Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for itga1

Gene Name Gene ID Reads Annotation
itga1 ENSDARG00000074316, ENSDARG00000116602 610 integrin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-091118-115]










Genes with expression patterns similar to itga1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. itga1 ENSDARG00000074316, ENSDARG00000116602 610 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 integrin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-091118-115]
2. si:ch73-61d6.3 ENSDARG00000057826 274 1.657 - 0.910 - - - - - 0.747 - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
3. AL954372.1 ENSDARG00000112499 589 1.626 - 0.775 - - - - - 0.851 -
4. slc1a7a ENSDARG00000034940 149 1.582 - 0.747 - - - - 0.835 - - solute carrier family 1 (glutamate transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-061009-24]
5. fmoda ENSDARG00000044895 1835 1.562 - - - - - 0.797 0.765 - - fibromodulin a [Source:ZFIN;Acc:ZDB-GENE-041008-23]
6. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 1.556 - 0.824 - - - - 0.732 - - FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
7. chfr ENSDARG00000075347 664 1.555 - 0.840 - - - - 0.715 - - checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-3522]
8. rc3h1 rc3h1 1087 1.552 - - - - - - 0.788 0.764 -
9. SYCE3 SYCE3 2201 1.548 - - - - - 0.815 0.733 - -
10. clpp ENSDARG00000020679 2125 1.544 - - - - - 0.784 0.760 - - caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7860]
11. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 1.542 - - - - - 0.832 - 0.710 - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
12. PEG3_22 PEG3_22 33 1.54 - 0.778 - - - - 0.762 - -
13. slc6a11a ENSDARG00000074002 189 1.538 - 0.818 - - - - 0.720 - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
14. tbc1d10a tbc1d10a 462 1.537 - 0.793 - - - - - 0.744 -
15. rorab ENSDARG00000001910, ENSDARG00000109324, ENSDARG00000113275 518 1.536 0.776 - - - - - - 0.760 - RAR-related orphan receptor A, paralog b [Source:ZFIN;Acc:ZDB-GENE-040426-855]
16. PIGB ENSDARG00000105011 277 1.516 - 0.755 - - - - 0.761 - - phosphatidylinositol glycan anchor biosynthesis, class B [Source:ZFIN;Acc:ZDB-GENE-040426-1216]
17. arhgap10 ENSDARG00000078326 994 1.515 - 0.713 - - - - 0.802 - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]
18. ino80e ENSDARG00000022939, ENSDARG00000101892 216 1.507 - 0.723 - - - - 0.784 - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
19. mst1ra ENSDARG00000060235 78 1.504 - 0.741 - - - - 0.763 - - macrophage stimulating 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-071218-2]
20. gosr2 ENSDARG00000053070 944 1.503 - - - - - - 0.791 0.712 - golgi SNAP receptor complex member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3290]
21. acaca ENSDARG00000078512, ENSDARG00000114071 386 1.494 - - - - - - 0.737 0.757 - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
22. dpf2 ENSDARG00000012219 666 1.494 - - - - - - 0.756 0.738 - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
23. zgpat ENSDARG00000027403 1071 1.493 0.712 - - - - - - 0.781 - zinc finger, CCCH-type with G patch domain [Source:ZFIN;Acc:ZDB-GENE-040426-1248]
24. thbs3b ENSDARG00000012060 922 1.486 - 0.707 - - - - 0.779 - - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
25. rabgef1l ENSDARG00000015968 38 1.462 - 0.734 - - - - 0.728 - - RAB guanine nucleotide exchange factor (GEF) 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-813]
26. efna1b ENSDARG00000018787 969 1.454 - 0.742 - - - - 0.712 - - ephrin-A1b [Source:ZFIN;Acc:ZDB-GENE-041007-5]
27. MBTD1 ENSDARG00000060868 783 1.453 - - - - - - 0.747 0.706 - mbt domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-138]
28. CR383676.3 CR383676.3 2650 0.922 - - - - - - 0.922 - -
29. mvd mvd 105 0.914 - - - - - - 0.914 - -
30. FP928982.1 FP928982.1 690 0.896 - - - - - - 0.896 - -
