Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for irx5a

Gene Name Gene ID Reads Annotation
irx5a ENSDARG00000034043 1694 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]










Genes with expression patterns similar to irx5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irx5a ENSDARG00000034043 1694 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
2. tgif1 ENSDARG00000059337 4020 3.926 - - 0.709 0.737 0.859 - 0.732 0.889 - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
3. st8sia2 ENSDARG00000018788 2183 3.325 - - 0.745 0.788 - 0.856 - - 0.936 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
4. pou4f2 ENSDARG00000069737 451 3.276 - 0.849 - - - 0.742 0.789 - 0.896 POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
5. mdkb ENSDARG00000020708 5393 3.255 - - - - 0.941 0.846 0.713 - 0.755 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
6. apex1 ENSDARG00000045843 6345 3.1 - - 0.703 0.714 0.951 - 0.732 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
7. tmpob ENSDARG00000022978 8121 3.014 - - 0.701 - - 0.715 0.778 0.820 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
8. npas3b npas3b 1446 2.963 - - - 0.743 - 0.702 0.761 - 0.757
9. phf10 ENSDARG00000070084 1210 2.665 - - - - - 0.753 - 0.981 0.931 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
10. mafg2 mafg2 1041 2.578 - 0.784 - - - 0.870 - - 0.924
11. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.546 - - - - 0.982 0.834 0.730 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
12. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.528 - - - - - 0.850 0.795 - 0.883 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
13. clstn2 ENSDARG00000060637 548 2.514 - - - - - 0.836 0.713 0.965 - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
14. ek1 ENSDARG00000020080 742 2.512 - - - - - 0.799 0.733 0.980 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
15. CYTH2 ENSDARG00000028800 2349 2.498 - - - - - 0.824 0.724 0.950 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
16. TNRC6C_2 TNRC6C_2 2444 2.491 - - - - - 0.822 0.735 0.934 -
17. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.472 - - - 0.743 - 0.862 - - 0.867 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
18. gad2 ENSDARG00000015537 724 2.457 - - - - - 0.742 0.857 - 0.858 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
19. pacsin1b ENSDARG00000042128 1051 2.451 - - - - - 0.778 0.748 0.925 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
20. mex3b ENSDARG00000058369 1867 2.45 - - - - - 0.774 0.780 - 0.896 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
21. olfm1b ENSDARG00000014053 1392 2.447 - - - - - 0.775 0.712 0.960 - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
22. nrn1a ENSDARG00000071860 1311 2.445 - - - - - 0.837 0.748 - 0.860 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
23. AKT3 AKT3 1729 2.443 - - - - - 0.791 0.755 - 0.897
24. elovl4a ENSDARG00000006773 412 2.436 - 0.750 - - - - 0.722 0.964 - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
25. cd99l2 ENSDARG00000056722 5036 2.432 - - - - - 0.848 0.793 - 0.791 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
26. JHDM1D JHDM1D 2277 2.417 - - - - - 0.705 - 0.893 0.819
27. thsd7ba ENSDARG00000095022 231 2.405 - - - - - 0.758 0.725 - 0.922 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
28. pdlim5a ENSDARG00000101777 357 2.405 - - - - - 0.772 0.718 - 0.915 PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
29. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.398 - - - - 0.881 0.717 - 0.800 - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
30. stmn1b ENSDARG00000033655 9491 2.393 - - - - - 0.830 0.774 - 0.789 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
31. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 2.39 - - - - - 0.734 0.744 - 0.912 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
32. her15.2 her15.2 1701 2.376 - - - - - 0.809 0.716 - 0.851
33. xpr1 xpr1 840 2.366 - - - - - 0.756 0.777 - 0.833
34. ADAM22 ENSDARG00000060532 2259 2.364 - - - - - 0.855 0.778 - 0.731 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
35. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.356 - - - 0.838 - 0.754 0.764 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
36. stmn2a ENSDARG00000033234 2272 2.356 - - - - - 0.829 0.731 - 0.796 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
37. SNAP91 ENSDARG00000098809 556 2.354 - - - - - 0.740 0.702 - 0.912 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
38. ZFHX3 ENSDARG00000103057 7759 2.352 - - 0.757 - - 0.829 0.766 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
39. sox2 ENSDARG00000070913 2763 2.351 - - - 0.773 - 0.815 0.763 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
40. MAP4 MAP4 315 2.348 - 0.851 - - - 0.789 0.708 - -
41. zic1 ENSDARG00000015567 2520 2.343 - - - 0.811 - 0.819 0.713 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
42. pspc1 ENSDARG00000006621 966 2.342 - - - 0.722 - 0.741 - - 0.879 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
43. aldocb ENSDARG00000019702 2111 2.342 - - - - - 0.783 0.739 0.820 - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
44. rusc1 ENSDARG00000078125 617 2.32 - - - - - 0.702 0.704 - 0.914 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
45. nrarpb ENSDARG00000018958 6225 2.319 - - - 0.736 - 0.809 0.774 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
46. si:ch73-21g5.7 ENSDARG00000093156 9412 2.319 - - 0.704 - - 0.849 0.766 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
47. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 2.309 - - - - - - 0.743 0.838 0.728 YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
48. TUBA1A ENSDARG00000001889 25294 2.291 - - - 0.708 - 0.795 0.788 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
49. ptprna ENSDARG00000058646 1327 2.289 - - 0.757 - - 0.805 0.727 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
50. fabp7a ENSDARG00000007697 5211 2.289 - - - 0.853 - - 0.709 0.727 - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
51. plp1a ENSDARG00000103732 3544 2.287 - - - - - 0.823 0.747 - 0.717 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
52. tmeff1b ENSDARG00000056740 11253 2.286 - - - - - 0.728 0.725 0.833 - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
53. irx1b ENSDARG00000056594 2224 2.28 - - - - - 0.708 0.753 - 0.819 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
54. tmem47 ENSDARG00000057322 4691 2.279 - 0.720 - - - 0.790 0.769 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
55. myt1b ENSDARG00000102879 5411 2.274 - - - - - 0.808 0.729 - 0.737 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
56. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.269 - - - - - 0.832 0.722 - 0.715 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
57. VWA7 ENSDARG00000061462 816 2.268 - 0.761 - 0.781 - 0.726 - - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
58. msi1 ENSDARG00000010710 2634 2.228 - - - - - 0.721 0.753 - 0.754 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
59. hmgb1b ENSDARG00000030479 10398 2.19 - - 0.745 - - - 0.733 0.712 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
60. nova2 ENSDARG00000017673 7685 2.162 - - - - - 0.706 0.740 - 0.716 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
61. supt16h ENSDARG00000079949 4755 1.863 - - - - 0.946 - - - 0.917 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
62. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.86 - - - - - - - 0.965 0.895 CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
63. loxl1 ENSDARG00000054451 2485 1.841 - 0.871 - - 0.970 - - - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
64. UBL4A UBL4A 1115 1.824 - - - - - - - 0.924 0.900
65. bbip1 ENSDARG00000071046, ENSDARG00000112897, ENSDARG00000116522 1062 1.82 - - - - - - - 0.943 0.877 BBSome interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050208-445]
66. prpf4bb ENSDARG00000040310 2260 1.81 - - - - - - - 0.968 0.842 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
67. txnl4a ENSDARG00000036190 2048 1.81 - - - - - - - 0.887 0.923 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
68. apopt1 ENSDARG00000092473 682 1.804 - - - - - - - 0.902 0.902 apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
69. CABZ01072954.1 CABZ01072954.1 2330 1.783 - - - - - 0.823 - 0.960 -
70. xylt1 ENSDARG00000061248 2357 1.783 - - - - - 0.858 - 0.925 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
71. atcaya ENSDARG00000071678 344 1.781 - - - - - 0.809 - 0.972 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
72. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.779 - - - - - - - 0.904 0.875 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
73. asnsd1 830 1.774 - - - - - 0.802 - 0.972 - asparagine synthetase domain containing 1, transcript variant X1
74. gbp ENSDARG00000040059 1939 1.774 - - - - 0.983 - 0.791 - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
75. LEPROTL1 ENSDARG00000104871 3019 1.769 - - - - 0.971 - - - 0.798 leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
76. elavl1 11672 1.761 - - - - 0.807 - - 0.954 - ELAV like RNA binding protein 1, transcript variant X3
77. ctnnbip1 ENSDARG00000038954 2519 1.758 - - - - 0.989 - - - 0.769 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
78. caly ENSDARG00000036008 1002 1.753 - - - - - 0.829 - - 0.924 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
79. kif5aa ENSDARG00000098936 2428 1.746 - - - - - 0.845 - 0.901 - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
80. ubtf ENSDARG00000035066 4070 1.744 - - - - 0.977 0.767 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
81. nexmifb ENSDARG00000029296 416 1.743 - - - - - 0.797 - 0.946 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
82. btg2 ENSDARG00000020298 6616 1.737 - - - - 0.926 0.811 - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
83. onecutl ENSDARG00000040253 2143 1.736 - - - - - 0.765 - 0.971 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
84. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 1.735 - - - 0.751 0.984 - - - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
85. pou4f1 ENSDARG00000005559 821 1.734 - - - - 0.983 - 0.751 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
86. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 1.732 - - - - 0.981 0.751 - - - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
87. AP3B2 1874 1.729 - - - - 0.885 0.844 - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
88. bcl11ab ENSDARG00000063153 3032 1.725 - - - 0.860 - 0.865 - - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
89. snrnp70 ENSDARG00000077126 5921 1.721 - - - - 0.986 - - - 0.735 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
90. st8sia5 ENSDARG00000036584 529 1.72 - - - - - 0.799 - - 0.921 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
91. NHS NHS 409 1.715 - - - - - 0.802 - - 0.913
92. phc2b_1 ENSDARG00000013224 1316 1.715 - - - - - 0.774 - - 0.941 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
93. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.713 - - - - - 0.748 - 0.965 - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
94. cadpsb ENSDARG00000070567 458 1.712 - - - - - - 0.756 0.956 - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
95. dido1 ENSDARG00000057940 3819 1.712 - - - - 0.950 - - - 0.762 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
96. PROSER1 ENSDARG00000086302 1935 1.708 - - - - - - - 0.895 0.813 proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
97. stk35l ENSDARG00000057497 3582 1.702 - - - - - - 0.750 0.952 - serine/threonine kinase 35, like [Source:ZFIN;Acc:ZDB-GENE-041212-52]
98. prox1a ENSDARG00000055158 1411 1.702 - - - - 0.981 0.721 - - - prospero homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-397]
99. hoxa3a ENSDARG00000103862 2239 1.701 - - - - - - 0.771 0.930 - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
100. tpst1 ENSDARG00000073872 2490 1.701 - - - - - - - 0.822 0.879 tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]

There are 2482 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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