSDARG00000008502 4547 1.722 0.988 - - - - 0.734 - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
13. farsb ENSDARG00000016864 6776 1.719 0.981 - - - - - 0.738 - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
14. nob1 ENSDARG00000016080 2483 1.709 - 0.977 - - - 0.732 - - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
15. rpl10 ENSDARG00000025581, ENSDARG00000115128, ENSDARG00000117015 6574 1.707 0.988 - - - - 0.719 - - - ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-030131-8656]
16. cxcl12a ENSDARG00000037116 5433 1.707 0.979 - - - - - 0.728 - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
17. atp5j 4272 1.703 0.984 - - - - - 0.719 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
18. sf3b2 ENSDARG00000018049 4675 1.701 0.879 0.822 - - - - - - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
19. pip4k2aa ENSDARG00000003776 865 1.7 - 0.995 - - - - 0.705 - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
20. naa15a ENSDARG00000003213 5889 1.697 0.992 - - 0.705 - - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
21. ndufs1 ENSDARG00000028546 5795 1.689 - 0.967 - - - - 0.722 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
22. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.688 - 0.930 - - - - 0.758 - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
23. nr2f5 ENSDARG00000033172 11808 1.672 0.857 0.815 - - - - - - - nuclear receptor subfamily 2, group F, member 5 [Source:ZFIN;Acc:ZDB-GENE-990415-253]
24. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.653 - 0.829 - - - - 0.824 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
25. fermt2 ENSDARG00000020242 9351 1.632 - 0.908 - - - - 0.724 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
26. cox6c ENSDARG00000038577 16845 1.617 0.915 - - - - - 0.702 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
27. atpif1a 6030 1.614 - 0.910 - - - - 0.704 - - ATPase inhibitory factor 1a
28. hypk ENSDARG00000059725 20584 1.602 0.849 - - - - - 0.753 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
29. eif2s1b ENSDARG00000052178 11961 1.517 - - - - - 0.769 0.748 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
30. alpk3a ENSDARG00000078989 1992 1.473 - - - - - 0.709 0.764 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
31. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.435 - - - - - 0.719 0.716 - - eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
32. sh3bgr ENSDARG00000021633 3498 1.426 - - - - - 0.701 0.725 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
33. COX20 ENSDARG00000099997 1451 1.418 - - - - - 0.710 0.708 - - cytochrome c oxidase assembly factor COX20 [Source:ZFIN;Acc:ZDB-GENE-040718-467]
34. dync1li1 ENSDARG00000098317 729 0.999 0.999 - - - - - - - - dynein, cytoplasmic 1, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4108]
35. HAUS8 HAUS8 625 0.998 0.998 - - - - - - - -
36. cx35.4 ENSDARG00000042866 685 0.998 0.998 - - - - - - - - connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
37. nxf1 ENSDARG00000055076 3251 0.998 0.998 - - - - - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
38. baz1a ENSDARG00000063233, ENSDARG00000099745 563 0.998 0.998 - - - - - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
39. kat2a ENSDARG00000104734 802 0.998 0.998 - - - - - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
40. sf3b4 ENSDARG00000018574 7470 0.998 0.998 - - - - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
41. dhrs7c dhrs7c 1173 0.998 0.998 - - - - - - - -
42. foxj1b ENSDARG00000088290 343 0.998 0.998 - - - - - - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
43. rad50 ENSDARG00000038917 1105 0.998 0.998 - - - - - - - - RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
44. mycla ENSDARG00000006003 1866 0.998 0.998 - - - - - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
45. CDIP1 ENSDARG00000076118 1294 0.998 0.998 - - - - - - - - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
46. ZNF385C ENSDARG00000058154 478 0.998 0.998 - - - - - - - - zinc finger protein 385C [Source:ZFIN;Acc:ZDB-GENE-091112-1]
47. mpp7 mpp7 743 0.998 0.998 - - - - - - - -
48. gtf2a1 ENSDARG00000011000 2026 0.998 0.998 - - - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
49. si:dkey-4c15.19 si:dkey-4c15.19 219 0.998 0.998 - - - - - - - -
50. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 0.998 0.998 - - - - - - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
51. nktr ENSDARG00000059097 1998 0.997 0.997 - - - - - - - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
52. ptpn9a ENSDARG00000077495 2295 0.997 - 0.997 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
53. CT955984.1 ENSDARG00000113577 1482 0.997 0.997 - - - - - - - -
54. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.997 0.997 - - - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
55. ppp1cc 2361 0.997 0.997 - - - - - - - - protein phosphatase 1, catalytic subunit, gamma isozyme
56. acadsb ENSDARG00000076780 2382 0.997 - 0.997 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
57. pon2 ENSDARG00000016856 1382 0.997 0.997 - - - - - - - - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
58. syf2 ENSDARG00000004706 2463 0.997 0.997 - - - - - - - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
59. lin52 ENSDARG00000070833 2271 0.997 0.997 - - - - - - - - lin-52 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-061110-82]
60. mpi ENSDARG00000030786 3052 0.997 0.997 - - - - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
61. prr12a ENSDARG00000074229 1668 0.997 - 0.997 - - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
62. ppm1k ENSDARG00000010655 1285 0.997 0.997 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1K [Source:ZFIN;Acc:ZDB-GENE-050306-8]
63. ppapdc1b ppapdc1b 2866 0.997 0.997 - - - - - - - -
64. dnttip2 ENSDARG00000057648 2381 0.997 0.997 - - - - - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
65. apaf1 ENSDARG00000021239 1185 0.997 0.997 - - - - - - - - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
66. si:ch211-10d23.5 ENSDARG00000095510 2632 0.997 0.997 - - - - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
67. FAM210B ENSDARG00000052638 1755 0.997 0.997 - - - - - - - - family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
68. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 0.997 0.997 - - - - - - - - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
69. stk25a ENSDARG00000002210 372 0.997 0.997 - - - - - - - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
70. AL929204.1 AL929204.1 773 0.997 - 0.997 - - - - - - -
71. hmgcrb ENSDARG00000105206 2080 0.997 0.997 - - - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
72. csde1_1 ENSDARG00000074758 2759 0.996 0.996 - - - - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
73. stxbp5b ENSDARG00000029234 760 0.996 - 0.996 - - - - - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
74. zfand5b ENSDARG00000002271 4145 0.996 0.996 - - - - - - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
75. rab14 ENSDARG00000074246 4084 0.996 0.996 - - - - - - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
76. igsf9a ENSDARG00000075864 1870 0.996 - 0.996 - - - - - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
77. ppm1la ENSDARG00000063218 2142 0.996 0.996 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
78. polr1e ENSDARG00000006434, ENSDARG00000113920 770 0.996 - 0.996 - - - - - - - RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
79. ubn2 ubn2 534 0.996 - 0.996 - - - - - - -
80. C25H1orf51 C25H1orf51 2460 0.996 - 0.996 - - - - - - -
81. arid1ab ENSDARG00000101891 1722 0.996 - 0.996 - - - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
82. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.996 0.996 - - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
83. csrnp2 ENSDARG00000075972 1650 0.996 - 0.996 - - - - - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
84. zgc:123295 ENSDARG00000056324 361 0.996 - 0.996 - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
85. dlgap5 ENSDARG00000045167, ENSDARG00000109645 1466 0.996 0.996 - - - - - - - - discs, large (Drosophila) homolog-associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-040912-160]
86. si:ch211-218c6.8 ENSDARG00000092364 1270 0.996 - 0.996 - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
87. C18H15orf39 C18H15orf39 1125 0.996 0.996 - - - - - - - -
88. qpctla ENSDARG00000061691 869 0.996 0.996 - - - - - - - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
89. acsbg2 ENSDARG00000004094 2445 0.996 0.996 - - - - - - - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
90. adkb ENSDARG00000095947 990 0.996 0.996 - - - - - - - - adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948]
91. pfkfb3 ENSDARG00000001953 656 0.996 - 0.996 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
92. dab2ipb ENSDARG00000075110, ENSDARG00000117186 414 0.996 - 0.996 - - - - - - - DAB2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-030131-2449]
93. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 0.995 - 0.995 - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
94. DUSP28 ENSDARG00000059695 1135 0.995 - 0.995 - - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
95. nrg1 ENSDARG00000104314 1081 0.995 0.995 - - - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
96. SETDB2 ENSDARG00000101462 249 0.995 - 0.995 - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
97. mis18a ENSDARG00000035333 555 0.995 - 0.995 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
98. fosl2 ENSDARG00000040623 2041 0.995 - 0.995 - - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
99. dab2 ENSDARG00000031761 2000 0.995 0.995 - - - - - - - - Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040303-1]
100. ptk6a ENSDARG00000017947 682 0.995 - 0.995 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]

There are 665 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA