Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for itgb1a

Gene Name Gene ID Reads Annotation
itgb1a ENSDARG00000071863 4007 integrin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-060803-2]










Genes with expression patterns similar to itgb1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. itgb1a ENSDARG00000071863 4007 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 integrin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-060803-2]
2. hfe2 4113 2.476 0.773 - - - - - 0.942 0.761 - hemochromatosis type 2
3. bves ENSDARG00000058548 2291 2.411 0.727 - - - - 0.709 0.975 - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
4. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.248 0.728 - - - - 0.745 - 0.775 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
5. tmem161a ENSDARG00000012790 16094 2.195 0.774 - - - - - 0.708 - 0.713 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
6. AIMP1 ENSDARG00000060036 4136 1.805 - - - - - 0.829 0.976 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
7. smyd1b ENSDARG00000091253 4964 1.773 0.784 - - - - - 0.989 - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
8. cbsb ENSDARG00000010946 5779 1.761 - - - - - 0.819 0.942 - - cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
9. rcn1 ENSDARG00000070006 8455 1.703 - - - - - 0.799 0.904 - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
10. eif3s10 ENSDARG00000076815 10822 1.702 0.730 - - - - - 0.972 - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
11. ndufb6 ENSDARG00000037259 6515 1.675 - - - - - 0.743 0.932 - - NADH:ubiquinone oxidoreductase subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1781]
12. nhsl1b ENSDARG00000042627 3697 1.67 - 0.754 - - - - 0.916 - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
13. setbp1 ENSDARG00000093799 4499 1.658 - - - - - 0.704 0.954 - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
14. CORO1C CORO1C 5554 1.65 - 0.718 - - - - 0.932 - -
15. hdgfrp2 7462 1.647 - 0.710 - - - - 0.937 - - hepatoma-derived growth factor-related protein 2, transcript variant X1
16. gnl3 ENSDARG00000006219 3854 1.637 - 0.713 - - - - 0.924 - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
17. kif11 ENSDARG00000010948 4973 1.633 - 0.709 - - - - 0.924 - - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
18. CHST5 CHST5 1293 1.618 - - - - - - 0.902 0.716 -
19. nexn ENSDARG00000057317 10972 1.615 0.782 - - - - 0.833 - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
20. hhatlb ENSDARG00000005139 6674 1.608 0.793 - - - - 0.815 - - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
21. chrna1 ENSDARG00000009021 2931 1.608 0.774 - - - - 0.834 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
22. tgm2a ENSDARG00000070157 4516 1.593 0.747 - - - - 0.846 - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
23. prpf8 ENSDARG00000026180 7026 1.589 - 0.703 - - - - 0.886 - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
24. eif2s3 ENSDARG00000008292 17051 1.576 0.755 - - - - - 0.821 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
25. SYNPO2L SYNPO2L 6697 1.574 0.770 - - - - 0.804 - - -
26. PTPLA PTPLA 4044 1.57 0.785 - - - - 0.785 - - -
27. ptrfa ptrfa 4363 1.562 0.774 - - - - 0.788 - - -
28. klhl41b ENSDARG00000006757 10762 1.561 0.761 - - - - 0.800 - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
29. plecb ENSDARG00000021987 13621 1.559 0.809 0.750 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
30. FHOD3_1 FHOD3_1 983 1.549 0.748 - - - - 0.801 - - -
31. PTGES3L PTGES3L 4801 1.546 0.787 - - - - 0.759 - - -
32. vcl vcl 6667 1.545 0.812 0.733 - - - - - - -
33. hapln1a ENSDARG00000089769 12334 1.539 0.789 0.750 - - - - - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
34. mpp6b ENSDARG00000029761 2142 1.538 0.769 0.769 - - - - - - - membrane protein, palmitoylated 6b (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-040426-775]
35. lpl ENSDARG00000087697 2578 1.536 - 0.770 - - - 0.766 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
36. h1f0 ENSDARG00000038559 39781 1.533 - - - - - 0.700 0.833 - - H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
37. myod1 ENSDARG00000030110 6019 1.529 0.726 - - - - 0.803 - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
38. NRAP ENSDARG00000009341 3565 1.528 0.784 - - - - 0.744 - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
39. cmya5 ENSDARG00000061379 1423 1.528 0.780 - - - - 0.748 - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
40. dhrs7c dhrs7c 1173 1.526 - - - - - 0.745 - 0.781 -
41. sptb ENSDARG00000030490 7128 1.525 0.752 - - - - 0.773 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
42. larsb ENSDARG00000019280 3924 1.523 0.787 - - - - 0.736 - - - leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
43. smtnl1 ENSDARG00000041257 7410 1.52 0.739 - - - - 0.781 - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
44. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 1.518 0.738 0.780 - - - - - - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
45. MYOM3 2720 1.515 0.784 0.731 - - - - - - - myomesin 3, transcript variant X2
46. kcnma1a ENSDARG00000079840 2584 1.514 0.803 0.711 - - - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
47. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.512 - 0.806 - - - - - 0.706 - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
48. znf106a ENSDARG00000016651 6049 1.511 0.702 0.809 - - - - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
49. si:ch211-242b18.1 ENSDARG00000054723 2929 1.511 - 0.749 - - - - - 0.762 - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
50. murca murca 6614 1.509 0.769 - - - - 0.740 - - -
51. celf1 ENSDARG00000005315 5598 1.508 - 0.801 - - - 0.707 - - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
52. cct5 ENSDARG00000045399 11572 1.503 0.753 0.750 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
53. pygma ENSDARG00000055518 15972 1.5 0.787 0.713 - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
54. osbpl2a ENSDARG00000053804 1883 1.498 - 0.749 - - - 0.749 - - - oxysterol binding protein-like 2a [Source:ZFIN;Acc:ZDB-GENE-091116-46]
55. trdn ENSDARG00000041779 4283 1.497 0.787 - - - - - - - 0.710 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
56. eif2b4 ENSDARG00000014004 2213 1.497 - 0.777 - - - - - 0.720 - eukaryotic translation initiation factor 2B, subunit 4 delta [Source:ZFIN;Acc:ZDB-GENE-030131-955]
57. tnnt2d ENSDARG00000002988 7590 1.49 0.737 - - - - 0.753 - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
58. foxp4 ENSDARG00000076120 9458 1.49 0.731 - - - - - 0.759 - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
59. cacng1 cacng1 3118 1.488 0.771 - - - - 0.717 - - -
60. tnnc1b ENSDARG00000037539 13945 1.483 - 0.722 - - - 0.761 - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
61. eef2l2 ENSDARG00000035256 6815 1.483 0.728 - - - - - 0.755 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
62. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.481 0.754 - - - - 0.727 - - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
63. ntmt1 ENSDARG00000022399 5779 1.48 0.757 0.723 - - - - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
64. tgfbi ENSDARG00000071586 17779 1.479 0.701 - - - - 0.778 - - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
65. MYOM1 MYOM1 3870 1.474 0.759 0.715 - - - - - - -
66. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 1.472 - - - - - 0.756 - 0.716 - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
67. sucla2 ENSDARG00000005359 5992 1.469 0.763 - - - - 0.706 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
68. sms ENSDARG00000008155 1192 1.466 - 0.744 - - - 0.722 - - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
69. txnipb ENSDARG00000070000 2365 1.465 - 0.725 - - - 0.740 - - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
70. trim63 trim63 2437 1.462 0.756 - - - - 0.706 - - -
71. stac3 ENSDARG00000098883 1765 1.461 0.701 - - - - 0.760 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
72. C13H10orf71 3489 1.46 0.739 0.721 - - - - - - - chromosome 13 C10orf71 homolog
73. jph2 ENSDARG00000028625 6706 1.456 0.727 - - - - 0.729 - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
74. pcbp2 ENSDARG00000099039 4248 1.454 - 0.705 - - - - 0.749 - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
75. apex1 ENSDARG00000045843 6345 1.453 0.716 0.737 - - - - - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
76. trim55a ENSDARG00000029596 2858 1.45 0.717 0.733 - - - - - - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
77. flncb ENSDARG00000018820 5595 1.449 0.739 - - - - 0.710 - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
78. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.447 0.707 0.740 - - - - - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
79. zgc:86725 2559 1.444 - - - - - 0.704 0.740 - - zgc:86725
80. NDUFC2 ENSDARG00000102115 7848 1.436 0.727 - - - - 0.709 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:ZFIN;Acc:ZDB-GENE-050320-87]
81. klhl40a ENSDARG00000039052 2537 1.433 0.702 - - - - 0.731 - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
82. mycb ENSDARG00000007241 3988 1.432 0.711 - - - - 0.721 - - - MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
83. CR388002.1 CR388002.1 1998 1.431 0.722 0.709 - - - - - - -
84. mafa ENSDARG00000015890 2140 1.429 0.723 - - - - - - - 0.706 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
85. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.427 0.708 0.719 - - - - - - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
86. ucmab ENSDARG00000005485 1808 1.423 - 0.715 - - - 0.708 - - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
87. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.42 0.719 - - - - 0.701 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
88. sox6 ENSDARG00000015536 7728 1.413 0.710 - - - - - - - 0.703 SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
89. eng1b eng1b 2544 1.412 0.711 - - - - 0.701 - - -
90. dus3l ENSDARG00000099528 1192 1.412 - 0.701 - - - - - 0.711 - dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
91. nop58 ENSDARG00000104353 8497 1.41 0.706 0.704 - - - - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
92. PPP1R27 PPP1R27 646 0.974 - - - - - - 0.974 - -
93. tomm7 ENSDARG00000067717 4452 0.965 - - - - - - 0.965 - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
94. cnbpa ENSDARG00000045776 8648 0.965 - - - - - - 0.965 - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
95. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 0.961 - - - - - - 0.961 - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
96. ddx3 ddx3 4076 0.958 - - - - - - 0.958 - -
97. mbnl2 ENSDARG00000018460 3328 0.958 - - - - - - 0.958 - - muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
98. dag1 ENSDARG00000016153 10886 0.951 - - - - - - 0.951 - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
99. akr1b1 ENSDARG00000006215 2511 0.947 - - - - - - 0.947 - - aldo-keto reductase family 1, member B1 (aldose reductase) [Source:ZFIN;Acc:ZDB-GENE-040625-7]
100. ptp4a3 ENSDARG00000039997 1964 0.947 - - - - - - 0.947 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]

There are 917 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA