Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for iscub

Gene Name Gene ID Reads Annotation
iscub ENSDARG00000026582, ENSDARG00000115112 147 iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]










Genes with expression patterns similar to iscub

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. iscub ENSDARG00000026582, ENSDARG00000115112 147 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
2. CU929052.1 CU929052.1 642 2.507 0.840 - - - - 0.723 0.944 - -
3. rab4a ENSDARG00000019144 192 2.297 - 0.760 - - - - 0.716 - 0.821 RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
4. gcnt3 ENSDARG00000060471 37 1.835 - - - - 0.891 - 0.944 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
5. QSOX2 ENSDARG00000077174 26 1.779 - - - - 0.909 - 0.870 - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
6. si:ch211-237l4.6 ENSDARG00000056915 49 1.758 0.840 - - - - - 0.918 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
7. zgc:152977 ENSDARG00000077178 59 1.714 - - - - - - 0.944 - 0.770 zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
8. mir301c 84 1.702 - - - - - 0.739 - - 0.963 microRNA 301c
9. CD200_2 CD200_2 47 1.684 0.840 - - - 0.844 - - - -
10. FDXACB1 ENSDARG00000095750 98 1.682 - - - 0.861 - - - - 0.821 ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
11. dnaaf1 ENSDARG00000012030 58 1.669 - 0.761 - - 0.908 - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
12. TBC1D2 ENSDARG00000071304 16 1.667 - - - - - - 0.714 - 0.953 TBC1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-100]
13. ucn3l ENSDARG00000087241 29 1.667 - - - - - 0.723 0.944 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
14. BX890577.2 BX890577.2 94 1.665 - 0.776 - - 0.889 - - - -
15. fuom ENSDARG00000039422 82 1.662 - 0.776 - 0.886 - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
16. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1.634 - - - - 0.911 0.723 - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
17. si:ch211-203k16.3 ENSDARG00000069305 21 1.627 - - - - - 0.723 0.904 - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
18. spp1 ENSDARG00000044276 34 1.615 - 0.865 - - - 0.750 - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
19. nfat5 nfat5 94 1.612 - 0.817 - - - - 0.795 - -
20. si:dkeyp-87a6.2 ENSDARG00000093322 18 1.606 - - - 0.883 - 0.723 - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
21. BX640537.1 ENSDARG00000099408 192 1.602 - - - 0.863 - 0.739 - - -
22. wdr16 wdr16 532 1.595 - - - - 0.749 - - - 0.846
23. nif3l1 ENSDARG00000045249 28 1.594 - - - 0.871 - 0.723 - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
24. AL935174.1 ENSDARG00000109674 18 1.59 0.840 - - - - 0.750 - - -
25. rapgef5b ENSDARG00000074307 112 1.587 - - - - - - 0.763 - 0.824 Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
26. HUS1 ENSDARG00000101611 187 1.585 - - - - - 0.724 - - 0.861 HUS1 checkpoint clamp component [Source:HGNC Symbol;Acc:HGNC:5309]
27. mir196b ENSDARG00000081346 35 1.584 0.840 - - - - - 0.744 - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
28. chid1 ENSDARG00000069673 675 1.584 - 0.748 - 0.836 - - - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
29. zgc:174888 ENSDARG00000077176, ENSDARG00000114997 166 1.584 - 0.737 - 0.847 - - - - - zgc:174888 [Source:ZFIN;Acc:ZDB-GENE-030328-33]
30. cbr4 ENSDARG00000009074 240 1.58 - 0.780 - 0.800 - - - - - carbonyl reductase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1796]
31. C21H11orf82 C21H11orf82 50 1.575 - - - - 0.780 - 0.795 - -
32. hoxd12a ENSDARG00000059263 795 1.571 - 0.758 - - - - 0.813 - - homeobox D12a [Source:ZFIN;Acc:ZDB-GENE-990415-118]
33. TULP1_1 TULP1_1 260 1.558 - 0.722 - 0.836 - - - - -
34. ncdn ENSDARG00000098544 267 1.552 - - - 0.827 - - - - 0.725 neurochondrin [Source:ZFIN;Acc:ZDB-GENE-061220-6]
35. CU694256.1 ENSDARG00000097007 290 1.547 - 0.781 - - - 0.766 - - -
36. pigu ENSDARG00000075530 348 1.532 - - - 0.803 - - - - 0.729 phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
37. PLCL2 ENSDARG00000098826 596 1.515 - - - 0.728 - - 0.787 - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
38. IFI30 ENSDARG00000056378, ENSDARG00000112359 73 1.501 - - - - - 0.782 - - 0.719 interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
39. il17d ENSDARG00000010700, ENSDARG00000115462 102 1.472 - 0.701 - - 0.771 - - - - interleukin 17d [Source:ZFIN;Acc:ZDB-GENE-061031-4]
40. CABZ01077217.1_1 ENSDARG00000079145 184 1.468 0.764 0.704 - - - - - - - uncharacterized LOC100007503 [Source:NCBI gene;Acc:100007503]
41. bmp7b ENSDARG00000063230 337 1.467 - - - 0.712 0.755 - - - - bone morphogenetic protein 7b [Source:ZFIN;Acc:ZDB-GENE-060929-328]
42. si:dkey-10p5.10 ENSDARG00000099307 371 1.463 - 0.738 - 0.725 - - - - - si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
43. sin3aa ENSDARG00000079716 580 1.434 - - - 0.721 - - 0.713 - - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
44. atg9b ENSDARG00000055292 155 1.433 0.710 - - - - 0.723 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
45. ripply1 ENSDARG00000054103 367 1.416 - - - - 0.708 - - - 0.708 ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
46. fgf19 ENSDARG00000098663 12 0.97 - - - - - - - - 0.970 fibroblast growth factor 19 [Source:ZFIN;Acc:ZDB-GENE-030729-32]
47. CABZ01084323.1 ENSDARG00000104937 5 0.963 - - - - - - - - 0.963 protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
48. SLC35D3 ENSDARG00000107442 12 0.963 - - - - - - - - 0.963 solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
49. si:dkey-216e24.4 si:dkey-216e24.4 14 0.963 - - - - - - - - 0.963
50. RNaseP_nuc RNaseP_nuc 7 0.963 - - - - - - - - 0.963
51. cth1 ENSDARG00000057328 13 0.963 - - - - - - - - 0.963 cysteine three histidine 1 [Source:ZFIN;Acc:ZDB-GENE-990806-20]
52. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 0.963 - - - - - - - - 0.963
53. si:dkey-22l1.1 ENSDARG00000096743 5 0.963 - - - - - - - - 0.963 si:dkey-22l1.1 [Source:ZFIN;Acc:ZDB-GENE-130603-74]
54. si:dkey-7e14.3 ENSDARG00000086055 50 0.962 - - - - - - 0.962 - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
55. ENSDARG00000091313 ENSDARG00000091313 6 0.962 - - - - - - - - 0.962
56. CR847504.1 ENSDARG00000102515 29 0.961 - - - - - - 0.961 - -
57. CR854923.1 CR854923.1 18 0.961 - - - - - - 0.961 - -
58. tbx18 ENSDARG00000036930 390 0.961 - - - - - - 0.961 - - T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
59. stub1 ENSDARG00000045228 105 0.96 - - - - - - - - 0.960 STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
60. drd4-rs ENSDARG00000001912 45 0.959 - - - - - - 0.959 - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
61. si:ch211-202m22.1 ENSDARG00000094491 24 0.956 - - - - - - - - 0.956 si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
62. f2rl1.1 ENSDARG00000068856 47 0.953 - - - - - - 0.953 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
63. ABHD12B_1 ABHD12B_1 57 0.951 - - - - - - 0.951 - -
64. oprk1 ENSDARG00000006894 43 0.951 - - - - - - 0.951 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
65. fgf10b ENSDARG00000100475 17 0.951 - - - - - - 0.951 - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
66. fem1a ENSDARG00000067966 11 0.951 - - - - - - - - 0.951 fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
67. si:ch211-223a21.3 ENSDARG00000104737 28 0.95 - - - - - - - - 0.950 si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
68. ubtd1b ENSDARG00000079623 26 0.948 - - - - - - - - 0.948 ubiquitin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050913-62]
69. CABZ01111953.1 ENSDARG00000099747 38 0.948 - - - - - - 0.948 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
70. BX510934.1 ENSDARG00000087544 140 0.947 - - - - - - 0.947 - -
71. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 0.947 - - - - - - - - 0.947 methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
72. phf21aa ENSDARG00000006878 31 0.944 - - - - - - 0.944 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
73. si:dkey-286j17.3 si:dkey-286j17.3 8 0.944 - - - - - - 0.944 - -
74. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 0.944 - - - - - - 0.944 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
75. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 0.944 - - - - - - 0.944 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
76. XKR8 XKR8 9 0.944 - - - - - - 0.944 - -
77. dbpa ENSDARG00000063014 107 0.944 - - - - - - 0.944 - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
78. PGBD4_4 PGBD4_4 15 0.944 - - - - - - 0.944 - -
79. BX511021.2 ENSDARG00000097646 5 0.944 - - - - - - 0.944 - -
80. pigr ENSDARG00000101890 10 0.944 - - - - - - 0.944 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
81. il11a ENSDARG00000037859 5 0.944 - - - - - - 0.944 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
82. si:dkey-47k20.6 si:dkey-47k20.6 2 0.944 - - - - - - 0.944 - -
83. U1_35 U1_35 1 0.944 - - - - - - 0.944 - -
84. cyp2n13 ENSDARG00000042953 10 0.944 - - - - - - 0.944 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
85. si:dkey-122c11.1 ENSDARG00000093747 19 0.944 - - - - - - 0.944 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
86. CU104716.2 CU104716.2 10 0.944 - - - - - - 0.944 - -
87. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 0.944 - - - - - - 0.944 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
88. zp2.5 ENSDARG00000086522 15 0.944 - - - - - - 0.944 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
89. si:ch1073-181h11.2 ENSDARG00000103883 24 0.944 - - - - - - 0.944 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
90. si:dkey-150h13.1 si:dkey-150h13.1 1 0.944 - - - - - - 0.944 - -
91. fbxo32 ENSDARG00000040277 93 0.944 - - - - - - 0.944 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
92. grtp1b ENSDARG00000030269 24 0.944 - - - - - - 0.944 - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
93. si:dkey-148e22.3 si:dkey-148e22.3 4 0.944 - - - - - - 0.944 - -
94. lratb 3 0.944 - - - - - - 0.944 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
95. zgc:152938 ENSDARG00000102586 97 0.944 - - - - - - 0.944 - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
96. irx4a ENSDARG00000035648 71 0.944 - - - - - - 0.944 - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
97. CR762480.5 CR762480.5 1 0.944 - - - - - - 0.944 - -
98. CELA1 CELA1 14 0.944 - - - - - - 0.944 - -
99. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.944 - - - - - - 0.944 - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
100. si:ch211-190k17.13 si:ch211-190k17.13 48 0.944 - - - - - - 0.944 - -

There are 1329 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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