Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for itga2.1

Gene Name Gene ID Reads Annotation
itga2.1 ENSDARG00000069390 6 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]










Genes with expression patterns similar to itga2.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. itga2.1 ENSDARG00000069390 6 4 - 1.000 - 1.000 - 1.000 - - 1.000 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
2. NINJ1 ENSDARG00000103663 43 1.974 - - - - - 1.000 - - 0.974 ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
3. si:dkey-20i20.12 si:dkey-20i20.12 7 1.939 - 0.943 - - - - - - 0.996
4. ftr58 ENSDARG00000071238 10 1.896 - - - - - 1.000 - - 0.896 finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
5. si:ch211-151h10.2 ENSDARG00000068250 14 1.831 - 0.943 - 0.888 - - - - - si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
6. cpeb4 cpeb4 57 1.826 - 0.883 - - - 0.943 - - -
7. gprc6a ENSDARG00000005371 7 1.746 - 0.943 - - - - - - 0.803 G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
8. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1.736 - 0.943 - - - 0.793 - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
9. TMPRSS7 5 1.72 - 0.943 - - - 0.777 - - - transmembrane protease, serine 7
10. ugt2b5 ugt2b5 17 1.677 - 0.943 - - - 0.734 - - -
11. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1.675 - - - 0.723 - 0.952 - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
12. PGBD4_4 PGBD4_4 15 1.671 - 0.943 - - - - - - 0.728
13. gas5 279 1.564 - 0.711 - - - 0.853 - - - growth arrest-specific 5, transcript variant X4
14. psmc3ip ENSDARG00000037892 214 1.557 - 0.806 - - - 0.751 - - - PSMC3 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040625-125]
15. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 1 - - - - - 1.000 - - - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
16. PRTFDC1 ENSDARG00000011683 11 1 - - - - - 1.000 - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
17. CABZ01112210.1 CABZ01112210.1 48 1 - - - - - 1.000 - - -
18. URB1 ENSDARG00000060308 78 1 - - - - - 1.000 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
19. TMEM121_1 TMEM121_1 22 1 - - - - - 1.000 - - -
20. SUSD1 ENSDARG00000058839 4 1 - - - - - - - - 1.000 sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]
21. oscp1a ENSDARG00000101222, ENSDARG00000104403 17 1 - - - - - 1.000 - - - organic solute carrier partner 1a [Source:ZFIN;Acc:ZDB-GENE-080204-2]
22. trim35-19 ENSDARG00000099639, ENSDARG00000109698 2 1 - - - - - - - - 1.000 tripartite motif containing 35-19 [Source:ZFIN;Acc:ZDB-GENE-070424-178]
23. rhobtb2b ENSDARG00000089340 4 1 - - - - - 1.000 - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
24. syt6a ENSDARG00000076730 4 1 - - - - - 1.000 - - - synaptotagmin VIa [Source:ZFIN;Acc:ZDB-GENE-090601-2]
25. crybb1l2 ENSDARG00000016793 723 1 - - - - - 1.000 - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
26. ccdc14 ENSDARG00000098734 3 1 - - - - - 1.000 - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
27. irf1b ENSDARG00000043249 30 1 - - - - - 1.000 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
28. ccdc41 ccdc41 97 1 - - - - - 1.000 - - -
29. si:ch211-125e6.12 ENSDARG00000092090 3 1 - - - - - 1.000 - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
30. pdk3a ENSDARG00000014527 15 1 - - - - - 1.000 - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
31. il17c ENSDARG00000057180, ENSDARG00000109701 3 1 - - - - - 1.000 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
32. si:ch211-219a15.3 ENSDARG00000087659 12 1 - - - - - 1.000 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
33. CABZ01060813.1 CABZ01060813.1 12 1 - - - - - 1.000 - - -
34. vtg3 ENSDARG00000016448 8 1 - - - - - 1.000 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
35. C12H16orf93 C12H16orf93 1 1 - - - - - 1.000 - - -
36. pigf ENSDARG00000032780 7 1 - - - - - 1.000 - - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
37. TESPA1 ENSDARG00000053311 29 1 - - - - - 1.000 - - - thymocyte expressed, positive selection associated 1 [Source:ZFIN;Acc:ZDB-GENE-120727-10]
38. TGFBR2 TGFBR2 2 1 - - - - - 1.000 - - -
39. FAM196A 82 1 - - - - - 1.000 - - - family with sequence similarity 196 member A
40. NOX4 3 1 - - - - - 1.000 - - - NADPH oxidase 4
41. themis ENSDARG00000010619 5 1 - - - - - 1.000 - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
42. slc25a19 ENSDARG00000100385 2 1 - - - - - 1.000 - - - solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:ZFIN;Acc:ZDB-GENE-050417-292]
43. v2rh11 ENSDARG00000115088 1 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
44. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - - - - - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
45. PLCB2 3 1 - - - - - - - - 1.000 phospholipase C, beta 2
46. CMA1_8 CMA1_8 10 1 - - - - - 1.000 - - -
47. m17 ENSDARG00000035435 28 1 - - - - - 1.000 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
48. CELA1_2 CELA1_2 2 1 - - - - - 1.000 - - -
49. HMGXB3 ENSDARG00000077823 2 1 - - - - - 1.000 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
50. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
51. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
52. si:ch211-147h1.4 ENSDARG00000045157 8 1 - - - - - - - - 1.000 si:ch211-147h1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-228]
53. nkd3l ENSDARG00000070419 2 1 - - - - - - - - 1.000 naked cuticle homolog 3, like [Source:ZFIN;Acc:ZDB-GENE-060503-555]
54. BICD1 BICD1 9 1 - - - - - 1.000 - - -
55. NMI 3 1 - - - - - 1.000 - - - N-myc (and STAT) interactor
56. BX284672.1 BX284672.1 11 1 - - - - - 1.000 - - -
57. PEG3_14 PEG3_14 2 1 - - - - - - - - 1.000
58. BX323793.3 BX323793.3 7 1 - - - - - 1.000 - - -
59. gp1bb ENSDARG00000074441 116 1 - - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
60. POGK POGK 1 1 - - - - - 1.000 - - -
61. si:dkey-204h11.12 si:dkey-204h11.12 3 1 - - - - - - - - 1.000
62. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - 1.000 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
63. trpm5 ENSDARG00000059792 3 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
64. fam166b ENSDARG00000100292 14 1 - - - - - 1.000 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
65. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - - 1.000 - - -
66. BOD1L2 BOD1L2 32 1 - 1.000 - - - - - - -
67. sox11a ENSDARG00000077811 25 1 - - - - - 1.000 - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
68. or115-12 ENSDARG00000044748 2 1 - - - - - 1.000 - - - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
69. CABZ01084273.1 CABZ01084273.1 16 1 - - - - - 1.000 - - -
70. OTOS ENSDARG00000108475 180 1 - - - - - 1.000 - - - otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
71. C1QTNF6 C1QTNF6 2 1 - - - - - 1.000 - - -
72. CR356223.1 ENSDARG00000093865 1 1 - - - - - 1.000 - - -
73. dok1a ENSDARG00000078108 9 1 - - - - - 1.000 - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
74. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 - - - - - - - - 1.000 apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
75. FNDC3A ENSDARG00000105503 11 1 - - - - - 1.000 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
76. BX323854.4 BX323854.4 3 1 - - - - - 1.000 - - -
77. CCL19_1 CCL19_1 40 1 - - - - - - - - 1.000
78. CABZ01053483.1 CABZ01053483.1 5 1 - - - - - - - - 1.000
79. foxi1 ENSDARG00000104566 176 1 - - - - - 1.000 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
80. TSPAN1 ENSDARG00000052027 4 1 - - - - - 1.000 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
81. ZC2HC1C ENSDARG00000070526 14 1 - - - - - 1.000 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
82. irak1 ENSDARG00000025949 19 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
83. thbs4a ENSDARG00000102777 625 1 - - - - - 1.000 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
84. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - 1.000 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
85. syt15 ENSDARG00000079926 8 1 - - - - - 1.000 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
86. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
87. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - 1.000 - - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
88. kcnh3 ENSDARG00000069560 4 1 - - - - - 1.000 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
89. BX004880.2 BX004880.2 83 1 - - - - - 1.000 - - -
90. il12bb ENSDARG00000054542 6 1 - - - - - 1.000 - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
91. si:dkey-112e17.1 ENSDARG00000093201 1 1 - - - - - 1.000 - - - si:dkey-112e17.1 [Source:ZFIN;Acc:ZDB-GENE-060526-193]
92. CT573356.3 CT573356.3 2 1 - - - - - 1.000 - - -
93. olfcg2 ENSDARG00000101083 8 1 - - - - - 1.000 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
94. cldn10l2 ENSDARG00000105042 11 1 - - - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
95. snR50 snR50 1 1 - - - - - 1.000 - - -
96. uts1 ENSDARG00000014927 35 1 - - - - - 1.000 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
97. tbl2 ENSDARG00000043357 125 1 - - - - - 1.000 - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
98. SPTBN4 ENSDARG00000092624 6 0.996 - - - - - - - - 0.996 spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
99. trmt2b ENSDARG00000033967 127 0.994 - 0.994 - - - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
100. rbm27 ENSDARG00000060521 185 0.991 - - - - - 0.991 - - - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]

There are 598 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA