Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for iscub

Gene Name Gene ID Reads Annotation
iscub ENSDARG00000026582, ENSDARG00000115112 147 iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]










Genes with expression patterns similar to iscub

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. iscub ENSDARG00000026582, ENSDARG00000115112 147 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
2. CU929052.1 CU929052.1 642 2.507 0.840 - - - - 0.723 0.944 - -
3. rab4a ENSDARG00000019144 192 2.297 - 0.760 - - - - 0.716 - 0.821 RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
4. gcnt3 ENSDARG00000060471 37 1.835 - - - - 0.891 - 0.944 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
5. QSOX2 ENSDARG00000077174 26 1.779 - - - - 0.909 - 0.870 - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
6. si:ch211-237l4.6 ENSDARG00000056915 49 1.758 0.840 - - - - - 0.918 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
7. zgc:152977 ENSDARG00000077178 59 1.714 - - - - - - 0.944 - 0.770 zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
8. mir301c 84 1.702 - - - - - 0.739 - - 0.963 microRNA 301c
9. CD200_2 CD200_2 47 1.684 0.840 - - - 0.844 - - - -
10. FDXACB1 ENSDARG00000095750 98 1.682 - - - 0.861 - - - - 0.821 ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
11. dnaaf1 ENSDARG00000012030 58 1.669 - 0.761 - - 0.908 - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
12. TBC1D2 ENSDARG00000071304 16 1.667 - - - - - - 0.714 - 0.953 TBC1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-100]
13. ucn3l ENSDARG00000087241 29 1.667 - - - - - 0.723 0.944 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
14. BX890577.2 BX890577.2 94 1.665 - 0.776 - - 0.889 - - - -
15. fuom ENSDARG00000039422 82 1.662 - 0.776 - 0.886 - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
16. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1.634 - - - - 0.911 0.723 - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
17. si:ch211-203k16.3 ENSDARG00000069305 21 1.627 - - - - - 0.723 0.904 - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
18. spp1 ENSDARG00000044276 34 1.615 - 0.865 - - - 0.750 - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
19. nfat5 nfat5 94 1.612 - 0.817 - - - - 0.795 - -
20. si:dkeyp-87a6.2 ENSDARG00000093322 18 1.606 - - - 0.883 - 0.723 - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
21. BX640537.1 ENSDARG00000099408 192 1.602 - - - 0.863 - 0.739 - - -
22. wdr16 wdr16 532 1.595 - - - - 0.749 - - - 0.846
23. nif3l1 ENSDARG00000045249 28 1.594 - - - 0.871 - 0.723 - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
24. AL935174.1 ENSDARG00000109674 18 1.59 0.840 - - - - 0.750 - - -
25. rapgef5b ENSDARG00000074307 112 1.587 - - - - - - 0.763 - 0.824 Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
26. HUS1 ENSDARG00000101611 187 1.585 - - - - - 0.724 - - 0.861 HUS1 checkpoint clamp component [Source:HGNC Symbol;Acc:HGNC:5309]
27. mir196b ENSDARG00000081346 35 1.584 0.840 - - - - - 0.744 - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
28. chid1 ENSDARG00000069673 675 1.584 - 0.748 - 0.836 - - - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
29. zgc:174888 ENSDARG00000077176, ENSDARG00000114997 166 1.584 - 0.737 - 0.847 - - - - - zgc:174888 [Source:ZFIN;Acc:ZDB-GENE-030328-33]
30. cbr4 ENSDARG00000009074 240 1.58 - 0.780 - 0.800 - - - - - carbonyl reductase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1796]
31. C21H11orf82 C21H11orf82 50 1.575 - - - - 0.780 - 0.795 - -
32. hoxd12a ENSDARG00000059263 795 1.571 - 0.758 - - - - 0.813 - - homeobox D12a [Source:ZFIN;Acc:ZDB-GENE-990415-118]
33. TULP1_1 TULP1_1 260 1.558 - 0.722 - 0.836 - - - - -
34. ncdn ENSDARG00000098544 267 1.552 - - - 0.827 - - - - 0.725 neurochondrin [Source:ZFIN;Acc:ZDB-GENE-061220-6]
35. CU694256.1 ENSDARG00000097007 290 1.547 - 0.781 - - - 0.766 - - -
36. pigu ENSDARG00000075530 348 1.532 - - - 0.803 - - - - 0.729 phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
37. PLCL2 ENSDARG00000098826 596 1.515 - - - 0.728 - - 0.787 - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
38. IFI30 ENSDARG00000056378, ENSDARG00000112359 73 1.501 - - - - - 0.782 - - 0.719 interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
39. il17d ENSDARG00000010700, ENSDARG00000115462 102 1.472 - 0.701 - - 0.771 - - - - interleukin 17d [Source:ZFIN;Acc:ZDB-GENE-061031-4]
40. CABZ01077217.1_1 ENSDARG00000079145 184 1.468 0.764 0.704 - - - - - - - uncharacterized LOC100007503 [Source:NCBI gene;Acc:100007503]
41. bmp7b ENSDARG00000063230 337 1.467 - - - 0.712 0.755 - - - - bone morphogenetic protein 7b [Source:ZFIN;Acc:ZDB-GENE-060929-328]
42. si:dkey-10p5.10 ENSDARG00000099307 371 1.463 - 0.738 - 0.725 - - - - - si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
43. sin3aa ENSDARG00000079716 580 1.434 - - - 0.721 - - 0.713 - - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
44. atg9b ENSDARG00000055292 155 1.433 0.710 - - - - 0.723 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
45. ripply1 ENSDARG00000054103 367 1.416 - - - - 0.708 - - - 0.708 ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
46. fgf19 ENSDARG00000098663 12 0.97 - - - - - - - - 0.970 fibroblast growth factor 19 [Source:ZFIN;Acc:ZDB-GENE-030729-32]
47. CABZ01084323.1 ENSDARG00000104937 5 0.963 - - - - - - - - 0.963 protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
48. SLC35D3 ENSDARG00000107442 12 0.963 - - - - - - - - 0.963 solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
49. si:dkey-216e24.4 si:dkey-216e24.4 14 0.963 - - - - - - - - 0.963
50. cth1 ENSDARG00000057328 13 0.963 - - - - - - - - 0.963 cysteine three histidine 1 [Source:ZFIN;Acc:ZDB-GENE-990806-20]
51. RNaseP_nuc RNaseP_nuc 7 0.963 - - - - - - - - 0.963
52. si:dkey-22l1.1 ENSDARG00000096743 5 0.963 - - - - - - - - 0.963 si:dkey-22l1.1 [Source:ZFIN;Acc:ZDB-GENE-130603-74]
53. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 0.963 - - - - - - - - 0.963
54. si:dkey-7e14.3 ENSDARG00000086055 50 0.962 - - - - - - 0.962 - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
55. ENSDARG00000091313 ENSDARG00000091313 6 0.962 - - - - - - - - 0.962
56. CR847504.1 ENSDARG00000102515 29 0.961 - - - - - - 0.961 - -
57. CR854923.1 CR854923.1 18 0.961 - - - - - - 0.961 - -
58. tbx18 ENSDARG00000036930 390 0.961 - - - - - - 0.961 - - T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
59. stub1 ENSDARG00000045228 105 0.96 - - - - - - - - 0.960 STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
60. drd4-rs ENSDARG00000001912 45 0.959 - - - - - - 0.959 - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
61. si:ch211-202m22.1 ENSDARG00000094491 24 0.956 - - - - - - - - 0.956 si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
62. f2rl1.1 ENSDARG00000068856 47 0.953 - - - - - - 0.953 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
63. ABHD12B_1 ABHD12B_1 57 0.951 - - - - - - 0.951 - -
64. fgf10b ENSDARG00000100475 17 0.951 - - - - - - 0.951 - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
65. fem1a ENSDARG00000067966 11 0.951 - - - - - - - - 0.951 fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
66. oprk1 ENSDARG00000006894 43 0.951 - - - - - - 0.951 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
67. si:ch211-223a21.3 ENSDARG00000104737 28 0.95 - - - - - - - - 0.950 si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
68. ubtd1b ENSDARG00000079623 26 0.948 - - - - - - - - 0.948 ubiquitin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050913-62]
69. CABZ01111953.1 ENSDARG00000099747 38 0.948 - - - - - - 0.948 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
70. BX510934.1 ENSDARG00000087544 140 0.947 - - - - - - 0.947 - -
71. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 0.947 - - - - - - - - 0.947 methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
72. CELA1 CELA1 14 0.944 - - - - - - 0.944 - -
73. si:ch211-190k17.13 si:ch211-190k17.13 48 0.944 - - - - - - 0.944 - -
74. traf1 ENSDARG00000069482 50 0.944 - - - - - - 0.944 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
75. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.944 - - - - - - 0.944 - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
76. si:ch73-77n15.1 si:ch73-77n15.1 2 0.944 - - - - - - 0.944 - -
77. cx55.5 13 0.944 - - - - - - 0.944 - - connexin 55.5, transcript variant X1
78. top3b ENSDARG00000027586 8 0.944 - - - - - - 0.944 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
79. b3gat3 ENSDARG00000001939 58 0.944 - - - - - - 0.944 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
80. zgc:173443 ENSDARG00000034403 26 0.944 - - - - - - 0.944 - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
81. si:dkeyp-91h9.1 si:dkeyp-91h9.1 2 0.944 - - - - - - 0.944 - -
82. CR854891.1 CR854891.1 7 0.944 - - - - - - 0.944 - -
83. nanog ENSDARG00000075113 10 0.944 - - - - - - 0.944 - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
84. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 0.944 - - - - - - 0.944 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
85. pdcb ENSDARG00000017634 10 0.944 - - - - - - 0.944 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
86. si:ch211-10j20.7 si:ch211-10j20.7 8 0.944 - - - - - - 0.944 - -
87. avpr2aa ENSDARG00000007436 43 0.944 - - - - - - 0.944 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
88. urgcp ENSDARG00000036767 6 0.944 - - - - - - 0.944 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
89. grk7b ENSDARG00000055534 17 0.944 - - - - - - 0.944 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
90. wnt3a ENSDARG00000058822 5 0.944 - - - - - - 0.944 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
91. C25H12orf29 C25H12orf29 31 0.944 - - - - - - 0.944 - -
92. si:ch73-248e21.5 ENSDARG00000088283 19 0.944 - - - - - - 0.944 - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
93. ubr1 ENSDARG00000060480 71 0.944 - - - - - - 0.944 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
94. pxn pxn 10 0.944 - - - - - - 0.944 - -
95. zgc:172133 ENSDARG00000075248 6 0.944 - - - - - - 0.944 - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
96. lzts2b ENSDARG00000077207 22 0.944 - - - - - - 0.944 - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
97. EP400 ENSDARG00000100965 45 0.944 - - - - - - 0.944 - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
98. pkhd1l1 ENSDARG00000091116 23 0.944 - - - - - - 0.944 - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
99. irgq2 ENSDARG00000068657 4 0.944 - - - - - - 0.944 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
100. PCDH10 PCDH10 7 0.944 - - - - - - 0.944 - -

There are 1329 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA