Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for isca1

Gene Name Gene ID Reads Annotation
isca1 ENSDARG00000051956 5855 iron-sulfur cluster assembly 1 [Source:ZFIN;Acc:ZDB-GENE-050626-94]










Genes with expression patterns similar to isca1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. isca1 ENSDARG00000051956 5855 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iron-sulfur cluster assembly 1 [Source:ZFIN;Acc:ZDB-GENE-050626-94]
2. ass1 8099 3.423 - - 0.841 - 0.775 0.957 0.850 - - argininosuccinate synthase 1
3. aldh4a1 ENSDARG00000038207 4639 3.375 - - 0.887 - 0.832 0.770 - - 0.886 aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
4. sb:cb37 ENSDARG00000041645 2018 2.801 0.924 0.942 - - - 0.935 - - - sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
5. epas1a ENSDARG00000008697 3225 2.701 - 0.898 0.900 - - 0.903 - - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
6. cfb ENSDARG00000055278, ENSDARG00000110358 1725 2.667 0.814 - - - - 0.956 0.897 - - complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
7. GTSF1L GTSF1L 2089 2.644 - - 0.911 - - 0.847 - - 0.886
8. erlin1 ENSDARG00000021991 5664 2.63 - 0.967 0.900 - - 0.763 - - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
9. npc1 ENSDARG00000017180 3724 2.623 0.826 - - - - 0.893 0.904 - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
10. CABZ01059390.1 CABZ01059390.1 4340 2.618 - 0.943 - - - 0.863 0.812 - -
11. diabloa ENSDARG00000104172 2192 2.583 0.761 0.886 - - - 0.936 - - - diablo, IAP-binding mitochondrial protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1303]
12. tmem176l.4 ENSDARG00000074390 1886 2.565 - 0.944 - - - 0.740 - - 0.881 transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
13. atp1b3a ENSDARG00000015790 12310 2.546 - - 0.787 - - 0.866 0.893 - - ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
14. elovl5 ENSDARG00000004979 3032 2.525 - 0.780 - - 0.827 0.918 - - - ELOVL fatty acid elongase 5 [Source:ZFIN;Acc:ZDB-GENE-040407-2]
15. gskip ENSDARG00000038099 5059 2.48 - 0.791 - - 0.797 0.892 - - - gsk3b interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2777]
16. slc43a2a ENSDARG00000036848 6798 2.435 - - - - 0.763 0.902 0.770 - - solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
17. pla2g12b ENSDARG00000015662 27239 2.417 - - - - 0.700 0.931 0.786 - - phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
18. cst3 ENSDARG00000007795 13753 2.378 0.705 - - - 0.810 0.863 - - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
19. abcb5 ENSDARG00000021787 2875 2.359 0.734 - - - - 0.732 0.893 - - ATP-binding cassette, sub-family B (MDR/TAP), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6414]
20. cdc42bpb ENSDARG00000019383 5976 2.326 0.733 - - - - 0.749 0.844 - - CDC42 binding protein kinase beta (DMPK-like) [Source:ZFIN;Acc:ZDB-GENE-030131-3647]
21. sord ENSDARG00000053405 2406 2.314 0.728 - - - - 0.881 0.705 - - sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
22. lect2l ENSDARG00000033227 482 2.26 0.710 - - - - 0.834 0.716 - - leukocyte cell-derived chemotaxin 2 like [Source:ZFIN;Acc:ZDB-GENE-070127-4]
23. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 30071 2.231 - 0.726 - - - 0.804 0.701 - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
24. f2 ENSDARG00000036041 3129 1.898 - - - - - 0.962 0.936 - - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
25. gnpda2 ENSDARG00000024443 6637 1.882 - - - - - 0.951 0.931 - - glucosamine-6-phosphate deaminase 2 [Source:ZFIN;Acc:ZDB-GENE-091117-41]
26. CFI 3801 1.877 - - - - - 0.966 0.911 - - complement factor I
27. fam20a ENSDARG00000079486 1199 1.877 - 0.951 - - - 0.926 - - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]
28. ces2 ENSDARG00000041569, ENSDARG00000110630 5541 1.864 - - - - - 0.923 0.941 - - carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
29. cfh ENSDARG00000100442, ENSDARG00000109660 2043 1.863 - - - - - 0.917 0.946 - - complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661]
30. prr12a ENSDARG00000074229 1668 1.856 - 0.949 0.907 - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
