Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for irf5

Gene Name Gene ID Reads Annotation
irf5 ENSDARG00000045681 2594 interferon regulatory factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2587]










Genes with expression patterns similar to irf5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irf5 ENSDARG00000045681 2594 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 interferon regulatory factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2587]
2. pip5k1bb ENSDARG00000006508 2812 1.739 - - 0.739 - - - - - 1.000 phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
3. dlgap1b ENSDARG00000037415 658 1.64 0.825 - - - - - 0.815 - - discs, large (Drosophila) homolog-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-091116-98]
4. itpk1 itpk1 425 1.613 - 0.746 - - - - 0.867 - -
5. hoxa13a ENSDARG00000100312 543 1.604 - 0.895 - - - - 0.709 - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
6. nudt9 ENSDARG00000087927 1148 1.595 - 0.798 - - - - 0.797 - - nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
7. dnmbp ENSDARG00000074121 2711 1.581 - 0.872 - - - - 0.709 - - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
8. SLC6A7 ENSDARG00000030006 304 1.562 - 0.784 - - - 0.778 - - - solute carrier family 6 member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-1492]
9. CR388015.1 CR388015.1 311 1.558 - 0.772 - - - 0.786 - - -
10. zgc:158868 ENSDARG00000069379, ENSDARG00000116578 121 1.55 - 0.746 - - - - 0.804 - - zgc:158868 [Source:ZFIN;Acc:ZDB-GENE-070112-892]
11. alox5 alox5 406 1.539 - 0.785 - - - - 0.754 - -
12. ponzr1 ENSDARG00000090444 540 1.539 - 0.800 - - - 0.739 - - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
13. cbx4 ENSDARG00000099441 372 1.514 - - - - - 0.708 0.806 - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
14. slc9a3.1 ENSDARG00000058498 46 1.506 0.734 0.772 - - - - - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
15. SUOX ENSDARG00000091574 122 1.47 - 0.760 - - - - 0.710 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
16. BX296557.2 BX296557.2 1083 1.467 - - - - - 0.748 0.719 - -
17. kcnh6 kcnh6 59 1.462 - 0.760 - - - - 0.702 - -
18. stxbp2 ENSDARG00000007603 1646 1.461 - 0.710 - - - - 0.751 - - syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
19. mboat2a ENSDARG00000031845 1255 1.441 - 0.722 - - - - 0.719 - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
20. hvcn1 ENSDARG00000040338 571 1.433 - 0.726 - - - 0.707 - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
21. trim62 ENSDARG00000060901 12 1.415 0.709 - - - - - 0.706 - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
22. osgn1 ENSDARG00000052279 5607 1 - - - - - - - - 1.000 oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
23. KLF16 KLF16 3773 1 - - - - - - - - 1.000
24. slc40a1 ENSDARG00000000241 4882 1 - - - - - - - - 1.000 solute carrier family 40 (iron-regulated transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-000511-8]
25. BX000999.2 BX000999.2 2353 1 - - - - - - - - 1.000
26. NDUFB2 ENSDARG00000045490 9141 1 - - - - - - - - 1.000 NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
27. DST ENSDARG00000101858 4395 1 - - - - - - - - 1.000 dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
28. lect1 7551 0.999 - - - - - - - - 0.999 leukocyte cell derived chemotaxin 1, transcript variant X1
29. vbp1 ENSDARG00000030241 10619 0.999 - - - - - - - - 0.999 von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
30. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 0.999 - - - - - - - - 0.999 one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
31. mapk6 ENSDARG00000032103 6422 0.999 - - - - - - - - 0.999 mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
32. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 0.998 - - - - - - - - 0.998 chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
33. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 0.998 - - - - - - - - 0.998 FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
34. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 0.998 - - - - - - - - 0.998 serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
35. ctnnb1 ENSDARG00000014571 12004 0.995 - - - - - - - - 0.995 catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
36. BX511252.1 BX511252.1 59309 0.993 - - - - - - - - 0.993
37. zgc:101000 zgc:101000 9041 0.992 - - - - - - - - 0.992
38. eif5a2 ENSDARG00000056186 43804 0.987 - - - - - - - - 0.987 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
39. rpl17 ENSDARG00000057556 60281 0.984 - - - - - - - - 0.984 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
40. ddx5 ENSDARG00000038068 35302 0.981 - - - - - - - - 0.981 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
41. ppib ENSDARG00000092798 21969 0.98 - - - - - - - - 0.980 peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
42. huwe1 ENSDARG00000016782 6493 0.969 - - - - - - - - 0.969 HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]
43. ep300b ENSDARG00000061108 5173 0.969 - - - - - - - - 0.969 E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
44. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 0.964 - - - - - - - - 0.964 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
45. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 0.961 - 0.961 - - - - - - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
46. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 0.952 - - - - - - - - 0.952 F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
47. sb:cb252 sb:cb252 2480 0.942 - 0.942 - - - - - - -
48. hbae1 14666 0.936 - - - - - - - - 0.936 hemoglobin, alpha embryonic 1
49. mctp2b ENSDARG00000073970 238 0.931 - 0.931 - - - - - - - multiple C2 domains, transmembrane 2b [Source:ZFIN;Acc:ZDB-GENE-050506-136]
50. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 0.926 - - - - - - - - 0.926 TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
51. si:dkey-39a18.1 ENSDARG00000045669 599 0.919 - 0.919 - - - - - - - si:dkey-39a18.1 [Source:ZFIN;Acc:ZDB-GENE-041210-127]
52. rps23 ENSDARG00000021838 145026 0.917 - - - - - - - - 0.917 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
53. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 0.916 - - - - - - - - 0.916 prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
54. DDHD1 DDHD1 250 0.915 - 0.915 - - - - - - -
55. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 0.915 - - - - - - - - 0.915 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
56. DAPK2 DAPK2 283 0.914 - - - - - - 0.914 - -
57. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 0.913 - 0.913 - - - - - - - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
58. zgc:64085 zgc:64085 955 0.913 - 0.913 - - - - - - -
59. cldnh ENSDARG00000069503 2410 0.911 - 0.911 - - - - - - - claudin h [Source:ZFIN;Acc:ZDB-GENE-010328-8]
60. zgc:114037 63 0.905 - 0.905 - - - - - - - zgc:114037
61. ef1 1343 0.904 - 0.904 - - - - - - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
62. si:ch211-243g18.2 ENSDARG00000044261 4483 0.902 - 0.902 - - - - - - - si:ch211-243g18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2830]
63. chia.6 ENSDARG00000093193, ENSDARG00000116259 25 0.902 - 0.902 - - - - - - - chitinase, acidic.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1140]
64. AKAP13_1 ENSDARG00000079994 444 0.901 - 0.901 - - - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
65. spata6l ENSDARG00000004874 149 0.898 - 0.898 - - - - - - - spermatogenesis associated 6-like [Source:ZFIN;Acc:ZDB-GENE-040426-1369]
66. pip5k1ca ENSDARG00000076001 53 0.895 - 0.895 - - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a [Source:ZFIN;Acc:ZDB-GENE-050208-358]
67. vps9d1 ENSDARG00000019195 582 0.893 - - - - - - 0.893 - - VPS9 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050306-57]
68. ddx59 ENSDARG00000022177, ENSDARG00000114618 205 0.885 - 0.885 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Source:ZFIN;Acc:ZDB-GENE-050208-665]
69. atp1a1a.3 ENSDARG00000039131 3267 0.884 - 0.884 - - - - - - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-001212-3]
70. ACSL1 ACSL1 240 0.884 - 0.884 - - - - - - -
71. rps6ka3b ENSDARG00000057927, ENSDARG00000109970 812 0.883 - - - - - - 0.883 - - ribosomal protein S6 kinase, polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-070209-74]
72. tmprss2 ENSDARG00000098686 251 0.883 - 0.883 - - - - - - - transmembrane serine protease 2 [Source:ZFIN;Acc:ZDB-GENE-041212-48]
73. osbpl10 osbpl10 836 0.879 - - - - - - 0.879 - -
74. MFAP4_2 MFAP4_2 592 0.878 - - - - - - 0.878 - -
75. bmp4 ENSDARG00000019995 2038 0.878 - 0.878 - - - - - - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
76. zwilch ENSDARG00000057100 408 0.877 - - - - - - 0.877 - - zwilch kinetochore protein [Source:ZFIN;Acc:ZDB-GENE-050420-101]
77. tmem179 ENSDARG00000013292 343 0.876 0.876 - - - - - - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
78. osr2 ENSDARG00000038006 360 0.875 - - - - - - 0.875 - - odd-skipped related transciption factor 2 [Source:ZFIN;Acc:ZDB-GENE-050417-183]
79. MKL2 MKL2 580 0.874 0.874 - - - - - - - -
80. rorcb ENSDARG00000017780 233 0.866 - - - - - - 0.866 - - RAR-related orphan receptor C b [Source:ZFIN;Acc:ZDB-GENE-040724-215]
81. usp11 ENSDARG00000076303 183 0.865 0.865 - - - - - - - - ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421]
82. zgc:112484 zgc:112484 780 0.865 - - - - - - 0.865 - -
83. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 0.865 - 0.865 - - - - - - - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
84. irg1l ENSDARG00000062788 503 0.864 - 0.864 - - - - - - - immunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
85. map2k1 ENSDARG00000007825 373 0.864 - - - - - - 0.864 - - mitogen-activated protein kinase kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2759]
86. emx1 ENSDARG00000039569 787 0.863 - 0.863 - - - - - - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
87. esrrb ENSDARG00000100847 636 0.863 - 0.863 - - - - - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
88. CDC42EP1_1 CDC42EP1_1 449 0.861 - 0.861 - - - - - - -
89. ap1s3b ENSDARG00000027966 1064 0.86 - 0.860 - - - - - - - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
90. ebp ENSDARG00000046098 502 0.859 - 0.859 - - - - - - - EBP, cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]
91. magt1 ENSDARG00000058062 3903 0.857 - - - - - - 0.857 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
92. rps14 ENSDARG00000036629 125331 0.851 - - - - - - - - 0.851 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
93. anxa5b ENSDARG00000016470 2934 0.847 - 0.847 - - - - - - - annexin A5b [Source:ZFIN;Acc:ZDB-GENE-030131-9076]
94. st3gal3b ENSDARG00000015252 465 0.847 - 0.847 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-050411-13]
95. kctd12.2 ENSDARG00000053542, ENSDARG00000113200 2951 0.843 - - - - - - 0.843 - - potassium channel tetramerisation domain containing 12.2 [Source:ZFIN;Acc:ZDB-GENE-060117-4]
96. fgfr1op ENSDARG00000003058 449 0.842 - - - - - - 0.842 - - FGFR1 oncogene partner [Source:ZFIN;Acc:ZDB-GENE-090417-1]
97. tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 0.841 - - - - - - 0.841 - - TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]
98. elf3 ENSDARG00000077982 211 0.841 - 0.841 - - - - - - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
99. tpst1l ENSDARG00000044513 1339 0.841 - 0.841 - - - - - - - tyrosylprotein sulfotransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040316-1]
100. plcd3a ENSDARG00000052957 467 0.84 - 0.840 - - - - - - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]

There are 763 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA