Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for irx4a

Gene Name Gene ID Reads Annotation
irx4a ENSDARG00000035648 71 iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]










Genes with expression patterns similar to irx4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irx4a ENSDARG00000035648 71 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
2. CABZ01081747.2 CABZ01081747.2 9 1.925 - - - - - 1.000 0.925 - -
3. crfb16 ENSDARG00000075181 40 1.777 - - - - 0.777 1.000 - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
4. si:ch73-189n23.1 ENSDARG00000086247 15 1.747 - - 0.747 - - - 1.000 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
5. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1.734 - - 0.734 - - 1.000 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
6. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1.715 - - - - - 1.000 - - 0.715 solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
7. BX510934.1 ENSDARG00000087544 140 1.702 - - - - - 0.759 0.943 - -
8. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1.688 - - - - - 0.819 0.869 - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
9. samd7 ENSDARG00000060354 15 1.63 - - - - - - - 0.806 0.824 sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]
10. ocstamp ENSDARG00000022139, ENSDARG00000114094 12 1.594 - - 0.704 - - - 0.890 - - osteoclast stimulatory transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050327-65]
11. fam19a4b ENSDARG00000062471 3 1.587 - - - - - - - 0.720 0.867 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4b [Source:ZFIN;Acc:ZDB-GENE-061013-164]
12. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.582 - - - - - - - 0.706 0.876 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
13. nkx2.1a nkx2.1a 156 1.545 - - - - - - - 0.760 0.785
14. ptf1a ENSDARG00000014479 349 1.543 - - - - - - - 0.715 0.828 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
15. npb ENSDARG00000078828 230 1.52 - - - - - - 0.801 - 0.719 neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
16. Metazoa_SRP_20 Metazoa_SRP_20 2 1.484 - - 0.747 - - 0.737 - - -
17. si:dkey-20i20.8 ENSDARG00000071714, ENSDARG00000094343 41 1.482 - - - - - 0.722 0.760 - - si:dkey-20i20.8 [Source:ZFIN;Acc:ZDB-GENE-060503-59]
18. TCF24 ENSDARG00000086944 518 1.459 - - - - - - - 0.712 0.747 transcription factor 24 [Source:HGNC Symbol;Acc:HGNC:32275]
19. cpne5a ENSDARG00000061466, ENSDARG00000111461 105 1.452 - - - - 0.729 - 0.723 - - copine Va [Source:ZFIN;Acc:ZDB-GENE-081105-9]
20. atoh7 ENSDARG00000069552 254 1.439 - - - - - - - 0.706 0.733 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
21. CR631122.1 ENSDARG00000044534 8 1 - - - - - 1.000 - - - protein RD3-like [Source:NCBI gene;Acc:100149591]
22. CR762480.5 CR762480.5 1 1 - - - - - - 1.000 - -
23. BX537305.1 ENSDARG00000113834 10 1 - - - - - - 1.000 - -
24. zgc:172133 ENSDARG00000075248 6 1 - - - - - - 1.000 - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
25. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
26. TMEM138 ENSDARG00000090543 105 1 - - - - - - 1.000 - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
27. CU694952.2 CU694952.2 3 1 - - - - - 1.000 - - -
28. b3gat3 ENSDARG00000001939 58 1 - - - - - - 1.000 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
29. GPR20 ENSDARG00000077427 1 1 - - - - - 1.000 - - - G protein-coupled receptor 20 [Source:ZFIN;Acc:ZDB-GENE-140106-136]
30. si:ch211-190k17.13 si:ch211-190k17.13 48 1 - - - - - - 1.000 - -
31. trpm3 ENSDARG00000039181 2 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
32. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
33. pdca ENSDARG00000011886 1 1 - - - - - 1.000 - - - phosducin a [Source:ZFIN;Acc:ZDB-GENE-031023-1]
34. pigr ENSDARG00000101890 10 1 - - - - - - 1.000 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
35. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - 1.000 - - -
36. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
37. PCDH10 PCDH10 7 1 - - - - - - 1.000 - -
38. zgc:194275 ENSDARG00000074014 130 1 - - - - - 1.000 - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
39. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
40. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1 - - - - - - 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
41. satb2 ENSDARG00000061885 6 1 - - - - - - 1.000 - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
42. C25H12orf29 C25H12orf29 31 1 - - - - - - 1.000 - -
43. CABZ01016604.1 CABZ01016604.1 12 1 - - - - - 1.000 - - -
44. f8 ENSDARG00000101385 1 1 - - - - - 1.000 - - - coagulation factor VIII, procoagulant component [Source:ZFIN;Acc:ZDB-GENE-090629-2]
45. si:ch73-248e21.5 ENSDARG00000088283 19 1 - - - - - - 1.000 - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
46. irgq2 ENSDARG00000068657 4 1 - - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
47. pdcb ENSDARG00000017634 10 1 - - - - - - 1.000 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
48. si:dkey-122c11.1 ENSDARG00000093747 19 1 - - - - - - 1.000 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
49. gata4 ENSDARG00000098952 11 1 - - - - - - 1.000 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
50. srd5a3 ENSDARG00000043307 142 1 - - - - - 1.000 - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
51. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - - 1.000 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
52. CYP27A1_2 CYP27A1_2 5 1 - - - - - - 1.000 - -
53. cx41.8 cx41.8 7 1 - - - - - 1.000 - - -
54. CABZ01049362.1 ENSDARG00000099508 570 1 - - - - - 1.000 - - -
55. mmrn2a ENSDARG00000076135 37 1 - - - - - - 1.000 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
56. fut7 ENSDARG00000044775 25 1 - - - - - 1.000 - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
57. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - - - - 1.000 - - -
58. ZNF608 3 1 - - - - - 1.000 - - - zinc finger protein 608, transcript variant X2
59. CLNK 8 1 - - - - - - 1.000 - - cytokine dependent hematopoietic cell linker
60. prlrb ENSDARG00000045955 12 1 - - - - - 1.000 - - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
61. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - 1.000 - - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
62. FAM177B 9 1 - - - - - - 1.000 - - family with sequence similarity 177 member B
63. BX901974.1 ENSDARG00000067592 2 1 - - - - - - 1.000 - -
64. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1 - - - - - 1.000 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
65. si:ch211-233h19.2 ENSDARG00000042213 47 1 - - - - - - 1.000 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
66. zp2.5 ENSDARG00000086522 15 1 - - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
67. top3b ENSDARG00000027586 8 1 - - - - - - 1.000 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
68. g6pcb ENSDARG00000014967 8 1 - - - - - - 1.000 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
69. CU929052.1 CU929052.1 642 1 - - - - - - 1.000 - -
70. CR387932.1 ENSDARG00000097344 2 1 - - - - - - 1.000 - -
71. GPR78 GPR78 17 1 - - - - - 1.000 - - -
72. hsd3b1 ENSDARG00000069926 35 1 - - - - - 1.000 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
73. EBF3 EBF3 16 1 - - - - - 1.000 - - -
74. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1 - - - - - - 1.000 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
75. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - - - - - - 1.000 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
76. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - - 1.000 - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
77. ppp2r3a ENSDARG00000077722 7 1 - - - - - - 1.000 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
78. ubr1 ENSDARG00000060480 71 1 - - - - - - 1.000 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
79. mtus2 mtus2 22 1 - - - - - - 1.000 - -
80. U1_35 U1_35 1 1 - - - - - - 1.000 - -
81. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - - 1.000 - - -
82. grk7b ENSDARG00000055534 17 1 - - - - - - 1.000 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
83. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1 - - - - - - 1.000 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
84. si:busm1-160c18.1 si:busm1-160c18.1 1 1 - - - - - 1.000 - - -
85. tbx5b ENSDARG00000092060 37 1 - - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
86. ipp ENSDARG00000075339 3 1 - - - - - 1.000 - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
87. zgc:152977 ENSDARG00000077178 59 1 - - - - - - 1.000 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
88. FNDC3B FNDC3B 2 1 - - - - - 1.000 - - -
89. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - - 1.000 - - -
90. eif4e1b ENSDARG00000014565 12 1 - - - - - 1.000 - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
91. CELA1 CELA1 14 1 - - - - - - 1.000 - -
92. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - 1.000 - - -
93. rprmb ENSDARG00000024006 120 1 - - - - - 1.000 - - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
94. U1_38 U1_38 1 1 - - - - - - 1.000 - -
95. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
96. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
97. avpr2aa ENSDARG00000007436 43 1 - - - - - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
98. BX511021.2 ENSDARG00000097646 5 1 - - - - - - 1.000 - -
99. Metazoa_SRP_13 Metazoa_SRP_13 7 1 - - - - - 1.000 - - -
100. TAPBP TAPBP 1 1 - - - - - 1.000 - - -

There are 649 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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