31. sema3fa ENSDARG00000011163 759 0.893 - 0.893 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
32. dnajc8 ENSDARG00000059373 1858 0.891 - - - - - - - 0.891 - DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
33. C1H19orf53 C1H19orf53 329 0.889 - - - - - - 0.889 - -
34. PRRT3 PRRT3 195 0.884 - - - - - - - 0.884 -
35. tmem245 ENSDARG00000070455 264 0.883 - 0.883 - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
36. si:dkeyp-38g8.5 ENSDARG00000056954 506 0.878 - 0.878 - - - - - - - si:dkeyp-38g8.5 [Source:ZFIN;Acc:ZDB-GENE-081104-62]
37. rwdd3 ENSDARG00000057315 289 0.874 - 0.874 - - - - - - - RWD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1723]
38. ttc3 ENSDARG00000086075 2157 0.871 - - - - - - - 0.871 - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
39. zgc:110269 ENSDARG00000012325 691 0.87 - - - - - - 0.870 - - zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81]
40. mef2d ENSDARG00000040237 6144 0.868 - - - - - - - 0.868 - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
41. fbxo8 ENSDARG00000007477 603 0.867 - 0.867 - - - - - - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
42. slc35b2 ENSDARG00000007886 310 0.867 - - - - - - 0.867 - - solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 [Source:ZFIN;Acc:ZDB-GENE-050213-1]
43. cenpp ENSDARG00000044135 96 0.866 - 0.866 - - - - - - - centromere protein P [Source:ZFIN;Acc:ZDB-GENE-040801-74]
44. KLHL29_1 KLHL29_1 158 0.866 - - - - - - 0.866 - -
45. rcbtb1 ENSDARG00000036645 255 0.863 - - - - - - 0.863 - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
46. peli2 ENSDARG00000029045 844 0.861 - 0.861 - - - - - - - pellino E3 ubiquitin protein ligase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-360]
47. LSM5 ENSDARG00000071573 371 0.861 - 0.861 - - - - - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
48. zgc:174863 ENSDARG00000099476, ENSDARG00000116416 411 0.86 - - - - - - 0.860 - - zgc:174863 [Source:ZFIN;Acc:ZDB-GENE-080204-87]
49. slc38a10 ENSDARG00000077081 1691 0.859 - - - - - - 0.859 - - solute carrier family 38, member 10 [Source:ZFIN;Acc:ZDB-GENE-050309-21]
50. aff3 ENSDARG00000079575 578 0.858 - - - - - - 0.858 - - AF4/FMR2 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030219-193]
51. arfgef2 ENSDARG00000074702 1593 0.858 - - - - - - - 0.858 - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
52. tyw5 ENSDARG00000069672, ENSDARG00000110022 255 0.855 - - - - - - 0.855 - - tRNA-yW synthesizing protein 5 [Source:ZFIN;Acc:ZDB-GENE-060929-894]
53. exd3 ENSDARG00000063140 119 0.855 - - - - - - 0.855 - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
54. MYH9 MYH9 158 0.855 - 0.855 - - - - - - -
55. tmem222a ENSDARG00000069589 1766 0.854 - - - - - - 0.854 - - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
56. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 0.852 - - - - - - 0.852 - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
57. itga3b ENSDARG00000012824 1872 0.851 - 0.851 - - - - - - - integrin, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-050411-55]
58. fmnl3 ENSDARG00000004372 821 0.851 - - - - - - - 0.851 - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
59. si:dkey-253d23.5 ENSDARG00000058566 237 0.851 - 0.851 - - - - - - - si:dkey-253d23.5 [Source:ZFIN;Acc:ZDB-GENE-050208-729]
60. emc10 ENSDARG00000054793 2315 0.85 - - - - - - 0.850 - - ER membrane protein complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9045]
61. ccdc106 ccdc106 101 0.849 - 0.849 - - - - - - -
62. si:ch211-198e13.3 5 0.849 - 0.849 - - - - - - - si:ch211-198e13.3, transcript variant X1
63. si:ch73-138e16.8 175 0.847 - - - - - - 0.847 - - si:ch73-138e16.8
64. CR759921.2 CR759921.2 583 0.847 - 0.847 - - - - - - -
65. MKL2_1 MKL2_1 292 0.847 - - - - - - 0.847 - -
66. CT573152.3 CT573152.3 206 0.846 - - - - - - 0.846 - -
67. si:ch211-254c8.2 233 0.846 - - - - - - 0.846 - - si:ch211-254c8.2, transcript variant X4
68. slc10a4 ENSDARG00000009131 51 0.846 - 0.846 - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
69. galk1 ENSDARG00000028088 540 0.846 - 0.846 - - - - - - - galactokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-79]
70. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.844 - - - - - - - 0.844 - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
71. rad54l ENSDARG00000018623 837 0.843 - 0.843 - - - - - - - RAD54 like [Source:ZFIN;Acc:ZDB-GENE-040426-968]
72. nob1 ENSDARG00000016080 2483 0.843 - - - - - - 0.843 - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
73. ptpn23b ENSDARG00000098689 351 0.841 - 0.841 - - - - - - - protein tyrosine phosphatase, non-receptor type 23, b [Source:ZFIN;Acc:ZDB-GENE-060503-179]
74. znf644a ENSDARG00000101361 819 0.841 - - - - - - - 0.841 - zinc finger protein 644a [Source:ZFIN;Acc:ZDB-GENE-030131-6244]
75. CT583728.14 ENSDARG00000112295 911 0.84 - - - - - - 0.840 - -
76. anapc7 ENSDARG00000063005 1139 0.84 - - - - - - 0.840 - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
77. arntl1a ENSDARG00000006791 550 0.839 - - - - - - 0.839 - - aryl hydrocarbon receptor nuclear translocator-like 1a [Source:ZFIN;Acc:ZDB-GENE-000509-1]
78. mknk1 ENSDARG00000018411 749 0.839 - 0.839 - - - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
79. CCDC120 ENSDARG00000032856, ENSDARG00000114382 30 0.839 - 0.839 - - - - - - - coiled-coil domain containing 120 [Source:ZFIN;Acc:ZDB-GENE-061027-93]
80. CABZ01072853.1 CABZ01072853.1 35 0.838 - 0.838 - - - - - - -
81. hpx ENSDARG00000012609 93 0.838 - 0.838 - - - - - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
82. cuedc1a ENSDARG00000068716 232 0.837 - 0.837 - - - - - - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
83. si:rp71-61h23.4 1921 0.837 - - - - - - 0.837 - - si:rp71-61h23.4
84. tfpia ENSDARG00000034718 1257 0.836 - 0.836 - - - - - - - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
85. bmb ENSDARG00000096603 120 0.836 - 0.836 - - - - - - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
86. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.835 - 0.835 - - - - - - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
87. spata6 ENSDARG00000021115 128 0.834 - 0.834 - - - - - - - spermatogenesis associated 6 [Source:ZFIN;Acc:ZDB-GENE-050417-351]
88. wnk1b ENSDARG00000039392 3587 0.833 - - - - - - - 0.833 - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
89. CABZ01008011.1 CABZ01008011.1 761 0.833 - - - - - - 0.833 - -
90. rbm34 ENSDARG00000101877 1573 0.832 - - - - - - 0.832 - - RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
91. PARP8 ENSDARG00000059789 264 0.831 - 0.831 - - - - - - - poly (ADP-ribose) polymerase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-060929-432]
92. nrp2b ENSDARG00000038446 783 0.83 - - - - - - 0.830 - - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
93. endog ENSDARG00000058865 679 0.83 - - - - - - 0.830 - - endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
94. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 0.829 - 0.829 - - - - - - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
95. guk1b ENSDARG00000005776 23 0.828 - 0.828 - - - - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
96. deptor ENSDARG00000040930 191 0.828 - - - - - - 0.828 - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
97. myrip ENSDARG00000038814 103 0.828 - 0.828 - - - - - - - myosin VIIA and Rab interacting protein [Source:ZFIN;Acc:ZDB-GENE-080123-1]
98. map4k2l_1 map4k2l_1 77 0.828 - 0.828 - - - - - - -
99. tmeff1a ENSDARG00000008191 74 0.828 - 0.828 - - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
100. bcat1 ENSDARG00000045568 39 0.828 - 0.828 - - - - - - - branched chain amino-acid transaminase 1, cytosolic [Source:ZFIN;Acc:ZDB-GENE-030131-9358]

There are 921 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA