Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for irx4a

Gene Name Gene ID Reads Annotation
irx4a ENSDARG00000035648 71 iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]










Genes with expression patterns similar to irx4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irx4a ENSDARG00000035648 71 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
2. CABZ01081747.2 CABZ01081747.2 9 1.925 - - - - - 1.000 0.925 - -
3. crfb16 ENSDARG00000075181 40 1.777 - - - - 0.777 1.000 - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
4. si:ch73-189n23.1 ENSDARG00000086247 15 1.747 - - 0.747 - - - 1.000 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
5. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1.734 - - 0.734 - - 1.000 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
6. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1.715 - - - - - 1.000 - - 0.715 solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
7. BX510934.1 ENSDARG00000087544 140 1.702 - - - - - 0.759 0.943 - -
8. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1.688 - - - - - 0.819 0.869 - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
9. samd7 ENSDARG00000060354 15 1.63 - - - - - - - 0.806 0.824 sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]
10. ocstamp ENSDARG00000022139, ENSDARG00000114094 12 1.594 - - 0.704 - - - 0.890 - - osteoclast stimulatory transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050327-65]
11. fam19a4b ENSDARG00000062471 3 1.587 - - - - - - - 0.720 0.867 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4b [Source:ZFIN;Acc:ZDB-GENE-061013-164]
12. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.582 - - - - - - - 0.706 0.876 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
13. nkx2.1a nkx2.1a 156 1.545 - - - - - - - 0.760 0.785
14. ptf1a ENSDARG00000014479 349 1.543 - - - - - - - 0.715 0.828 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
15. npb ENSDARG00000078828 230 1.52 - - - - - - 0.801 - 0.719 neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
16. Metazoa_SRP_20 Metazoa_SRP_20 2 1.484 - - 0.747 - - 0.737 - - -
17. si:dkey-20i20.8 ENSDARG00000071714, ENSDARG00000094343 41 1.482 - - - - - 0.722 0.760 - - si:dkey-20i20.8 [Source:ZFIN;Acc:ZDB-GENE-060503-59]
18. TCF24 ENSDARG00000086944 518 1.459 - - - - - - - 0.712 0.747 transcription factor 24 [Source:HGNC Symbol;Acc:HGNC:32275]
19. cpne5a ENSDARG00000061466, ENSDARG00000111461 105 1.452 - - - - 0.729 - 0.723 - - copine Va [Source:ZFIN;Acc:ZDB-GENE-081105-9]
20. atoh7 ENSDARG00000069552 254 1.439 - - - - - - - 0.706 0.733 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
21. zgc:195633_2 34 1 - - - - - 1.000 - - - zgc:195633
22. soul5l ENSDARG00000089879 20 1 - - - - - 1.000 - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
23. CR387932.1 ENSDARG00000097344 2 1 - - - - - - 1.000 - -
24. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - 1.000 - - -
25. Metazoa_SRP_13 Metazoa_SRP_13 7 1 - - - - - 1.000 - - -
26. CU457819.3 ENSDARG00000105418 23 1 - - - - - 1.000 - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
27. ubr1 ENSDARG00000060480 71 1 - - - - - - 1.000 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
28. GPR78 GPR78 17 1 - - - - - 1.000 - - -
29. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - 1.000 - - -
30. mmrn2a ENSDARG00000076135 37 1 - - - - - - 1.000 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
31. EBF3 EBF3 16 1 - - - - - 1.000 - - -
32. sh2d1aa ENSDARG00000095348 4 1 - - - - - - 1.000 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
33. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - - 1.000 - - -
34. tbx5b ENSDARG00000092060 37 1 - - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
35. gphb5 ENSDARG00000027472 8 1 - - - - - 1.000 - - - glycoprotein hormone beta 5 [Source:ZFIN;Acc:ZDB-GENE-090319-4]
36. crhb ENSDARG00000027657 9 1 - - - - - 1.000 - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
37. dctn1a ENSDARG00000019743 45 1 - - - - - - 1.000 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
38. ccdc170 ENSDARG00000016161 18 1 - - - - - 1.000 - - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
39. foxl2 61 1 - - - - - 1.000 - - - forkhead box L2, transcript variant X1
40. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - - - 1.000 - -
41. si:ch211-233m11.3 si:ch211-233m11.3 1 1 - - - - - - 1.000 - -
42. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
43. BX927349.1 ENSDARG00000097041 1 1 - - - - - 1.000 - - - si:dkey-84k15.7 [Source:NCBI gene;Acc:103909075]
44. C7H10orf112 C7H10orf112 15 1 - - - - - 1.000 - - -
45. irgq2 ENSDARG00000068657 4 1 - - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
46. si:ch73-248e21.5 ENSDARG00000088283 19 1 - - - - - - 1.000 - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
47. si:busm1-160c18.1 si:busm1-160c18.1 1 1 - - - - - 1.000 - - -
48. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - - - - 1.000 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
49. pxn pxn 10 1 - - - - - - 1.000 - -
50. cart1 ENSDARG00000070930 46 1 - - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
51. si:dkey-47k20.6 si:dkey-47k20.6 2 1 - - - - - - 1.000 - -
52. sema4aa ENSDARG00000077103 4 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Aa [Source:ZFIN;Acc:ZDB-GENE-110411-86]
53. U8_1 U8_1 2 1 - - - - - 1.000 - - -
54. urgcp ENSDARG00000036767 6 1 - - - - - - 1.000 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
55. agt ENSDARG00000016412 17 1 - - - - - 1.000 - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
56. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - - - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
57. top3b ENSDARG00000027586 8 1 - - - - - - 1.000 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
58. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1 - - - - - - 1.000 - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
59. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - - - - - 1.000 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
60. si:ch73-77n15.1 si:ch73-77n15.1 2 1 - - - - - - 1.000 - -
61. SEMA6B SEMA6B 35 1 - - - - - - 1.000 - -
62. CU855711.1 ENSDARG00000088643 6 1 - - - - - - 1.000 - - legumain-like [Source:NCBI gene;Acc:108191752]
63. si:ch211-218m3.16 ENSDARG00000044336 33 1 - - - - - - 1.000 - - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
64. gabrr2b ENSDARG00000014057 9 1 - - - - - - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
65. si:dkey-208k4.7 si:dkey-208k4.7 14 1 - - - - - 1.000 - - -
66. IYD IYD 8 1 - - - - - - 1.000 - -
67. CR631122.1 ENSDARG00000044534 8 1 - - - - - 1.000 - - - protein RD3-like [Source:NCBI gene;Acc:100149591]
68. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - - - - - - 1.000 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
69. GPR20 ENSDARG00000077427 1 1 - - - - - 1.000 - - - G protein-coupled receptor 20 [Source:ZFIN;Acc:ZDB-GENE-140106-136]
70. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1 - - - - - - 1.000 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
71. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - - 1.000 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
72. zgc:172053 ENSDARG00000038321 9 1 - - - - - 1.000 - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
73. BX120005.1 ENSDARG00000089327 1 1 - - - - - 1.000 - - - cytotoxic and regulatory T-cell molecule [Source:NCBI gene;Acc:101884219]
74. wnt3a ENSDARG00000058822 5 1 - - - - - - 1.000 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
75. GALNTL6 ENSDARG00000040048 33 1 - - - - - - 1.000 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
76. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - 1.000 - - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
77. FAM177B 9 1 - - - - - - 1.000 - - family with sequence similarity 177 member B
78. PLEKHS1_2 PLEKHS1_2 21 1 - - - - - - 1.000 - -
79. fut7 ENSDARG00000044775 25 1 - - - - - 1.000 - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
80. ZNF70_9 ZNF70_9 1 1 - - - - - 1.000 - - -
81. MMP20 MMP20 1 1 - - - - - - 1.000 - -
82. si:ch211-121k24.1 si:ch211-121k24.1 1 1 - - - - - 1.000 - - -
83. cnga4 ENSDARG00000069383 6 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070912-292]
84. lratb 3 1 - - - - - - 1.000 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
85. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - 1.000 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
86. CU672227.1 ENSDARG00000105807 15 1 - - - - - - 1.000 - -
87. CU062628.1 ENSDARG00000090267 3 1 - - - - - 1.000 - - - trypsin-2-like [Source:NCBI gene;Acc:103908930]
88. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - - 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
89. smad6b ENSDARG00000031763 12 1 - - - - - - 1.000 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
90. BX119910.9 BX119910.9 7 1 - - - - - 1.000 - - -
91. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
92. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1 - - - - - - 1.000 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
93. CABZ01057928.1 ENSDARG00000115082 1 1 - - - - - 1.000 - - - protein diaphanous homolog 1-like [Source:NCBI gene;Acc:101882228]
94. fam19a1 7 1 - - - - - 1.000 - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
95. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
96. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
97. gdf6b ENSDARG00000005510 106 1 - - - - - 1.000 - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
98. zp2.5 ENSDARG00000086522 15 1 - - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
99. CU104716.2 CU104716.2 10 1 - - - - - - 1.000 - -
100. wdr21 ENSDARG00000003197, ENSDARG00000110654 4 1 - - - - - 1.000 - - - WD repeat domain 21 [Source:ZFIN;Acc:ZDB-GENE-040109-2]

There are 649 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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