Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for irf3

Gene Name Gene ID Reads Annotation
irf3 ENSDARG00000076251 8 interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]










Genes with expression patterns similar to irf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irf3 ENSDARG00000076251 8 6 - 1.000 1.000 1.000 1.000 - 1.000 1.000 - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
2. si:ch211-207c6.6 si:ch211-207c6.6 32 2.537 - - 1.000 - 0.816 - 0.721 - -
3. C24H16orf11 C24H16orf11 32 1.964 - 0.964 1.000 - - - - - -
4. mxa ENSDARG00000021688 14 1.958 - - - - 0.958 - 1.000 - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
5. si:ch211-67f13.8 ENSDARG00000079155 7 1.898 - 1.000 - - - - 0.898 - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
6. si:dkey-2j6.2 si:dkey-2j6.2 5 1.882 - 1.000 - - - - 0.882 - -
7. zgc:171750 ENSDARG00000078638 4 1.866 - - 1.000 - - - - 0.866 - zgc:171750 [Source:ZFIN;Acc:ZDB-GENE-071004-30]
8. EFEMP1_1 EFEMP1_1 8 1.84 - - - - 0.958 - 0.882 - -
9. slc13a5 slc13a5 15 1.81 - - 0.850 - - - 0.960 - -
10. CABZ01071911.2 CABZ01071911.2 64 1.786 - 0.864 - - - - 0.922 - -
11. dazl ENSDARG00000036214 11 1.773 - - - - 0.958 - 0.815 - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
12. piwil1 ENSDARG00000041699 21 1.756 - - 0.920 - - - 0.836 - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
13. polm ENSDARG00000103470 49 1.755 - 0.873 - - - - 0.882 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
14. slc16a12a ENSDARG00000017773 47 1.733 - 0.952 - - - - 0.781 - - solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
15. si:dkey-56e5.2 si:dkey-56e5.2 14 1.724 - 1.000 - 0.724 - - - - -
16. FAM175B FAM175B 23 1.701 - 0.862 0.839 - - - - - -
17. CU856207.1 CU856207.1 87 1.701 - 0.701 - - - - 1.000 - -
18. rad21b ENSDARG00000035655 87 1.682 - 0.873 - - - - 0.809 - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
19. galr1 galr1 9 1.679 - - 0.909 0.770 - - - - -
20. APOLD1_1 APOLD1_1 590 1.67 - 0.806 - - - - 0.864 - -
21. PRODH PRODH 13 1.658 - - - - - - 0.821 0.837 -
22. rpz3 ENSDARG00000069728 11 1.653 - 0.840 - 0.813 - - - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
23. CABZ01112215.1 CABZ01112215.1 23 1.643 - 0.761 - - - - 0.882 - -
24. TMEM98 ENSDARG00000059743 214 1.611 - - 0.700 - - - 0.911 - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
25. si:dkey-11f4.16 ENSDARG00000099799 121 1.61 - 0.752 - - - - 0.858 - - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
26. FP102191.1 FP102191.1 21 1.606 - 0.761 - - - - 0.845 - -
27. caprin2 ENSDARG00000020749 39 1.6 - - - - 0.770 - 0.830 - - caprin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040812-2]
28. BACE2 ENSDARG00000044781 2 1.583 - - 0.770 0.813 - - - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
29. CABZ01080492.1 CABZ01080492.1 495 1.577 - - - - 0.782 - 0.795 - -
30. gabrd ENSDARG00000059763 52 1.568 - 0.840 0.728 - - - - - - gamma-aminobutyric acid (GABA) A receptor, delta [Source:ZFIN;Acc:ZDB-GENE-081105-170]
31. si:dkey-270b7.5 si:dkey-270b7.5 11 1.549 - - - - 0.748 - 0.801 - -
32. MFAP4 ENSDARG00000090783 8 1.542 - 0.761 - - - - - 0.781 - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
33. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 1.524 - - - - 0.743 - 0.781 - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
34. cdkl5 ENSDARG00000015240 68 1.503 - 0.764 - 0.739 - - - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
35. SLC46A2 ENSDARG00000075229 78 1.411 - - - - 0.707 - 0.704 - - solute carrier family 46 member 2 [Source:ZFIN;Acc:ZDB-GENE-170126-3]
36. TXNRD2 TXNRD2 14 1 - 1.000 - - - - - - -
37. hist2h3c_1 ENSDARG00000094154 45 1 - 1.000 - - - - - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
38. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - 1.000 - - - - - -
39. inpp5k inpp5k 2 1 - - 1.000 - - - - - -
40. si:dkey-29n19.3 si:dkey-29n19.3 0 1 - - 1.000 - - - - - -
41. si:ch211-110p13.9 ENSDARG00000093821 82 1 - 1.000 - - - - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
42. CABZ01083473.1 CABZ01083473.1 0 1 - - 1.000 - - - - - -
43. NDUFA4L2 1 1 - 1.000 - - - - - - - NDUFA4, mitochondrial complex associated like 2
44. btr09 ENSDARG00000054805, ENSDARG00000115798 20 1 - 1.000 - - - - - - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
45. ydjc ENSDARG00000062655 5 1 - - 1.000 - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
46. ECM1_1 ECM1_1 4 1 - - 1.000 - - - - - -
47. camkvl ENSDARG00000057000 40 1 - - 1.000 - - - - - - CaM kinase-like vesicle-associated, like [Source:ZFIN;Acc:ZDB-GENE-090311-58]
48. si:dkey-32m20.1 43 1 - - - - - - 1.000 - - si:dkey-32m20.1
49. PEG3_9 PEG3_9 3 1 - 1.000 - - - - - - -
50. mrc1b ENSDARG00000038822 73 1 - 1.000 - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
51. zmiz2 ENSDARG00000098683 1 1 - - 1.000 - - - - - - zinc finger, MIZ-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-285]
52. Metazoa_SRP_19 Metazoa_SRP_19 17 1 - - 1.000 - - - - - -
53. si:dkey-29j8.5 si:dkey-29j8.5 9 1 - 1.000 - - - - - - -
54. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - 1.000 - - - - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
55. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 - 1.000 - - - - - - -
56. SNORA7 SNORA7 100 1 - 1.000 - - - - - - -
57. cyp3c1l2 cyp3c1l2 53 1 - 1.000 - - - - - - -
58. NPTN NPTN 3 1 - - 1.000 - - - - - -
59. KSR1 KSR1 8 1 - 1.000 - - - - - - -
60. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - 1.000 - - - - - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
61. CU855880.2 CU855880.2 3 1 - - 1.000 - - - - - -
62. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 - 1.000 - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
63. si:dkey-269i1.2 si:dkey-269i1.2 6364 1 - - - - - - 1.000 - -
64. AL928852.1 AL928852.1 23 1 - 1.000 - - - - - - -
65. CACNA1H CACNA1H 34 1 - - 1.000 - - - - - -
66. exosc4 ENSDARG00000103432 21 1 - 1.000 - - - - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
67. flt3 ENSDARG00000058503 32 1 - - 1.000 - - - - - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
68. disp2 ENSDARG00000042846 53 1 - 1.000 - - - - - - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
69. AL929580.1 AL929580.1 1 1 - 1.000 - - - - - - -
70. BX323876.2 ENSDARG00000104577 62 1 - - 1.000 - - - - - -
71. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1 - 1.000 - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
72. foxf2b ENSDARG00000070389 67 1 - 1.000 - - - - - - - forkhead box F2b [Source:ZFIN;Acc:ZDB-GENE-041001-130]
73. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 1 - 1.000 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
74. cyp2aa2 ENSDARG00000104811 77 1 - 1.000 - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
75. arhgap23b ENSDARG00000026840 6 1 - 1.000 - - - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
76. si:ch211-219a15.3 ENSDARG00000087659 12 1 - 1.000 - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
77. gabbr1a ENSDARG00000018967 2 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
78. il10ra ENSDARG00000100383 6 1 - 1.000 - - - - - - - interleukin 10 receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-070905-4]
79. il15l ENSDARG00000007743, ENSDARG00000109605 17 1 - 1.000 - - - - - - - interleukin 15, like [Source:ZFIN;Acc:ZDB-GENE-041111-173]
80. BX571712.3 ENSDARG00000098050 1 1 - 1.000 - - - - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
81. lratb 3 1 - 1.000 - - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
82. CU694320.1 CU694320.1 6 1 - 1.000 - - - - - - -
83. CR352256.1 CR352256.1 3 1 - - 1.000 - - - - - -
84. RBBP6_1 RBBP6_1 1 1 - 1.000 - - - - - - -
85. CUZD1_3 CUZD1_3 9 1 - - 1.000 - - - - - -
86. zgc:175135 ENSDARG00000077741, ENSDARG00000079534, ENSDARG00000105499 0 1 - - 1.000 - - - - - - zgc:175135 [Source:ZFIN;Acc:ZDB-GENE-080214-1]
87. cyp46a2 cyp46a2 38 1 - 1.000 - - - - - - -
88. CABZ01081656.1 CABZ01081656.1 14 1 - - 1.000 - - - - - -
89. BX088691.1 BX088691.1 9 1 - 1.000 - - - - - - -
90. MUC5B MUC5B 1 1 - 1.000 - - - - - - -
91. si:dkey-238f9.1 ENSDARG00000079446 51 1 - 1.000 - - - - - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
92. phc2b ENSDARG00000013224 3 1 - - 1.000 - - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
93. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 1 - - 1.000 - - - - - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
94. camta2 ENSDARG00000092799 5 1 - - 1.000 - - - - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
95. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 - 1.000 - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
96. C6H21orf58 C6H21orf58 14 1 - 1.000 - - - - - - -
97. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 1 - 1.000 - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
98. pxn pxn 10 1 - 1.000 - - - - - - -
99. CCBL2 0 1 - - 1.000 - - - - - - cysteine conjugate-beta lyase 2, transcript variant X4
100. fancm ENSDARG00000103933 1 1 - 1.000 - - - - - - - FA complementation group M [Source:ZFIN;Acc:ZDB-GENE-090929-1]

There are 971 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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