Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for itgb5

Gene Name Gene ID Reads Annotation
itgb5 ENSDARG00000012942, ENSDARG00000114990 406 integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]










Genes with expression patterns similar to itgb5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
2. gnsa ENSDARG00000023766 545 2.468 0.877 0.744 - 0.847 - - - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
3. si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 1.804 0.846 0.958 - - - - - - - si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]
4. si:ch211-241j12.3 ENSDARG00000043963 128 1.787 0.845 0.942 - - - - - - - si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
5. otud3 ENSDARG00000022648 263 1.778 - 0.938 - 0.840 - - - - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
6. tnfaip3 ENSDARG00000027777 1066 1.777 - 0.878 - 0.899 - - - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
7. adamtsl7 ENSDARG00000055439 575 1.766 0.824 0.942 - - - - - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
8. C24H8orf44 C24H8orf44 405 1.757 0.890 0.867 - - - - - - -
9. pcmtl ENSDARG00000042848, ENSDARG00000110149 301 1.739 - 0.887 - 0.852 - - - - - l-isoaspartyl protein carboxyl methyltransferase, like [Source:ZFIN;Acc:ZDB-GENE-040426-1738]
10. zgc:77486 ENSDARG00000013711, ENSDARG00000093978, ENSDARG00000111468, ENSDARG00000116962 139 1.712 - 0.910 - - - - 0.802 - - zgc:77486 [Source:ZFIN;Acc:ZDB-GENE-040426-2056]
11. map3k3 ENSDARG00000060348 1482 1.712 - - - 0.960 - - 0.752 - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
12. KCNK3 KCNK3 115 1.695 - 0.846 - 0.849 - - - - -
13. dnah9l ENSDARG00000062630 268 1.694 0.737 - - 0.957 - - - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
14. si:dkey-17e16.17 615 1.691 - - - 0.909 - - 0.782 - - si:dkey-17e16.17
15. tnk1 ENSDARG00000069433 639 1.689 0.804 0.885 - - - - - - - tyrosine kinase, non-receptor, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7427]
16. lrrcc1 ENSDARG00000078535 118 1.686 - - - 0.962 - - - - 0.724 leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
17. prkx ENSDARG00000060716 530 1.669 0.796 0.873 - - - - - - - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
18. mcf2la ENSDARG00000075859 882 1.656 - 0.861 - - - - 0.795 - - mcf.2 cell line derived transforming sequence-like a [Source:ZFIN;Acc:ZDB-GENE-090312-122]
19. SLC27A3 SLC27A3 240 1.64 0.722 - - 0.918 - - - - -
20. gnb1a ENSDARG00000090454 481 1.639 0.789 - - - - - 0.850 - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
21. ercc6 ENSDARG00000075612 1175 1.635 - 0.767 - 0.868 - - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
22. helb ENSDARG00000053127 235 1.623 0.726 - - 0.897 - - - - - helicase (DNA) B [Source:ZFIN;Acc:ZDB-GENE-030729-16]
23. tctex1d1 ENSDARG00000103545 409 1.61 - 0.841 - 0.769 - - - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
24. gcc1 ENSDARG00000045541 1821 1.607 0.803 0.804 - - - - - - - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
25. txndc11 ENSDARG00000101291 589 1.595 - 0.759 - 0.836 - - - - - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
26. aatka ENSDARG00000078222 218 1.577 0.859 - - - - - 0.718 - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]
27. dlx4a ENSDARG00000011956 882 1.574 - 0.851 - - - - 0.723 - - distal-less homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-980526-73]
28. RUNDC1 ENSDARG00000091962 693 1.566 - 0.835 - - - - 0.731 - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
29. CLCC1 155 1.562 - 0.773 - - - - 0.789 - - chloride channel CLIC-like 1, transcript variant X2
30. enthd2 481 1.557 - 0.813 - - - - 0.744 - - ENTH domain containing 2
31. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1.549 - 0.848 - - - - 0.701 - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
32. cyb5r2 ENSDARG00000051925 304 1.548 0.818 - - - - - - - 0.730 cytochrome b5 reductase 2 [Source:ZFIN;Acc:ZDB-GENE-060825-83]
33. CABZ01038514.1 CABZ01038514.1 724 1.546 0.786 0.760 - - - - - - -
34. dhx16 ENSDARG00000013150 436 1.537 - 0.730 - 0.807 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:ZFIN;Acc:ZDB-GENE-030131-8589]
35. zgc:136851 zgc:136851 315 1.518 0.756 - - 0.762 - - - - -
36. GIN1 GIN1 317 1.514 0.774 - - 0.740 - - - - -
37. kdm6a ENSDARG00000061759 1154 1.507 - - - - 0.703 - 0.804 - - lysine (K)-specific demethylase 6A [Source:ZFIN;Acc:ZDB-GENE-081105-56]
38. calrl2 calrl2 1677 1.48 - - - 0.771 - - 0.709 - -
39. mon1a ENSDARG00000078585 554 1.476 - 0.735 - - - - 0.741 - - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
40. FRMD4B FRMD4B 359 1.468 0.743 0.725 - - - - - - -
41. ano5b ENSDARG00000036147 89 1.436 - 0.715 - - - - 0.721 - - anoctamin 5b [Source:ZFIN;Acc:ZDB-GENE-061215-108]
42. rad21a ENSDARG00000006092 393 1.425 - 0.706 - 0.719 - - - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
43. mgme1 ENSDARG00000016656 173 0.98 - 0.980 - - - - - - - mitochondrial genome maintenance exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-041212-68]
44. si:dkey-93l1.9 13 0.978 - - - 0.978 - - - - - si:dkey-93l1.9
45. NAPB_1 NAPB_1 33 0.978 - - - 0.978 - - - - -
46. FP245511.1 FP245511.1 247 0.976 - 0.976 - - - - - - -
47. grm2a ENSDARG00000004150 64 0.974 - - - 0.974 - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
48. NOTUM NOTUM 232 0.974 - 0.974 - - - - - - -
49. C24H16orf11 C24H16orf11 32 0.973 - - - 0.973 - - - - -
50. trpa1b ENSDARG00000031875 39 0.973 - - - 0.973 - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
51. ubox5 ENSDARG00000058563 161 0.972 - - - 0.972 - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
52. olfm1a ENSDARG00000018270 107 0.972 - - - 0.972 - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
53. phyh ENSDARG00000086740 88 0.972 - - - 0.972 - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
54. fam43b ENSDARG00000070222 92 0.971 - - - 0.971 - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
55. pcdh1gb9 ENSDARG00000088475 71 0.971 - - - 0.971 - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
56. BX324003.4 BX324003.4 24 0.971 - - - 0.971 - - - - -
57. tmem187 ENSDARG00000051989 136 0.971 - - - 0.971 - - - - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
58. rock2b ENSDARG00000004877, ENSDARG00000096433 135 0.97 - - - 0.970 - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
59. NRSN2 NRSN2 57 0.969 - - - 0.969 - - - - -
60. wu:fb68b01 wu:fb68b01 42 0.969 - 0.969 - - - - - - -
61. lingo2 lingo2 67 0.969 - 0.969 - - - - - - -
62. SH3TC1 ENSDARG00000077330 8 0.968 - 0.968 - - - - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
63. pax1b ENSDARG00000073814 105 0.968 - 0.968 - - - - - - - paired box 1b [Source:ZFIN;Acc:ZDB-GENE-060503-372]
64. si:dkey-211g8.6 ENSDARG00000063088 19 0.968 - 0.968 - - - - - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
65. si:dkey-111b14.5 si:dkey-111b14.5 10 0.968 - 0.968 - - - - - - -
66. btr16 ENSDARG00000028850 21 0.968 - 0.968 - - - - - - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
67. MDFI ENSDARG00000089564 8 0.968 - 0.968 - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
68. RCVRN RCVRN 66 0.968 - 0.968 - - - - - - -
69. fam86a fam86a 174 0.968 - 0.968 - - - - - - -
70. ENKD1 ENSDARG00000043550 44 0.968 - 0.968 - - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
71. lacc1 ENSDARG00000076914 11 0.968 - 0.968 - - - - - - - laccase (multicopper oxidoreductase) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-155]
72. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 0.968 - 0.968 - - - - - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
73. herc3 ENSDARG00000075887 41 0.968 - 0.968 - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
74. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.968 - 0.968 - - - - - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
75. si:dkey-45k15.1 ENSDARG00000061714 32 0.968 - 0.968 - - - - - - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
76. MAP3K13 ENSDARG00000009493 8 0.968 - 0.968 - - - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
77. fam178a fam178a 29 0.968 - 0.968 - - - - - - -
78. zgc:171220 ENSDARG00000102959 164 0.968 - 0.968 - - - - - - - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
79. cryba2a ENSDARG00000030349 1342 0.968 - 0.968 - - - - - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
80. CABZ01069022.1 ENSDARG00000105692 16 0.968 - 0.968 - - - - - - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
81. si:dkey-96l17.6 ENSDARG00000094540 4 0.968 - 0.968 - - - - - - - si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
82. si:ch211-202h22.9 ENSDARG00000079980 2 0.968 - 0.968 - - - - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
83. upk1a ENSDARG00000021866 9 0.968 - 0.968 - - - - - - - uroplakin 1a [Source:ZFIN;Acc:ZDB-GENE-060421-2603]
84. CR356223.4 CR356223.4 42 0.968 - 0.968 - - - - - - -
85. CYP46A1 CYP46A1 16 0.968 - 0.968 - - - - - - -
86. mybpc1 ENSDARG00000045560 26 0.968 - 0.968 - - - - - - - myosin binding protein C, slow type [Source:ZFIN;Acc:ZDB-GENE-041114-196]
87. si:busm1-228j01.5 si:busm1-228j01.5 9 0.968 - 0.968 - - - - - - -
88. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 0.968 - 0.968 - - - - - - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
89. gfpt1 ENSDARG00000057465 14 0.968 - 0.968 - - - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
90. NUGGC NUGGC 9 0.968 - 0.968 - - - - - - -
91. rnh1 ENSDARG00000086631 14 0.968 - 0.968 - - - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
92. si:ch211-217k17.8 ENSDARG00000095434 3 0.968 - 0.968 - - - - - - - si:ch211-217k17.8 [Source:ZFIN;Acc:ZDB-GENE-031010-46]
93. CAPN2 CAPN2 1497 0.968 - 0.968 - - - - - - -
94. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 0.968 - 0.968 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
95. stpg1 ENSDARG00000103765 19 0.968 - 0.968 - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
96. si:ch211-278p9.1 ENSDARG00000087532 18 0.968 - 0.968 - - - - - - - si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
97. klc3 ENSDARG00000055965 116 0.968 - - - 0.968 - - - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
98. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 0.968 - 0.968 - - - - - - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
99. olah ENSDARG00000058502 100 0.968 - 0.968 - - - - - - - oleoyl-ACP hydrolase [Source:ZFIN;Acc:ZDB-GENE-060312-17]
100. mylkb ENSDARG00000004753 95 0.968 - 0.968 - - - - - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]

There are 1167 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA