Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for irx4b

Gene Name Gene ID Reads Annotation
irx4b ENSDARG00000036051 54 iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]










Genes with expression patterns similar to irx4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irx4b ENSDARG00000036051 54 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]
2. tnni2a.3 ENSDARG00000013752 15 2.714 - 1.000 0.741 - - - 0.973 - - troponin I type 2a (skeletal, fast), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040718-80]
3. CU183952.2 CU183952.2 6 2 - 1.000 - - - - 1.000 - -
4. cyth4b ENSDARG00000103984 27 1.922 - 1.000 - - - - 0.922 - - cytohesin 4b [Source:ZFIN;Acc:ZDB-GENE-080219-45]
5. nanog ENSDARG00000075113 10 1.912 - 1.000 - - - - - 0.912 - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
6. prkar2ab ENSDARG00000009477 2 1.912 - 1.000 - - - - - 0.912 - protein kinase, cAMP-dependent, regulatory, type II, alpha, B [Source:ZFIN;Acc:ZDB-GENE-040426-2427]
7. pcsk7 ENSDARG00000069968 5 1.912 - 1.000 - - - - - 0.912 - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
8. BX004964.1 ENSDARG00000097134 1 1.91 - 1.000 - - - - - - 0.910
9. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1.91 - 1.000 - - - - - - 0.910 calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
10. si:ch211-204a13.1 si:ch211-204a13.1 6 1.91 - 1.000 - - - - - - 0.910
11. kcnh3 ENSDARG00000069560 4 1.91 - 1.000 - - - - - - 0.910 potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
12. GSC2 GSC2 3 1.862 - - - - - - - 0.940 0.922
13. TCF24 ENSDARG00000086944 518 1.832 - - - - - - - 0.962 0.870 transcription factor 24 [Source:HGNC Symbol;Acc:HGNC:32275]
14. strn4 ENSDARG00000102902 24 1.822 - - - - - - - 0.912 0.910 striatin, calmodulin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-070501-3]
15. znf804b ENSDARG00000103396 11 1.722 - 1.000 - - 0.722 - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
16. si:dkey-205h13.2 ENSDARG00000089429 71 1.704 - - - - - - 0.879 0.825 - si:dkey-205h13.2 [Source:ZFIN;Acc:ZDB-GENE-080225-18]
17. zgc:171626 zgc:171626 42 1.634 - - 0.719 - - - 0.915 - -
18. C1S_1 C1S_1 11 1.624 - 0.714 - - - - - - 0.910
19. cart4 ENSDARG00000070142 55 1.604 - - - - - - - 0.809 0.795 cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
20. wu:fe36b12 wu:fe36b12 118 1.596 0.874 - - - - - 0.722 - -
21. aox3 aox3 399 1.531 0.794 - 0.737 - - - - - -
22. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1.507 - - 0.741 - - - - 0.766 - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
23. sox14 ENSDARG00000070929 352 1.479 0.765 0.714 - - - - - - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
24. si:dkeyp-46h3.2 ENSDARG00000092498 23 1 - - - - - - 1.000 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
25. LPHN2_1 LPHN2_1 3 1 - 1.000 - - - - - - -
26. vmhcl 119 1 - - - - - - 1.000 - - ventricular myosin heavy chain-like
27. AVPR1A AVPR1A 116 1 - 1.000 - - - - - - -
28. CR847844.5 CR847844.5 5 1 - 1.000 - - - - - - -
29. CT573389.1 CT573389.1 26 1 - - - - - - 1.000 - -
30. CR628365.1 ENSDARG00000097736 29 1 - 1.000 - - - - - - -
31. zgc:113098 zgc:113098 22 1 - - - - - - 1.000 - -
32. CR848784.2 ENSDARG00000111157 16 1 - - - - - - 1.000 - -
33. si:busm1-71b9.3 11 1 - 1.000 - - - - - - - si:busm1-71b9.3, transcript variant X4
34. myh11a ENSDARG00000009782 80 1 - 1.000 - - - - - - - myosin, heavy chain 11a, smooth muscle [Source:ZFIN;Acc:ZDB-GENE-050531-1]
35. camk1db ENSDARG00000017446 47 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
36. si:dkey-207j16.8 si:dkey-207j16.8 0 1 - 1.000 - - - - - - -
37. mettl8 ENSDARG00000017359 36 1 - 1.000 - - - - - - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
38. adat3 ENSDARG00000005640 96 1 - - - - - - 1.000 - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
39. si:ch211-221e5.1 si:ch211-221e5.1 2 1 - 1.000 - - - - - - -
40. pole2 ENSDARG00000100028 42 1 - 1.000 - - - - - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
41. taar19o ENSDARG00000093266, ENSDARG00000116999 1 1 - - - - - - 1.000 - - trace amine associated receptor 19o [Source:ZFIN;Acc:ZDB-GENE-060414-13]
42. TRMT12 ENSDARG00000060338 58 1 - 1.000 - - - - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
43. vti1a ENSDARG00000045065 7 1 - 1.000 - - - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
44. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - 1.000 - - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
45. MYCT1 MYCT1 64 1 - 1.000 - - - - - - -
46. pdgfb pdgfb 5 1 - 1.000 - - - - - - -
47. TTC40 TTC40 1 1 - 1.000 - - - - - - -
48. si:ch211-264e16.2 ENSDARG00000094415 4 1 - - - - - - 1.000 - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
49. IL17RA_1 IL17RA_1 39 1 - 1.000 - - - - - - -
50. si:dkey-83m22.8 si:dkey-83m22.8 1 1 - 1.000 - - - - - - -
51. wu:fb63c12 26 1 - 1.000 - - - - - - - wu:fb63c12
52. CR936337.1 CR936337.1 38 1 - 1.000 - - - - - - -
53. CT573248.1 ENSDARG00000074029 10 1 - 1.000 - - - - - - -
54. fth1b ENSDARG00000007975 96 1 - 1.000 - - - - - - - ferritin, heavy polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040912-30]
55. BX470083.4 ENSDARG00000115059 8 1 - 1.000 - - - - - - -
56. BX511172.1 BX511172.1 1 1 - 1.000 - - - - - - -
57. DMXL2 ENSDARG00000091293 3 1 - 1.000 - - - - - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
58. zgc:172139 ENSDARG00000068830 10 1 - - - - - - 1.000 - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
59. VDAC3 ENSDARG00000003695 34 1 - 1.000 - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
60. cdhr1a ENSDARG00000004643 7 1 - 1.000 - - - - - - - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
61. SLITRK4 ENSDARG00000079781 54 1 - 1.000 - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
62. DLGAP2 DLGAP2 36 1 - 1.000 - - - - - - -
63. si:dkey-246g23.2 ENSDARG00000062964 5 1 - 1.000 - - - - - - - si:dkey-246g23.2 [Source:ZFIN;Acc:ZDB-GENE-050419-100]
64. CU861664.1 CU861664.1 53 1 - 1.000 - - - - - - -
65. CU464087.2 CU464087.2 15 1 - 1.000 - - - - - - -
66. diaph2 ENSDARG00000076060 26 1 - - - - - - 1.000 - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
67. napgl napgl 39 1 - 1.000 - - - - - - -
68. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - 1.000 - - - - - - -
69. si:dkey-31m5.3 ENSDARG00000110121 1 1 - - - - - - 1.000 - - si:dkey-31m5.3 [Source:ZFIN;Acc:ZDB-GENE-070912-515]
70. KLHL38 KLHL38 15 1 - 1.000 - - - - - - -
71. svopa ENSDARG00000056833 14 1 - 1.000 - - - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
72. BX072576.1 ENSDARG00000078204 12 1 - 1.000 - - - - - - - beta-2 adrenergic receptor-like [Source:NCBI gene;Acc:101885642]
73. si:dkey-103e21.5 ENSDARG00000091926, ENSDARG00000110300 12 1 - 1.000 - - - - - - - si:dkey-103e21.5 [Source:ZFIN;Acc:ZDB-GENE-060526-186]
74. si:ch211-251p5.3 si:ch211-251p5.3 39 1 - 1.000 - - - - - - -
75. zgc:112332 ENSDARG00000058966, ENSDARG00000113930 126 1 - 1.000 - - - - - - - zgc:112332 [Source:ZFIN;Acc:ZDB-GENE-050522-387]
76. CIT_1 CIT_1 6 1 - 1.000 - - - - - - -
77. lgi3 ENSDARG00000041358 46 1 - 1.000 - - - - - - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
78. slc1a1 ENSDARG00000020212 104 1 - 1.000 - - - - - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
79. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1 - 1.000 - - - - - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
80. CU457819.2 ENSDARG00000105374 8 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
81. atl1 ENSDARG00000060481 251 1 - 1.000 - - - - - - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
82. KCNT2 ENSDARG00000075812 23 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
83. BX324215.3 BX324215.3 12 1 - 1.000 - - - - - - -
84. si:dkey-281i15.9 si:dkey-281i15.9 1 1 - 1.000 - - - - - - -
85. TAF2_1 TAF2_1 222 1 - 1.000 - - - - - - -
86. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - 1.000 - - - - - - -
87. TRIM14_10 TRIM14_10 9 1 - 1.000 - - - - - - -
88. CRELD1 794 1 - 1.000 - - - - - - - cysteine rich with EGF like domains 1
89. SLCO5A1 SLCO5A1 6 1 - 1.000 - - - - - - -
90. ZNF337_16 ZNF337_16 22 1 - - - - - - 1.000 - -
91. runx2b ENSDARG00000059233 106 1 - - - - - - 1.000 - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
92. AKNA_1 AKNA_1 2 1 - 1.000 - - - - - - -
93. BX927064.1 BX927064.1 46 1 - 1.000 - - - - - - -
94. map3k12 ENSDARG00000103651 3 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 12 [Source:ZFIN;Acc:ZDB-GENE-040426-2436]
95. cbln4 ENSDARG00000061240 67 1 - 1.000 - - - - - - - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
96. pcsk2 ENSDARG00000019451 442 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
97. ccdc147 ccdc147 39 1 - 1.000 - - - - - - -
98. irf4a ENSDARG00000006560 4 1 - 1.000 - - - - - - - interferon regulatory factor 4a [Source:ZFIN;Acc:ZDB-GENE-070912-330]
99. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1 - 1.000 - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
100. slc34a1b ENSDARG00000054658 1 1 - 1.000 - - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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