Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for itga5

Gene Name Gene ID Reads Annotation
itga5 ENSDARG00000006353 1876 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]










Genes with expression patterns similar to itga5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. itga5 ENSDARG00000006353 1876 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
2. RBM47 ENSDARG00000061985 2498 2.632 - - - - 0.969 0.779 0.884 - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
3. col12a1a ENSDARG00000078322 1833 2.389 - 0.759 - - - 0.787 0.843 - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
4. ctps1a ENSDARG00000030700 3868 2.217 - 0.701 - - - 0.801 0.715 - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
5. atp6v0ca ENSDARG00000057853 23277 2.181 - - - - 0.762 0.701 0.718 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
6. acvr2aa ENSDARG00000011188 1454 1.869 - 0.879 - - 0.990 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
7. limk2 ENSDARG00000005104 2598 1.795 - 0.811 - - 0.984 - - - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
8. npc1 ENSDARG00000017180 3724 1.781 - - - - 0.968 0.813 - - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
9. maf1 ENSDARG00000013122 3365 1.774 - 0.795 - - 0.979 - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
10. ash2l ENSDARG00000060392 4916 1.736 - 0.783 - - 0.953 - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
11. nrg2a ENSDARG00000077818 854 1.731 - 0.739 - - 0.992 - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
12. sox5 ENSDARG00000011582 3632 1.72 - 0.780 - - 0.940 - - - - SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
13. nrp1a ENSDARG00000102153 4154 1.72 - - - - 0.845 - 0.875 - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
14. spata13 ENSDARG00000062837 5330 1.718 - - - - 0.952 - 0.766 - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
15. col16a1 ENSDARG00000009194 5600 1.717 - 0.738 - - 0.979 - - - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
16. twist1a ENSDARG00000030402 3748 1.715 - 0.804 - - - - 0.911 - - twist family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-000210-6]
17. nol12 ENSDARG00000038027 2288 1.715 - - - - 0.957 - 0.758 - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
18. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.711 - 0.787 - - 0.924 - - - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
19. arglu1a ENSDARG00000019223 8716 1.705 - 0.756 - - 0.949 - - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
20. 5S_rRNA_21 5S_rRNA_21 1323 1.7 - - - - 0.985 0.715 - - -
21. errfi1 errfi1 979 1.694 - - - - 0.992 - 0.702 - -
22. notch2 ENSDARG00000043130 4430 1.69 - - - - 0.960 - 0.730 - - notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
23. snx1a ENSDARG00000071031 3975 1.685 - - - - 0.977 - 0.708 - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
24. ywhag1 ENSDARG00000067626 3786 1.682 - - - - 0.963 - 0.719 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011115-1]
25. dio3b ENSDARG00000095767 521 1.679 - - - - - 0.807 0.872 - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
26. aip ENSDARG00000104437 3574 1.679 - - - - 0.937 - 0.742 - - aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
27. slc39a5 ENSDARG00000079525 2157 1.673 - - - - - 0.858 0.815 - - solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
28. elmod2 ENSDARG00000101669 3101 1.661 - 0.832 - - - - 0.829 - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
29. riok1 ENSDARG00000016399 936 1.657 - 0.807 - - 0.850 - - - - RIO kinase 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1927]
30. BX005001.1 BX005001.1 741 1.648 - - - - - 0.761 0.887 - -
31. pum1 ENSDARG00000099256 5017 1.645 - 0.895 - - - - 0.750 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
32. tmem251 ENSDARG00000042341 1102 1.643 - 0.806 - - - - 0.837 - - transmembrane protein 251 [Source:ZFIN;Acc:ZDB-GENE-041001-121]
33. PPFIBP1_1 PPFIBP1_1 2256 1.639 - - - - - 0.783 0.856 - -
34. trpm7 ENSDARG00000036232 925 1.636 - 0.896 - - - - 0.740 - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
35. pck1 ENSDARG00000013522 1657 1.629 - - - - - 0.794 0.835 - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
36. BX004812.1 ENSDARG00000096968 5467 1.611 - - - - - 0.860 0.751 - -
37. cdh6 ENSDARG00000014522 5492 1.582 - - - - - 0.732 0.850 - - cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]
38. ythdf1 ENSDARG00000016447 3391 1.563 - 0.839 - - - - 0.724 - - YTH N(6)-methyladenosine RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]
39. tnpo2 ENSDARG00000038239 2469 1.562 - 0.817 - - - - 0.745 - - transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
40. ttk ENSDARG00000041361 3911 1.561 - 0.735 - - 0.826 - - - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
41. asmtl ENSDARG00000021433, ENSDARG00000114151 550 1.56 - - - - - 0.706 0.854 - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
42. arpc5b ENSDARG00000019062 2786 1.558 - 0.789 - - - 0.769 - - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
43. sgms1 ENSDARG00000029621 6376 1.557 - - - - 0.823 0.734 - - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
44. noc2l ENSDARG00000001754, ENSDARG00000116544 1004 1.553 - 0.756 - - - - 0.797 - - NOC2-like nucleolar associated transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-000607-75]
45. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 1.553 - - - - - 0.798 0.755 - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
46. foxi3a ENSDARG00000055926 749 1.552 - 0.799 - - - 0.753 - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
47. gata5 ENSDARG00000017821 1146 1.552 - - - - - 0.746 0.806 - - GATA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-980526-340]
48. sphk2 ENSDARG00000069893 1518 1.545 - 0.821 - - - 0.724 - - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
49. numb ENSDARG00000027279 2905 1.545 - - - - - 0.792 0.753 - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
50. ino80c ENSDARG00000055719 1512 1.541 - 0.765 - - - 0.776 - - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
51. raraa ENSDARG00000056783 1404 1.54 0.758 0.782 - - - - - - - retinoic acid receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-980526-284]
52. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.537 - - - - - 0.765 0.772 - - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
53. sptbn2 ENSDARG00000053956 8452 1.537 - 0.810 - - - 0.727 - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
54. slc30a8 ENSDARG00000100917 761 1.537 - - - - - 0.803 0.734 - - solute carrier family 30 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060315-10]
55. nav2b ENSDARG00000001879 1121 1.533 - 0.733 - - - - 0.800 - - neuron navigator 2b [Source:ZFIN;Acc:ZDB-GENE-061207-13]
56. jam2b ENSDARG00000079071 1031 1.53 - - - - - - 0.819 0.711 - junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
57. smpd1 ENSDARG00000076121 584 1.52 - 0.799 - - - - 0.721 - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
58. TCIRG1 TCIRG1 875 1.519 - - - - - 0.762 0.757 - -
59. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.519 - 0.817 - - - 0.702 - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
60. FNIP2 FNIP2 593 1.516 - 0.767 - - - - 0.749 - -
61. hoga1 ENSDARG00000018944 800 1.515 - 0.808 - - - - 0.707 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
62. CU469577.1 ENSDARG00000102850 1232 1.515 - 0.715 - - - 0.800 - - -
63. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.508 - 0.771 - - - - 0.737 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
64. zgc:158403 ENSDARG00000062757 710 1.506 - 0.700 - - - - 0.806 - - zgc:158403 [Source:ZFIN;Acc:ZDB-GENE-061215-116]
65. camk2n1a ENSDARG00000025855 1467 1.499 - - - - - 0.778 0.721 - - calcium/calmodulin-dependent protein kinase II inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-319]
66. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 1.498 - - - - - 0.746 0.752 - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
67. ces3 ENSDARG00000041595, ENSDARG00000114555 647 1.49 - 0.729 - - - 0.761 - - - carboxylesterase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9563]
68. slc43a2a ENSDARG00000036848 6798 1.488 - - - - - 0.746 0.742 - - solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
69. sp4 ENSDARG00000005186 2904 1.482 - 0.739 - - - - 0.743 - - sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
70. tpbgb ENSDARG00000037186 1216 1.479 - 0.765 - - - 0.714 - - - trophoblast glycoprotein b [Source:ZFIN;Acc:ZDB-GENE-091218-2]
71. dpydb ENSDARG00000010267 831 1.478 - 0.774 - - - 0.704 - - - dihydropyrimidine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-2459]
72. galcb ENSDARG00000016474 615 1.476 - - - - - 0.736 0.740 - - galactosylceramidase b [Source:ZFIN;Acc:ZDB-GENE-040426-2115]
73. ATXN7 ENSDARG00000074804 1137 1.471 - 0.760 - - - 0.711 - - - ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]
74. etv5b ENSDARG00000044511, ENSDARG00000113744 1967 1.467 - - - - - 0.759 0.708 - - ets variant 5b [Source:ZFIN;Acc:ZDB-GENE-991228-4]
75. stat4 ENSDARG00000028731 146 1.461 - - - - - 0.753 0.708 - - signal transducer and activator of transcription 4 [Source:ZFIN;Acc:ZDB-GENE-030616-264]
76. tmem88b ENSDARG00000069388 501 1.461 - - - - - 0.729 0.732 - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
77. si:dkeyp-89c11.2 si:dkeyp-89c11.2 683 1.458 - - - - - 0.706 0.752 - -
78. cgnl1 ENSDARG00000015805 856 1.453 - - - - - 0.702 0.751 - - cingulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-071009-2]
79. AP3B1 2363 1.449 - 0.723 - - - - 0.726 - - adaptor related protein complex 3 beta 1 subunit
80. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.449 - 0.730 - - - - 0.719 - - ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
81. hoxc12a ENSDARG00000070352 7409 1.428 - - - - - 0.722 0.706 - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
82. pbx1a ENSDARG00000100494 854 0.994 - - - - 0.994 - - - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
83. ERO1LB ERO1LB 1433 0.993 - - - - 0.993 - - - -
84. slc48a1b ENSDARG00000026109 1427 0.993 - - - - 0.993 - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
85. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.993 - - - - 0.993 - - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
86. bin2b ENSDARG00000010255 2649 0.993 - - - - 0.993 - - - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
87. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.993 - - - - 0.993 - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
88. ripk4 ENSDARG00000043211 775 0.993 - - - - 0.993 - - - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
89. tmem234 ENSDARG00000078333 488 0.993 - - - - 0.993 - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
90. CABZ01073954.1 CABZ01073954.1 258 0.993 - - - - 0.993 - - - -
91. si:dkey-114e9.1 si:dkey-114e9.1 233 0.993 - - - - 0.993 - - - -
92. si:dkey-30k6.5 ENSDARG00000057238 617 0.992 - - - - 0.992 - - - - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
93. si:dkey-70e17.2 si:dkey-70e17.2 371 0.992 - - - - 0.992 - - - -
94. epc1 epc1 1164 0.992 - - - - 0.992 - - - -
95. kcnq5a ENSDARG00000069954 492 0.992 - - - - 0.992 - - - - potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
96. slc46a1 ENSDARG00000026149 297 0.992 - - - - 0.992 - - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
97. vldlr ENSDARG00000006257 772 0.992 - - - - 0.992 - - - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
98. klf11a ENSDARG00000030844 3972 0.992 - - - - 0.992 - - - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
99. C3H16orf89 C3H16orf89 449 0.991 - - - - 0.991 - - - -
100. trim24 ENSDARG00000103350 431 0.991 - - - - 0.991 - - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]

There are 1225 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA