Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for itgb3a

Gene Name Gene ID Reads Annotation
itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]










Genes with expression patterns similar to itgb3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
2. C20H6orf58 C20H6orf58 1105 2.42 0.753 - - - - 0.730 0.937 - -
3. zgc:173961 zgc:173961 1540 2.413 0.843 - - - - 0.736 0.834 - -
4. daam1a ENSDARG00000015059 1460 1.867 - - - - - 0.898 0.969 - - dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
5. sh3bgrl3 ENSDARG00000098075 3071 1.862 - - - - - - 0.977 - 0.885 SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
6. ctnnd1 ENSDARG00000078233 2520 1.856 - - - - - - 0.968 - 0.888 catenin (cadherin-associated protein), delta 1 [Source:ZFIN;Acc:ZDB-GENE-110208-9]
7. met ENSDARG00000070903 2088 1.853 - - - - - - 0.943 - 0.910 MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
8. slc38a2 ENSDARG00000045886 2052 1.85 - - - - - - 0.964 - 0.886 solute carrier family 38, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9659]
9. c6 ENSDARG00000057113, ENSDARG00000093052, ENSDARG00000115290 612 1.844 - - - - - 0.851 0.993 - - complement component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1358]
10. prickle1b ENSDARG00000045694 7536 1.805 - - - - - 0.852 0.953 - - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
11. stx4 ENSDARG00000052518 1848 1.804 - 0.825 - - - - 0.979 - - syntaxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2455]
12. lrp1b lrp1b 3216 1.801 - - - - - 0.820 0.981 - -
13. actn1 ENSDARG00000007219 2919 1.799 - - - - - - 0.888 - 0.911 actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
14. csnk1db ENSDARG00000006125 2581 1.794 - - - - - 0.814 0.980 - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
15. nrf1 ENSDARG00000000018 4683 1.755 - - - - - - 0.973 - 0.782 nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
16. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.745 - - - - - 0.807 0.938 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
17. elovl6 ENSDARG00000004402, ENSDARG00000114205 2286 1.742 - - - - - 0.841 - - 0.901 ELOVL fatty acid elongase 6 [Source:ZFIN;Acc:ZDB-GENE-030114-1]
18. zgc:162608 ENSDARG00000069375 2881 1.731 - - - - - 0.804 0.927 - - zgc:162608 [Source:ZFIN;Acc:ZDB-GENE-070410-86]
19. dnajc5gb ENSDARG00000017687, ENSDARG00000111738 855 1.729 - 0.747 - - - - 0.982 - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma b [Source:ZFIN;Acc:ZDB-GENE-040426-1238]
20. mbpb ENSDARG00000089413 3334 1.723 - - - - - 0.738 0.985 - - myelin basic protein b [Source:ZFIN;Acc:ZDB-GENE-030429-21]
21. epdl2 ENSDARG00000055539 1895 1.722 - - - - - 0.849 0.873 - - ependymin-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-250]
22. NCOA7_1 NCOA7_1 3222 1.718 - - - - - 0.863 0.855 - -
23. ralbp1 ENSDARG00000078653 2440 1.711 - 0.733 - - - - 0.978 - - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
24. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.708 - 0.729 - - - - 0.979 - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
25. cplx4b ENSDARG00000059486 3192 1.707 - 0.725 - - - - 0.982 - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
26. sos2 ENSDARG00000060506 769 1.704 - - - 0.718 - - 0.986 - - son of sevenless homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090319-5]
27. cited4a ENSDARG00000035990 2762 1.703 - 0.835 - - - - - - 0.868 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a [Source:ZFIN;Acc:ZDB-GENE-030131-7661]
28. znf185 ENSDARG00000103917 7195 1.698 - - - - - - 0.882 - 0.816 zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
29. zgc:85975 4738 1.692 - - - - - - 0.822 - 0.870 zgc:85975
30. sox4b ENSDARG00000098834 1634 1.691 - - - - - 0.822 - - 0.869 SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]
31. pqlc2 ENSDARG00000043624 1056 1.69 - - - - - 0.738 - - 0.952 PQ loop repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-050306-4]
32. C2CD2 ENSDARG00000105000 2573 1.686 - - - - - - 0.800 - 0.886 C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
33. tmem176l.4 ENSDARG00000074390 1886 1.682 - - - - - 0.770 - - 0.912 transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
34. CABZ01059390.1 CABZ01059390.1 4340 1.678 - - - - - 0.828 0.850 - -
35. vox ENSDARG00000099761 801 1.673 - - - - - 0.759 - - 0.914 ventral homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-1]
36. CU571162.1 CU571162.1 652 1.67 - 0.812 - - - 0.858 - - -
37. cad ENSDARG00000041895 4977 1.665 - - - - - 0.746 0.919 - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:ZFIN;Acc:ZDB-GENE-021030-4]
38. si:dkey-118j18.2 ENSDARG00000096457 5293 1.663 - 0.768 - - - - - - 0.895 si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
39. abcb5 ENSDARG00000021787 2875 1.663 - - - - - 0.783 0.880 - - ATP-binding cassette, sub-family B (MDR/TAP), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6414]
40. WDR1 ENSDARG00000114022 7532 1.66 - - - - - 0.810 0.850 - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
41. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 1.66 0.834 - - - - 0.826 - - - Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
42. wbp1lb ENSDARG00000029751 1072 1.658 0.803 - - - - 0.855 - - - WW domain binding protein 1-like b [Source:ZFIN;Acc:ZDB-GENE-050522-112]
43. CFI 3801 1.648 - - - - - 0.756 0.892 - - complement factor I
44. arpc5b ENSDARG00000019062 2786 1.647 - - - - - 0.810 - - 0.837 actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
45. ppat ENSDARG00000004517 3349 1.636 - - - - - 0.885 0.751 - - phosphoribosyl pyrophosphate amidotransferase [Source:ZFIN;Acc:ZDB-GENE-041210-323]
46. aldh4a1 ENSDARG00000038207 4639 1.63 - - - - - 0.769 - - 0.861 aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
47. cpne3 ENSDARG00000104177, ENSDARG00000109906, ENSDARG00000110868 1084 1.628 - 0.723 - - - - - - 0.905 copine III [Source:ZFIN;Acc:ZDB-GENE-040426-763]
48. CR391963.1 ENSDARG00000096833 518 1.622 - - - - - 0.711 - - 0.911
49. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.62 - 0.813 - - - 0.807 - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
50. arhgef25b ENSDARG00000014465 669 1.62 - - - - - 0.712 - - 0.908 Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
51. ppp1r13l ENSDARG00000013777 2260 1.616 - - - - - 0.712 - - 0.904 protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
52. lipf ENSDARG00000018529 1849 1.614 0.791 - - - - 0.823 - - - lipase, gastric [Source:ZFIN;Acc:ZDB-GENE-040426-2737]
53. tprg1l ENSDARG00000068149 1605 1.61 - - - 0.736 - - - - 0.874 tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
54. si:ch211-251f6.6 ENSDARG00000053448 323 1.605 0.837 - - - - 0.768 - - - si:ch211-251f6.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3219]
55. anxa4 ENSDARG00000036456 3332 1.605 - 0.715 - - - - 0.890 - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
56. npc1 ENSDARG00000017180 3724 1.603 - - - - - 0.880 0.723 - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
57. tln1 ENSDARG00000100729 5744 1.6 - 0.736 - - - - 0.864 - - talin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-48]
58. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 1.597 - - - - - 0.707 - - 0.890 RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
59. copg2 ENSDARG00000034823 4162 1.597 - - - - - 0.833 - - 0.764 coatomer protein complex, subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-000208-8]
60. klhl11 ENSDARG00000045130 800 1.596 - 0.701 - - - - - - 0.895 kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
61. PRODH2 PRODH2 1153 1.592 - 0.760 - - - 0.832 - - -
62. sp3a ENSDARG00000001549 1994 1.591 - 0.710 - - - - - - 0.881 sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
63. hm13 ENSDARG00000037846 5019 1.586 - 0.710 - - - - - - 0.876 histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
64. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.584 - - - - - 0.808 - - 0.776 ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
65. EML4_1 EML4_1 8736 1.581 - 0.806 - - - - - - 0.775
66. ces2 ENSDARG00000041569, ENSDARG00000110630 5541 1.579 - - - - - 0.835 0.744 - - carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
67. mapk3 ENSDARG00000070573 6842 1.574 - 0.821 - - - - - - 0.753 mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
68. taldo1 ENSDARG00000103369 3804 1.573 - - - - - 0.716 0.857 - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
69. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.568 - - - - - 0.754 - - 0.814 ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
70. naga ENSDARG00000099313 2483 1.562 - - - 0.780 - 0.782 - - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
71. WIPF2 WIPF2 3171 1.562 - - 0.796 - - - - - 0.766
72. atp6v1d ENSDARG00000011175 8331 1.562 - - - - - 0.740 0.822 - - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
73. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 1.561 0.819 0.742 - - - - - - - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
74. vps29 ENSDARG00000069521 5599 1.56 - - - - - 0.724 - - 0.836 vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
75. SBNO2 SBNO2 773 1.555 0.849 0.706 - - - - - - -
76. gcc1 ENSDARG00000045541 1821 1.548 0.832 - - - - 0.716 - - - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
77. COL7A1 ENSDARG00000021720 2210 1.545 0.720 - - - - - 0.825 - - collagen, type VII, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2427]
78. isca1 ENSDARG00000051956 5855 1.545 - - - - - 0.757 - - 0.788 iron-sulfur cluster assembly 1 [Source:ZFIN;Acc:ZDB-GENE-050626-94]
79. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 1.537 0.802 0.735 - - - - - - - secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
80. pycard ENSDARG00000040076 3956 1.534 - - - - - 0.820 0.714 - - PYD and CARD domain containing [Source:ZFIN;Acc:ZDB-GENE-000511-2]
81. rhbdf1 rhbdf1 1608 1.519 0.711 - - - - 0.808 - - -
82. zc3h7b 2936 1.508 - 0.702 - - - - - - 0.806 zinc finger CCCH-type containing 7B
83. lamb1a ENSDARG00000101209 5396 1.506 - - - - - 0.706 - - 0.800 laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
84. diablob ENSDARG00000014956 745 1.493 - - - 0.780 - 0.713 - - - diablo, IAP-binding mitochondrial protein b [Source:ZFIN;Acc:ZDB-GENE-070112-202]
85. mmd ENSDARG00000040387 4522 1.492 - - - - - 0.704 0.788 - - monocyte to macrophage differentiation-associated [Source:ZFIN;Acc:ZDB-GENE-051120-39]
86. mlec ENSDARG00000059630 2057 1.46 - 0.760 - - - 0.700 - - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
87. alas1 ENSDARG00000021059 4892 1.449 - 0.739 - - - 0.710 - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
88. cfb ENSDARG00000055278, ENSDARG00000110358 1725 1.442 - - - - - 0.737 0.705 - - complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
89. DYNC1I2 DYNC1I2 4131 1.429 - 0.701 - - - 0.728 - - -
90. klf6a ENSDARG00000029072 3758 0.995 - - - - - - 0.995 - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
91. sord ENSDARG00000053405 2406 0.994 - - - - - - 0.994 - - sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
92. src ENSDARG00000008107 3643 0.994 - - - - - - 0.994 - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
93. lect2l ENSDARG00000033227 482 0.993 - - - - - - 0.993 - - leukocyte cell-derived chemotaxin 2 like [Source:ZFIN;Acc:ZDB-GENE-070127-4]
94. fam3c ENSDARG00000056152 3833 0.993 - - - - - - 0.993 - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
95. fahd1 ENSDARG00000031657 521 0.993 - - - - - - 0.993 - - fumarylacetoacetate hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-448]
96. CHST5 CHST5 1293 0.992 - - - - - - 0.992 - -
97. pcyt2 ENSDARG00000043003 3506 0.992 - - - - - - 0.992 - - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
98. si:ch211-51a6.2 ENSDARG00000030967 593 0.992 - - - - - - 0.992 - - si:ch211-51a6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-118]
99. ARSB ENSDARG00000108788 774 0.991 - - - - - - 0.991 - - arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
100. hs6st2 ENSDARG00000012025 1145 0.991 - - - - - - 0.991 - - heparan sulfate 6-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-14]

There are 1290 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA