Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for irgf3

Gene Name Gene ID Reads Annotation
irgf3 ENSDARG00000062820 20 immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]










Genes with expression patterns similar to irgf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irgf3 ENSDARG00000062820 20 7 - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
2. myo7aa ENSDARG00000099871 23 2.668 - 0.856 - - - - 0.881 - 0.931 myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
3. gucy2f ENSDARG00000025504 6 2.544 - - - - 0.807 0.856 0.881 - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
4. BX682234.1 ENSDARG00000074732 5 1.972 - - - 0.972 1.000 - - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
5. AL929220.1 ENSDARG00000103323 14 1.881 - - - 1.000 - - 0.881 - -
6. C7H19orf12_1 C7H19orf12_1 20 1.873 - - - 0.873 - 1.000 - - -
7. CU929145.3 ENSDARG00000097274 3 1.8 - - - 0.800 - - - - 1.000
8. CR942805.3 CR942805.3 7 1.777 - - 0.896 - - - 0.881 - -
9. EMB ENSDARG00000059485 35 1.763 - - - - - 0.763 1.000 - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
10. si:dkey-122c11.7 ENSDARG00000103721 3 1.75 - - - - 0.869 - 0.881 - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
11. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 1.745 - - - 0.922 - - - - 0.823 zgc:112234 [Source:NCBI gene;Acc:554097]
12. ctssa ctssa 24 1.745 - - - - - 0.856 0.889 - -
13. CU570791.1 ENSDARG00000098597 4 1.741 - - 0.860 - - - 0.881 - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
14. clrn1 ENSDARG00000102890 5 1.737 - - - - - 0.856 0.881 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
15. grifin ENSDARG00000033382 141 1.737 - - - - - 0.856 0.881 - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
16. si:ch211-73m21.1 ENSDARG00000096491 10 1.737 - - - - - 0.856 0.881 - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
17. fgf20b ENSDARG00000086070 13 1.726 - - 0.870 - - 0.856 - - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
18. fndc7 fndc7 3 1.725 - - - - 0.869 0.856 - - -
19. cabp2a ENSDARG00000052016 19 1.725 - - - - 0.869 0.856 - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
20. si:dkey-15h8.1 si:dkey-15h8.1 17 1.724 - - - - - 0.856 - - 0.868
21. gcgb ENSDARG00000040907 182 1.718 - - - 0.859 0.859 - - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
22. STK31 ENSDARG00000056339 37 1.707 - - - - - 0.856 - - 0.851 serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
23. glulc ENSDARG00000013227 6 1.705 - - - - 0.849 0.856 - - - glutamate-ammonia ligase (glutamine synthase) c [Source:ZFIN;Acc:ZDB-GENE-060929-540]
24. spp1 ENSDARG00000044276 34 1.704 - - - - - 1.000 0.704 - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
25. plek ENSDARG00000104325 21 1.687 - - - 0.909 - 0.778 - - - pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506]
26. notchl ENSDARG00000088308 28 1.674 - - - 0.965 - - 0.709 - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
27. slc9a3.1 ENSDARG00000058498 46 1.667 - 0.807 - - - - 0.860 - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
28. ins ENSDARG00000035350, ENSDARG00000116735 317 1.645 - - - 0.822 0.823 - - - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
29. mfsd4b ENSDARG00000079571 556 1.64 - - - - - 0.889 0.751 - - major facilitator superfamily domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-070410-26]
30. si:dkey-211g8.6 ENSDARG00000063088 19 1.629 - - - - - 0.748 0.881 - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
31. RGS14 RGS14 15 1.628 - 0.747 - - - - 0.881 - -
32. rassf10a 417 1.625 - 0.921 - - - - 0.704 - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
33. zgc:172014 ENSDARG00000101775 3 1.612 - - 0.731 - - - 0.881 - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
34. si:dkey-3b8.4 si:dkey-3b8.4 13 1.611 - - - 0.730 - - 0.881 - -
35. CR626874.1 ENSDARG00000100141 55 1.607 - - - 0.726 - - 0.881 - -
36. si:ch211-229d2.5 ENSDARG00000079119 95 1.602 - - - - 0.869 0.733 - - - si:ch211-229d2.5 [Source:ZFIN;Acc:ZDB-GENE-121214-200]
37. zgc:153151 ENSDARG00000069563 126 1.596 - 0.829 - 0.767 - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
38. zgc:136902 zgc:136902 4 1.582 - - 0.701 - - - 0.881 - -
39. CABZ01081748.1 ENSDARG00000102139 31 1.582 - - - - - 0.856 0.726 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
40. OCEL1 OCEL1 27 1.567 - 0.711 - - - 0.856 - - -
41. def6a ENSDARG00000012247 20 1.539 - - - 0.710 - - - - 0.829 differentially expressed in FDCP 6a homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1246]
42. pdx1 ENSDARG00000002779, ENSDARG00000109275 28 1.517 - - - 0.736 0.781 - - - - pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]
43. gem ENSDARG00000029112 138 1.51 - 0.724 - - - - 0.786 - - GTP binding protein overexpressed in skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-060825-251]
44. C5H11orf88 C5H11orf88 280 1.509 - 0.771 - - - - 0.738 - -
45. cx32.3 ENSDARG00000041787 33 1.454 - 0.747 - - - 0.707 - - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
46. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 1.42 - 0.709 - - - 0.711 - - - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
47. kif13bb ENSDARG00000073859 7 1 - - - 1.000 - - - - - kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]
48. badb ENSDARG00000054937, ENSDARG00000114609 11 1 - - - - - - - - 1.000 BCL2 associated agonist of cell death b [Source:ZFIN;Acc:ZDB-GENE-000616-1]
49. AL935174.1 ENSDARG00000109674 18 1 - - - - - 1.000 - - -
50. FGD5_1 FGD5_1 8 1 - - - 1.000 - - - - -
51. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - 1.000 - - - - -
52. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1 - - - 1.000 - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
53. si:dkey-211a8.1 si:dkey-211a8.1 28 1 - - - - - 1.000 - - -
54. dnaaf2 ENSDARG00000103132 24 1 - - - - - - - - 1.000 dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
55. fgf14 ENSDARG00000040982 5 1 - - - 1.000 - - - - - fibroblast growth factor 14 [Source:ZFIN;Acc:ZDB-GENE-060506-1]
56. zgc:172139 ENSDARG00000068830 10 1 - - - 1.000 - - - - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
57. csf1ra ENSDARG00000102986 2 1 - - - - - - - - 1.000 colony stimulating factor 1 receptor, a [Source:ZFIN;Acc:ZDB-GENE-001205-1]
58. tmem8c 10 1 - - - 1.000 - - - - - transmembrane protein 8C, transcript variant X1
59. APOL4 APOL4 27 1 - - - - - - 1.000 - -
60. CABZ01064228.1 CABZ01064228.1 1 1 - - - 1.000 - - - - -
61. prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 1 - - - 1.000 - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
62. SLC15A5 ENSDARG00000089974 18 1 - - - 1.000 - - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
63. SLC28A2 SLC28A2 21 1 - - - - - 1.000 - - -
64. zgc:172120 ENSDARG00000069199 278 1 - - - - - - 1.000 - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
65. WIPI1 ENSDARG00000040657 138 1 - - - 1.000 - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
66. HRASLS ENSDARG00000100021 16 1 - - - 1.000 - - - - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
67. SMU1 SMU1 3 1 - - - - - - - - 1.000
68. fnbp1 fnbp1 5 1 - - - 1.000 - - - - -
69. CABZ01112027.1 CABZ01112027.1 2 1 - - - - - - - - 1.000
70. rnaset2l ENSDARG00000058413 17 1 - - - - - - 1.000 - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
71. SNORA23 SNORA23 1 1 - - - 1.000 - - - - -
72. si:dkey-287i17.5 si:dkey-287i17.5 5 1 - - - - - - 1.000 - -
73. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - - - 1.000 - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
74. si:dkey-106m10.5 si:dkey-106m10.5 10 1 - - - - - - 1.000 - -
75. CR381673.3 CR381673.3 4 1 - - - 1.000 - - - - -
76. nanog ENSDARG00000075113 10 1 - - - 1.000 - - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
77. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - - - - - - 1.000 - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
78. SLC2A11 SLC2A11 5 1 - - - 1.000 - - - - -
79. CR855273.1 CR855273.1 2 1 - - - - - - - - 1.000
80. LETMD1 ENSDARG00000030641, ENSDARG00000110586 13 1 - - - - - - - - 1.000 LETM1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080723-8]
81. cacnb2a ENSDARG00000099045 374 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
82. SPAG17 SPAG17 31 1 - - - 1.000 - - - - -
83. mettl22 ENSDARG00000077863 81 1 - - - - - 1.000 - - - methyltransferase like 22 [Source:ZFIN;Acc:ZDB-GENE-081022-70]
84. flnb ENSDARG00000092281 10 1 - - - - - 1.000 - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
85. zgc:174680 ENSDARG00000100702 3 1 - - - 1.000 - - - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
86. SLC26A3 SLC26A3 8 1 - - - 1.000 - - - - -
87. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 1 - - - 1.000 - - - - -
88. cenpv ENSDARG00000092285 10 1 - - - 1.000 - - - - - centromere protein V [Source:ZFIN;Acc:ZDB-GENE-060526-76]
89. TTC18 TTC18 58 1 - - - - - - 1.000 - -
90. eif2b5 ENSDARG00000074995 8 1 - - - 1.000 - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
91. zgc:114037_1 10 1 - - - - - - - - 1.000 zgc:114037
92. C25HXorf38_1 C25HXorf38_1 35 1 - - - - - - 1.000 - -
93. NAT14 ENSDARG00000115349 21 1 - - - - - - 1.000 - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
94. npy2r ENSDARG00000094763, ENSDARG00000112792 2 1 - - - - - - - - 1.000 neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
95. DYNLRB2 DYNLRB2 12 1 - - - - - - - - 1.000
96. si:ch73-346o4.2 si:ch73-346o4.2 1 1 - - - 1.000 - - - - -
97. wu:fb63c12 26 1 - - - 1.000 - - - - - wu:fb63c12
98. adat1 ENSDARG00000061348 62 1 - - - - - - 1.000 - - adenosine deaminase, tRNA-specific 1 [Source:ZFIN;Acc:ZDB-GENE-070410-64]
99. CR762436.1 ENSDARG00000112375 636 1 - - - - - 1.000 - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
100. BX569798.1 ENSDARG00000037619 3 1 - - - - - - - - 1.000 guanine nucleotide-binding protein subunit alpha-12-like [Source:NCBI gene;Acc:797518]

There are 1186 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA