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Results for irx3b

Gene Name Gene ID Reads Annotation
irx3b ENSDARG00000031138 2538 iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]










Genes with expression patterns similar to irx3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irx3b ENSDARG00000031138 2538 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
2. wu:fb17g07 wu:fb17g07 10567 3.296 - 0.955 - - - 0.725 0.896 - 0.720
3. tmsb ENSDARG00000054911 6411 2.284 - 0.718 - - - 0.810 0.756 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
4. CABZ01072954.1 CABZ01072954.1 2330 2.273 - 0.715 - - - 0.796 0.762 - -
5. ttll7 ENSDARG00000062973 519 2.268 - 0.786 - - - 0.767 0.715 - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
6. si:dkey-25e11.10 si:dkey-25e11.10 955 2.266 - 0.732 - - - 0.786 0.748 - -
7. pcdh1gc5 ENSDARG00000104826 10052 2.245 - 0.807 - - - 0.732 0.706 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
8. BX957337.1 BX957337.1 1685 2.233 - 0.777 - - - 0.746 0.710 - -
9. r3hcc1l ENSDARG00000089243 1254 2.228 - 0.772 - - - 0.714 0.742 - - R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]
10. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 2.227 - 0.717 - - - 0.788 0.722 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
11. hoxc4a ENSDARG00000070338 1382 2.218 - 0.728 - - - 0.743 0.747 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
12. srpk1b ENSDARG00000031560 2079 2.218 - 0.755 - - - 0.760 0.703 - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
13. stxbp1a ENSDARG00000001994 5154 2.207 - 0.768 - - - 0.727 0.712 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
14. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.199 - 0.718 - - - 0.767 0.714 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
15. cadm3 ENSDARG00000057013 1545 2.193 - 0.740 - - - 0.711 0.742 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
16. rad21a ENSDARG00000006092 393 2.172 0.709 - - 0.709 - 0.754 - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
17. dixdc1a ENSDARG00000025302 716 2.166 - 0.732 - - - 0.713 0.721 - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
18. pcsk1nl ENSDARG00000076170 1232 2.164 - 0.753 - - - 0.705 0.706 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
19. cers6 ENSDARG00000053583 247 2.148 - 0.706 - - - 0.737 0.705 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
20. lbx2 ENSDARG00000025131 1388 1.742 0.856 - - - - - 0.886 - - ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2]
21. atp1b2a ENSDARG00000099203 4010 1.7 - 0.922 - - - - 0.778 - - ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
22. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.685 - - - - - 0.848 0.837 - - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
23. npm1b ENSDARG00000037675 5448 1.66 - - - - - 0.792 0.868 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
24. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 1.624 - - - - - 0.805 0.819 - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
25. CCDC181 ENSDARG00000062021 77 1.622 - 0.810 - - - - 0.812 - - coiled-coil domain containing 181 [Source:ZFIN;Acc:ZDB-GENE-060503-312]
26. wu:fq41a10 wu:fq41a10 7009 1.622 - 0.801 - - - - 0.821 - -
27. tcf7l1b ENSDARG00000007369 2785 1.616 - - - - - 0.803 0.813 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
28. wu:fb30e12 wu:fb30e12 1254 1.613 - - - - - 0.757 0.856 - -
29. BX511021.1 ENSDARG00000073936 647 1.609 - 0.802 - - - - - 0.807 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
30. cdh7 582 1.607 - 0.857 - - - - 0.750 - - cadherin 7, type 2, transcript variant X1
31. brd7 ENSDARG00000008380 3654 1.604 - 0.850 - - - - 0.754 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
32. napg napg 645 1.603 - - - - - 0.734 0.869 - -
33. RBM6 ENSDARG00000077060 3521 1.601 - - - - - 0.838 - - 0.763 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
34. endog ENSDARG00000058865 679 1.6 - - - - - 0.821 - 0.779 - endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
35. hoxb6a ENSDARG00000010630 1106 1.6 0.896 - - - - 0.704 - - - homeobox B6a [Source:ZFIN;Acc:ZDB-GENE-990415-106]
36. hdgfrp2 7462 1.599 - 0.794 - - - 0.805 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
37. tox ENSDARG00000032317 9126 1.597 - 0.866 - - - - 0.731 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
38. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.595 - - - - - 0.770 0.825 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
39. skib ENSDARG00000008034 6518 1.593 - 0.812 - - - - 0.781 - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
40. ubtf ENSDARG00000035066 4070 1.589 - - - - - 0.792 - 0.797 - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
41. ppp1r14c ENSDARG00000077341 1587 1.588 - 0.732 - - - 0.856 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
42. apex1 ENSDARG00000045843 6345 1.587 - - - - - 0.736 0.851 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
43. nfyba ENSDARG00000039185 1804 1.583 - - - - - 0.716 0.867 - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
44. ildr2 ENSDARG00000014180 791 1.581 - - - - - 0.755 0.826 - - immunoglobulin-like domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050706-83]
45. IPP ENSDARG00000075339 194 1.581 - - - - - - 0.816 0.765 - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
46. CBFA2T3 ENSDARG00000079012 6799 1.574 - 0.779 - - - - 0.795 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
47. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.573 - 0.735 - - - 0.838 - - - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
48. tnika ENSDARG00000056218 728 1.572 - 0.807 - - - 0.765 - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
49. sumo3a ENSDARG00000028119 13447 1.57 - - - - - 0.782 0.788 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
50. spock2 ENSDARG00000075393 791 1.569 - - - - - 0.787 0.782 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
51. setd1a ENSDARG00000060030 874 1.569 0.764 - - - - 0.805 - - - SET domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-080521-4]
52. hoxb7a ENSDARG00000056030 1212 1.568 - 0.804 - - - 0.764 - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
53. mir34 176 1.568 - - - - - 0.778 0.790 - - microRNA 34
54. hsp90aa1.2 ENSDARG00000024746 5210 1.567 - - - - - 0.735 0.832 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]
55. pax3a ENSDARG00000010192 626 1.565 - - - - - 0.793 0.772 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
56. hcfc1b ENSDARG00000012519 3633 1.565 - - - - - 0.750 0.815 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
57. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.564 - 0.809 - - - - - 0.755 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
58. slc44a5b ENSDARG00000057419 534 1.562 - - - - - - 0.810 0.752 - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
59. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.56 - - - - - 0.735 0.825 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
60. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.56 - - - - - 0.749 0.811 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
61. gipc1 ENSDARG00000104483 2913 1.56 - 0.703 - - - 0.857 - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
62. CR626962.1 ENSDARG00000096981 220 1.56 - - - - - 0.831 0.729 - -
63. ptpdc1 ptpdc1 281 1.558 0.785 - - - - - - 0.773 -
64. ash2l ENSDARG00000060392 4916 1.557 - - - - - 0.827 0.730 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
65. lpl ENSDARG00000087697 2578 1.554 - 0.709 - - - 0.845 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
66. nkain1 ENSDARG00000006859 1961 1.553 - - - - - 0.703 0.850 - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
67. sept9b ENSDARG00000103900, ENSDARG00000113442 1495 1.551 - 0.776 - - - 0.775 - - - septin 9b [Source:ZFIN;Acc:ZDB-GENE-050327-17]
68. srcap ENSDARG00000005236 1740 1.549 - - - - - 0.790 0.759 - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
69. prmt1 ENSDARG00000010246 11311 1.548 - 0.833 - - - 0.715 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
70. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.548 - 0.739 - - - - 0.809 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
71. rbms3 ENSDARG00000044574 2514 1.548 - - - - - 0.714 0.834 - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
72. cd99l2 ENSDARG00000056722 5036 1.547 - - - - - 0.819 0.728 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
73. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 1.546 - - - - - 0.734 0.812 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
74. LINGO2 LINGO2 300 1.544 - - - - - 0.711 0.833 - -
75. myod1 ENSDARG00000030110 6019 1.543 - 0.802 - - - 0.741 - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
76. mir10d-1 mir10d-1 860 1.541 - 0.773 - - - - 0.768 - -
77. slc1a3a ENSDARG00000104431 9888 1.541 - 0.811 - - - 0.730 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
78. C24H17orf96 C24H17orf96 1538 1.539 - 0.773 - - - - 0.766 - -
79. dpysl3 ENSDARG00000002587 4381 1.538 - 0.783 - - - - 0.755 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
80. SLC5A7 SLC5A7 453 1.538 - 0.823 - - - - 0.715 - -
81. mapta ENSDARG00000089314 2038 1.537 - 0.800 - - - 0.737 - - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
82. rcor2 ENSDARG00000008278 1678 1.535 0.754 - - - - 0.781 - - - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
83. meis2b ENSDARG00000077840 5166 1.534 - 0.735 - - - - 0.799 - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
84. stox2a ENSDARG00000070162 1620 1.533 - - - - - 0.752 0.781 - - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
85. CEP192 CEP192 978 1.533 - - - - - 0.770 0.763 - -
86. mta2 ENSDARG00000013031 2932 1.532 - 0.721 - - - - 0.811 - - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
87. znf292b ENSDARG00000043973 3791 1.531 - - - - - - 0.799 - 0.732 zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
88. aldocb ENSDARG00000019702 2111 1.53 - - - - - 0.759 0.771 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
89. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.529 - 0.811 - - - 0.718 - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
90. SNAP91 ENSDARG00000098809 556 1.528 - 0.811 - - - - 0.717 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
91. nadl1.1 1200 1.528 - 0.822 - - - - 0.706 - - neural adhesion molecule L1.1, transcript variant X1
92. nxf1 ENSDARG00000055076 3251 1.528 - - - - - 0.799 0.729 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
93. tcf12 ENSDARG00000004714 7606 1.526 0.757 - - - - - - - 0.769 transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040516-11]
94. coe2 coe2 1633 1.525 - - - - - 0.776 0.749 - -
95. gas1b ENSDARG00000067984 1748 1.524 - - - - - 0.723 0.801 - - growth arrest-specific 1b [Source:ZFIN;Acc:ZDB-GENE-050302-79]
96. ptbp2b ENSDARG00000015901 2458 1.523 - - - - - 0.720 0.803 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
97. fen1 ENSDARG00000011404 3358 1.522 - 0.725 - - - - 0.797 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
98. tmem57b 871 1.521 0.815 - - - - 0.706 - - - transmembrane protein 57b, transcript variant X2
99. mapk12b ENSDARG00000006409 2246 1.52 - 0.779 - - - 0.741 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
100. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.52 - - - - - 0.743 0.777 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]

There are 2135 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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