31. sfxn2 ENSDARG00000017960, ENSDARG00000111267 3869 1.842 - - - - - 0.923 0.919 - - sideroflexin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2831]
32. im:7136729 im:7136729 1625 1.841 - 0.942 0.899 - - - - - -
33. rgs12b ENSDARG00000036774 5088 1.84 - 0.950 - - - - - - 0.890 regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
34. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.837 - - - - - 0.932 - - 0.905 ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
35. rab5c ENSDARG00000026712 4733 1.835 - 0.909 0.926 - - - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
36. abca1b ENSDARG00000079009 14119 1.833 - - - - - 0.894 0.939 - - ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
37. aqr ENSDARG00000016775 1581 1.83 - 0.926 0.904 - - - - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
38. atpif1a 6030 1.827 - 0.936 0.891 - - - - - - ATPase inhibitory factor 1a
39. myl9b ENSDARG00000008030 7830 1.826 - - - - - 0.946 0.880 - - myosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
40. jhdm1da jhdm1da 512 1.826 - 0.942 - - - - - - 0.884
41. nme3 ENSDARG00000100990 3889 1.823 - - 0.901 - - 0.922 - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
42. chpfa ENSDARG00000078392 1427 1.812 - 0.947 - - - - - - 0.865 chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]
43. cyp2aa8 ENSDARG00000104540 2947 1.81 - - - - - 0.955 0.855 - - cytochrome P450, family 2, subfamily AA, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-041010-183]
44. pex14 ENSDARG00000028322 1087 1.804 - 0.947 - - - 0.857 - - - peroxisomal biogenesis factor 14 [Source:ZFIN;Acc:ZDB-GENE-060130-169]
45. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 1.798 - - 0.933 - - 0.865 - - - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
46. pik3r1 ENSDARG00000038524 3615 1.79 - 0.956 - - - 0.834 - - - phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-1280]
47. OMG OMG 1202 1.781 - 0.935 - - - 0.846 - - -
48. CNDP1 CNDP1 6456 1.777 - - - - - 0.936 0.841 - -
49. taldo1 ENSDARG00000103369 3804 1.775 - - - - - 0.915 0.860 - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
50. sardh ENSDARG00000058102, ENSDARG00000112110 2150 1.773 0.819 - - - - 0.954 - - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
51. mthfd1l ENSDARG00000042221, ENSDARG00000110473 19571 1.771 - 0.868 - - - 0.903 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
52. clcn5 clcn5 492 1.771 - 0.947 - - - 0.824 - - -
53. atp6ap1b ENSDARG00000037153 3970 1.768 - 0.925 - - - 0.843 - - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
54. VMA21 ENSDARG00000093945, ENSDARG00000113532 7555 1.766 0.849 - - - - 0.917 - - - VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081104-272]
55. rpe ENSDARG00000005251, ENSDARG00000117024 3865 1.764 - 0.900 - - - 0.864 - - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
56. st14a ENSDARG00000061173 3800 1.752 0.853 - 0.899 - - - - - - suppression of tumorigenicity 14 (colon carcinoma) a [Source:ZFIN;Acc:ZDB-GENE-030131-6496]
57. hsd17b14 ENSDARG00000054842 1394 1.75 0.799 0.951 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
58. APOB APOB 33858 1.746 - - - - - 0.955 0.791 - -
59. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 1.746 - 0.964 - - - 0.782 - - - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
60. cd2ap ENSDARG00000015224 2830 1.746 - 0.952 - - - 0.794 - - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
61. fga ENSDARG00000020741 5580 1.741 - - - - - 0.957 0.784 - - fibrinogen alpha chain [Source:ZFIN;Acc:ZDB-GENE-031010-21]
62. pcbd1 ENSDARG00000031981 3373 1.739 0.825 - - - - 0.914 - - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
63. apoa1b ENSDARG00000101324 336817 1.737 - - - - - 0.912 0.825 - - apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
64. apoeb ENSDARG00000040295 229165 1.736 - - - - - 0.903 0.833 - - apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
65. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.736 - 0.868 0.868 - - - - - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
66. hnrpdl 14288 1.731 - 0.857 0.874 - - - - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
67. prdx5 ENSDARG00000055064 27445 1.726 - - - - - 0.953 0.773 - - peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
68. fuca2 ENSDARG00000044073, ENSDARG00000115098 1199 1.726 0.861 - - - - 0.865 - - - alpha-L-fucosidase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-39]
69. bhmt ENSDARG00000013430 91357 1.725 - - - - - 0.828 0.897 - - betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
70. zgc:85975 4738 1.722 - - - - - 0.873 - - 0.849 zgc:85975
71. dmgdh ENSDARG00000025703 6088 1.714 0.796 - - - - - 0.918 - - dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
72. efhd2 ENSDARG00000055759 7777 1.712 0.825 - - - - - 0.887 - - EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
73. APOA4 APOA4 20822 1.712 - - - - - 0.866 0.846 - -
74. cry3_1 cry3_1 3347 1.711 - - - - - 0.839 0.872 - -
75. padi2 ENSDARG00000044167 6765 1.708 - 0.942 - - - - - - 0.766 peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
76. zgc:152830 ENSDARG00000079932 12194 1.708 - - - - 0.848 0.860 - - - zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
77. epdl2 ENSDARG00000055539 1895 1.705 - - - - - 0.863 0.842 - - ependymin-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-250]
78. FAM110D FAM110D 3632 1.704 - - - - - 0.827 - - 0.877
79. acsl4a ENSDARG00000004078 4241 1.702 0.798 - - - - 0.904 - - - acyl-CoA synthetase long chain family member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1565]
80. mid1ip1l ENSDARG00000018145 2789 1.702 0.765 - - - - 0.937 - - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
81. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.7 - 0.956 0.744 - - - - - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
82. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 1.699 0.794 - - - - 0.905 - - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
83. tpst1 ENSDARG00000073872 2490 1.697 - 0.959 - - - 0.738 - - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
84. ctsla ENSDARG00000007836 67814 1.697 - - - - - 0.935 0.762 - - cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
85. zgc:162608 ENSDARG00000069375 2881 1.693 - - - - - 0.879 0.814 - - zgc:162608 [Source:ZFIN;Acc:ZDB-GENE-070410-86]
86. aqp12 ENSDARG00000043279 1881 1.692 0.764 - - - - 0.928 - - - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
87. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 1.692 0.862 - - - - 0.830 - - - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
88. appl1 1019 1.691 - 0.944 - - - 0.747 - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
89. sat1a.1 ENSDARG00000035652 2941 1.689 - - - - 0.755 0.934 - - - spermidine/spermine N1-acetyltransferase 1a, duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-41]
90. shmt1 ENSDARG00000052816 5463 1.689 0.746 - - - - 0.943 - - - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
91. cask cask 3384 1.688 - - - - 0.797 0.891 - - -
92. znf185 ENSDARG00000103917 7195 1.685 - - - - - - 0.846 - 0.839 zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
93. arhgef25b ENSDARG00000014465 669 1.685 - - - - - 0.810 - - 0.875 Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
94. C20H6orf58 C20H6orf58 1105 1.684 - - - - - 0.847 0.837 - -
95. snx10a ENSDARG00000004405 329 1.68 0.730 - - - - 0.950 - - - sorting nexin 10a [Source:ZFIN;Acc:ZDB-GENE-050809-44]
96. stxbp5b ENSDARG00000029234 760 1.679 - 0.945 - - - 0.734 - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
97. esrp1 ENSDARG00000011245 2097 1.677 - 0.959 - - - 0.718 - - - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
98. pikfyve ENSDARG00000056112 1583 1.676 - 0.955 - - - 0.721 - - - phosphoinositide kinase, FYVE finger containing [Source:ZFIN;Acc:ZDB-GENE-030131-9636]
99. zgc:136410 ENSDARG00000102241 8433 1.675 - - - - - 0.937 0.738 - - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
100. ppifb ENSDARG00000052842 3533 1.673 - - 0.921 - - 0.752 - - - peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]

There are 1396 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA