Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for irx6a

Gene Name Gene ID Reads Annotation
irx6a ENSDARG00000034420 29 iroquois homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040712-5]










Genes with expression patterns similar to irx6a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irx6a ENSDARG00000034420 29 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 iroquois homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040712-5]
2. ahr1b ENSDARG00000023537 44 2.298 - 0.851 - - - - - 0.707 0.740 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
3. CU694320.1 CU694320.1 6 1.751 - 1.000 0.751 - - - - - -
4. foxf2b ENSDARG00000070389 67 1.713 - 1.000 - - 0.713 - - - - forkhead box F2b [Source:ZFIN;Acc:ZDB-GENE-041001-130]
5. si:ch211-155o21.4 ENSDARG00000096567 25 1.672 0.866 - 0.806 - - - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
6. RFTN1 RFTN1 140 1.632 0.743 0.889 - - - - - - -
7. CHCHD5 ENSDARG00000091754 35 1.617 0.845 0.772 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
8. dscamb ENSDARG00000028118 82 1.56 - 0.856 - - - - - 0.704 - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
9. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.536 - - - - - - - 0.768 0.768 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
10. si:dkey-21o19.2 ENSDARG00000088900 52 1.533 - - - - - - - 0.771 0.762 si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
11. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1.518 - - - - - - - 0.780 0.738 ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
12. ndrg1b ENSDARG00000010420 116 1.506 - - - - - - - 0.751 0.755 N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
13. vmhc 234 1.499 0.764 - - - 0.735 - - - - ventricular myosin heavy chain
14. prdm1b ENSDARG00000098925 440 1.489 - 0.761 - - - - - - 0.728 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
15. pcdh8 ENSDARG00000006467 317 1.471 - - - - - - - 0.761 0.710 protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
16. si:ch73-108h4.3 si:ch73-108h4.3 193 1.442 0.714 0.728 - - - - - - -
17. DNAH3 ENSDARG00000068468 3 1 - 1.000 - - - - - - - dynein axonemal heavy chain 3 [Source:ZFIN;Acc:ZDB-GENE-091112-7]
18. KSR1 KSR1 8 1 - 1.000 - - - - - - -
19. si:dkeyp-59a8.3 si:dkeyp-59a8.3 3 1 - 1.000 - - - - - - -
20. cyp2aa2 ENSDARG00000104811 77 1 - 1.000 - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
21. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1 - 1.000 - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
22. cacna2d2 cacna2d2 16 1 - 1.000 - - - - - - -
23. SNORA77 SNORA77 2 1 - 1.000 - - - - - - -
24. BX004873.1 ENSDARG00000100864 2 1 - 1.000 - - - - - - -
25. ARHGEF38 ENSDARG00000079377 9 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
26. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 1 - 1.000 - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
27. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 1 - 1.000 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
28. pxn pxn 10 1 - 1.000 - - - - - - -
29. cldn15b ENSDARG00000101109 4 1 - 1.000 - - - - - - - claudin 15b [Source:ZFIN;Acc:ZDB-GENE-060421-7652]
30. si:dkey-56e5.2 si:dkey-56e5.2 14 1 - 1.000 - - - - - - -
31. slc34a1a ENSDARG00000028824 35 1 - 1.000 - - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
32. si:dkey-29j8.5 si:dkey-29j8.5 9 1 - 1.000 - - - - - - -
33. si:zfos-1505d6.3 ENSDARG00000089966 3 1 - 1.000 - - - - - - - si:zfos-1505d6.3 [Source:ZFIN;Acc:ZDB-GENE-120214-22]
34. PEG3_9 PEG3_9 3 1 - 1.000 - - - - - - -
35. dre-mir-196c dre-mir-196c 2 1 - 1.000 - - - - - - -
36. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 - 1.000 - - - - - - -
37. si:ch211-136m16.8 ENSDARG00000090767 91 1 - 1.000 - - - - - - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
38. si:dkey-222f2.6 si:dkey-222f2.6 1 1 - 1.000 - - - - - - -
39. ACP2 ENSDARG00000007244 6 1 - 1.000 - - - - - - - acid phosphatase 2, lysosomal [Source:ZFIN;Acc:ZDB-GENE-050306-40]
40. MTMR3 ENSDARG00000093364, ENSDARG00000098201 11 1 - 1.000 - - - - - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
41. mlphb ENSDARG00000062481 14 1 - 1.000 - - - - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
42. b3gat1 b3gat1 77 1 - 1.000 - - - - - - -
43. KCNJ12 KCNJ12 17 1 - 1.000 - - - - - - -
44. asb11 ENSDARG00000056561 39 1 - 1.000 - - - - - - - ankyrin repeat and SOCS box containing 11 [Source:ZFIN;Acc:ZDB-GENE-070112-532]
45. cyp46a2 cyp46a2 38 1 - 1.000 - - - - - - -
46. hist2h3c_1 ENSDARG00000094154 45 1 - 1.000 - - - - - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
47. psmb11 psmb11 5 1 - 1.000 - - - - - - -
48. lyst ENSDARG00000008575, ENSDARG00000113634 55 1 - 1.000 - - - - - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]
49. si:dkey-256h2.1 ENSDARG00000021849 38 1 - 1.000 - - - - - - - si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
50. TOR4A_1 TOR4A_1 20 1 - 1.000 - - - - - - -
51. si:ch211-219a15.3 ENSDARG00000087659 12 1 - 1.000 - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
52. NDUFA4L2 1 1 - 1.000 - - - - - - - NDUFA4, mitochondrial complex associated like 2
53. si:dkeyp-41f9.3 ENSDARG00000075600 2 1 - 1.000 - - - - - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
54. MUC5B MUC5B 1 1 - 1.000 - - - - - - -
55. exosc4 ENSDARG00000103432 21 1 - 1.000 - - - - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
56. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
57. ADAP2 ENSDARG00000070565 29 1 - 1.000 - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
58. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 - 1.000 - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
59. btr09 ENSDARG00000054805, ENSDARG00000115798 20 1 - 1.000 - - - - - - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
60. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - 1.000 - - - - - - -
61. Metazoa_SRP_24 Metazoa_SRP_24 4 1 - 1.000 - - - - - - -
62. mrc1b ENSDARG00000038822 73 1 - 1.000 - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
63. arhgap23b ENSDARG00000026840 6 1 - 1.000 - - - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
64. si:dkey-56d12.4 ENSDARG00000070845 2 1 - 1.000 - - - - - - - si:dkey-56d12.4 [Source:ZFIN;Acc:ZDB-GENE-060531-147]
65. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1 - 1.000 - - - - - - - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
66. hid1b ENSDARG00000100583 35 1 - 1.000 - - - - - - - HID1 domain containing b [Source:ZFIN;Acc:ZDB-GENE-040718-239]
67. or115-14 ENSDARG00000094235 17 1 - 1.000 - - - - - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
68. si:dkey-204h11.12 si:dkey-204h11.12 3 1 - 1.000 - - - - - - -
69. kcnh2 kcnh2 76 1 - 1.000 - - - - - - -
70. U3_1 U3_1 61 1 - 1.000 - - - - - - -
71. iqcd ENSDARG00000035551 7 1 - 1.000 - - - - - - - IQ motif containing D [Source:ZFIN;Acc:ZDB-GENE-060526-200]
72. PARP14 PARP14 164 1 - 1.000 - - - - - - -
73. si:dkey-25i10.3 si:dkey-25i10.3 5 1 - 1.000 - - - - - - -
74. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
75. cbln2b ENSDARG00000077151 38 1 - 1.000 - - - - - - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
76. NELL2A ENSDARG00000090690 840 1 - 1.000 - - - - - - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
77. AL928852.1 AL928852.1 23 1 - 1.000 - - - - - - -
78. BX571712.3 ENSDARG00000098050 1 1 - 1.000 - - - - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
79. UNC13C 119 1 - 1.000 - - - - - - - unc-13 homolog C (C. elegans)
80. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 - 1.000 - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
81. itgbl1 ENSDARG00000040985 705 1 - 1.000 - - - - - - - integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
82. TXNRD2 TXNRD2 14 1 - 1.000 - - - - - - -
83. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - 1.000 - - - - - - -
84. si:ch211-67f13.8 ENSDARG00000079155 7 1 - 1.000 - - - - - - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
85. SLC13A5 SLC13A5 31 1 - 1.000 - - - - - - -
86. CU179643.1 ENSDARG00000086489 25 1 - 1.000 - - - - - - -
87. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1 - 1.000 - - - - - - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
88. SNORA7 SNORA7 100 1 - 1.000 - - - - - - -
89. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - 1.000 - - - - - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
90. TENM2_1 ENSDARG00000037122 67 1 - 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
91. BX005364.1 ENSDARG00000092439 1 1 - 1.000 - - - - - - -
92. CABZ01048675.1 CABZ01048675.1 4 1 - 1.000 - - - - - - -
93. AL929580.1 AL929580.1 1 1 - 1.000 - - - - - - -
94. crhbp ENSDARG00000024831 63 1 - 1.000 - - - - - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
95. lratb 3 1 - 1.000 - - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
96. si:ch211-57m13.1 ENSDARG00000095927 1 1 - 1.000 - - - - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
97. si:dkey-206f10.1 ENSDARG00000032838 18 1 - 1.000 - - - - - - - si:dkey-206f10.1 [Source:ZFIN;Acc:ZDB-GENE-041014-154]
98. si:dkey-103k4.5 si:dkey-103k4.5 11 1 - 1.000 - - - - - - -
99. fancm ENSDARG00000103933 1 1 - 1.000 - - - - - - - FA complementation group M [Source:ZFIN;Acc:ZDB-GENE-090929-1]
100. si:dkey-238f9.1 ENSDARG00000079446 51 1 - 1.000 - - - - - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]

There are 614 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA