Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for irf3

Gene Name Gene ID Reads Annotation
irf3 ENSDARG00000076251 8 interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]










Genes with expression patterns similar to irf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irf3 ENSDARG00000076251 8 6 - 1.000 1.000 1.000 1.000 - 1.000 1.000 - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
2. si:ch211-207c6.6 si:ch211-207c6.6 32 2.537 - - 1.000 - 0.816 - 0.721 - -
3. C24H16orf11 C24H16orf11 32 1.964 - 0.964 1.000 - - - - - -
4. mxa ENSDARG00000021688 14 1.958 - - - - 0.958 - 1.000 - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
5. si:ch211-67f13.8 ENSDARG00000079155 7 1.898 - 1.000 - - - - 0.898 - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
6. si:dkey-2j6.2 si:dkey-2j6.2 5 1.882 - 1.000 - - - - 0.882 - -
7. zgc:171750 ENSDARG00000078638 4 1.866 - - 1.000 - - - - 0.866 - zgc:171750 [Source:ZFIN;Acc:ZDB-GENE-071004-30]
8. EFEMP1_1 EFEMP1_1 8 1.84 - - - - 0.958 - 0.882 - -
9. slc13a5 slc13a5 15 1.81 - - 0.850 - - - 0.960 - -
10. CABZ01071911.2 CABZ01071911.2 64 1.786 - 0.864 - - - - 0.922 - -
11. dazl ENSDARG00000036214 11 1.773 - - - - 0.958 - 0.815 - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
12. piwil1 ENSDARG00000041699 21 1.756 - - 0.920 - - - 0.836 - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
13. polm ENSDARG00000103470 49 1.755 - 0.873 - - - - 0.882 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
14. slc16a12a ENSDARG00000017773 47 1.733 - 0.952 - - - - 0.781 - - solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
15. si:dkey-56e5.2 si:dkey-56e5.2 14 1.724 - 1.000 - 0.724 - - - - -
16. CU856207.1 CU856207.1 87 1.701 - 0.701 - - - - 1.000 - -
17. FAM175B FAM175B 23 1.701 - 0.862 0.839 - - - - - -
18. rad21b ENSDARG00000035655 87 1.682 - 0.873 - - - - 0.809 - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
19. galr1 galr1 9 1.679 - - 0.909 0.770 - - - - -
20. APOLD1_1 APOLD1_1 590 1.67 - 0.806 - - - - 0.864 - -
21. PRODH PRODH 13 1.658 - - - - - - 0.821 0.837 -
22. rpz3 ENSDARG00000069728 11 1.653 - 0.840 - 0.813 - - - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
23. CABZ01112215.1 CABZ01112215.1 23 1.643 - 0.761 - - - - 0.882 - -
24. TMEM98 ENSDARG00000059743 214 1.611 - - 0.700 - - - 0.911 - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
25. si:dkey-11f4.16 ENSDARG00000099799 121 1.61 - 0.752 - - - - 0.858 - - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
26. FP102191.1 FP102191.1 21 1.606 - 0.761 - - - - 0.845 - -
27. caprin2 ENSDARG00000020749 39 1.6 - - - - 0.770 - 0.830 - - caprin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040812-2]
28. BACE2 ENSDARG00000044781 2 1.583 - - 0.770 0.813 - - - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
29. CABZ01080492.1 CABZ01080492.1 495 1.577 - - - - 0.782 - 0.795 - -
30. gabrd ENSDARG00000059763 52 1.568 - 0.840 0.728 - - - - - - gamma-aminobutyric acid (GABA) A receptor, delta [Source:ZFIN;Acc:ZDB-GENE-081105-170]
31. si:dkey-270b7.5 si:dkey-270b7.5 11 1.549 - - - - 0.748 - 0.801 - -
32. MFAP4 ENSDARG00000090783 8 1.542 - 0.761 - - - - - 0.781 - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
33. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 1.524 - - - - 0.743 - 0.781 - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
34. cdkl5 ENSDARG00000015240 68 1.503 - 0.764 - 0.739 - - - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
35. SLC46A2 ENSDARG00000075229 78 1.411 - - - - 0.707 - 0.704 - - solute carrier family 46 member 2 [Source:ZFIN;Acc:ZDB-GENE-170126-3]
36. U3_1 U3_1 61 1 - 1.000 - - - - - - -
37. slc5a9 ENSDARG00000005518 16 1 - - 1.000 - - - - - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
38. si:dkey-178e17.1 ENSDARG00000080000 4 1 - - 1.000 - - - - - - si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
39. ACP2 ENSDARG00000007244 6 1 - 1.000 - - - - - - - acid phosphatase 2, lysosomal [Source:ZFIN;Acc:ZDB-GENE-050306-40]
40. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - - 1.000 - - - - - -
41. znf536 ENSDARG00000103648 6 1 - 1.000 - - - - - - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
42. zgc:173737 ENSDARG00000058299 6 1 - 1.000 - - - - - - - zgc:173737 [Source:ZFIN;Acc:ZDB-GENE-071004-109]
43. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1 - 1.000 - - - - - - - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
44. TENM2_1 ENSDARG00000037122 67 1 - 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
45. NELL2A ENSDARG00000090690 840 1 - 1.000 - - - - - - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
46. si:dkey-204h11.12 si:dkey-204h11.12 3 1 - 1.000 - - - - - - -
47. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1 - 1.000 - - - - - - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
48. SLC5A10 ENSDARG00000074212 11 1 - - 1.000 - - - - - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
49. TOR4A_1 TOR4A_1 20 1 - 1.000 - - - - - - -
50. DNAH3 ENSDARG00000068468 3 1 - 1.000 - - - - - - - dynein axonemal heavy chain 3 [Source:ZFIN;Acc:ZDB-GENE-091112-7]
51. UNC13C 119 1 - 1.000 - - - - - - - unc-13 homolog C (C. elegans)
52. THAP9 THAP9 8 1 - - - - - - 1.000 - -
53. si:dkey-163m14.6 5 1 - - 1.000 - - - - - - si:dkey-163m14.6
54. slc34a1a ENSDARG00000028824 35 1 - 1.000 - - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
55. or112-1 ENSDARG00000077211 2 1 - - 1.000 - - - - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
56. si:dkey-103k4.5 si:dkey-103k4.5 11 1 - 1.000 - - - - - - -
57. si:ch211-57m13.1 ENSDARG00000095927 1 1 - 1.000 - - - - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
58. CU184832.2 CU184832.2 35 1 - - - - - - 1.000 - -
59. pcgf5b ENSDARG00000052388 163 1 - 1.000 - - - - - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
60. ARHGEF38 ENSDARG00000079377 9 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
61. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - - - - 1.000 - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
62. Metazoa_SRP_24 Metazoa_SRP_24 4 1 - 1.000 - - - - - - -
63. cldn15b ENSDARG00000101109 4 1 - 1.000 - - - - - - - claudin 15b [Source:ZFIN;Acc:ZDB-GENE-060421-7652]
64. si:dkey-256h2.1 ENSDARG00000021849 38 1 - 1.000 - - - - - - - si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
65. si:dkey-165i8.5 si:dkey-165i8.5 21 1 - 1.000 - - - - - - -
66. flh flh 47 1 - 1.000 - - - - - - -
67. CABZ01075242.1 ENSDARG00000114227 9 1 - - 1.000 - - - - - -
68. itgbl1 ENSDARG00000040985 705 1 - 1.000 - - - - - - - integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
69. tdrd6 ENSDARG00000070052 1 1 - 1.000 - - - - - - - tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
70. CR759882.1 ENSDARG00000097207 0 1 - - 1.000 - - - - - -
71. crygm2e ENSDARG00000044875 1 1 - - 1.000 - - - - - - crystallin, gamma M2e [Source:ZFIN;Acc:ZDB-GENE-081105-116]
72. psmb11 psmb11 5 1 - 1.000 - - - - - - -
73. dre-mir-196c dre-mir-196c 2 1 - 1.000 - - - - - - -
74. v2rx3 ENSDARG00000061873 1 1 - 1.000 - - - - - - - vomeronasal 2 receptor, x3 [Source:ZFIN;Acc:ZDB-GENE-050419-262]
75. si:dkey-11f7.4 si:dkey-11f7.4 1 1 - - 1.000 - - - - - -
76. si:dkey-56d12.4 ENSDARG00000070845 2 1 - 1.000 - - - - - - - si:dkey-56d12.4 [Source:ZFIN;Acc:ZDB-GENE-060531-147]
77. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 - 1.000 - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
78. si:dkeyp-41f9.3 ENSDARG00000075600 2 1 - 1.000 - - - - - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
79. CU179643.1 ENSDARG00000086489 25 1 - 1.000 - - - - - - -
80. KCNMB3 KCNMB3 5 1 - - 1.000 - - - - - -
81. ADAP2 ENSDARG00000070565 29 1 - 1.000 - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
82. nmbr ENSDARG00000054152 0 1 - - 1.000 - - - - - - neuromedin B receptor [Source:ZFIN;Acc:ZDB-GENE-041014-369]
83. zgc:174700 zgc:174700 35 1 - - - - - - 1.000 - -
84. or111-11 ENSDARG00000041019 5 1 - - 1.000 - - - - - - odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
85. iqcd ENSDARG00000035551 7 1 - 1.000 - - - - - - - IQ motif containing D [Source:ZFIN;Acc:ZDB-GENE-060526-200]
86. cacna2d2 cacna2d2 16 1 - 1.000 - - - - - - -
87. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - 1.000 - - - - - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
88. crhbp ENSDARG00000024831 63 1 - 1.000 - - - - - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
89. si:dkey-26i24.2 si:dkey-26i24.2 3 1 - - 1.000 - - - - - -
90. kcnq2a ENSDARG00000075307 7 1 - 1.000 - - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
91. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
92. b3gat1 b3gat1 77 1 - 1.000 - - - - - - -
93. MTMR3 ENSDARG00000093364, ENSDARG00000098201 11 1 - 1.000 - - - - - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
94. CR388413.1 ENSDARG00000100537 1 1 - - 1.000 - - - - - -
95. si:zfos-1505d6.3 ENSDARG00000089966 3 1 - 1.000 - - - - - - - si:zfos-1505d6.3 [Source:ZFIN;Acc:ZDB-GENE-120214-22]
96. si:ch211-253p18.2 ENSDARG00000092770 21 1 - 1.000 - - - - - - - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
97. si:dkeyp-59a8.3 si:dkeyp-59a8.3 3 1 - 1.000 - - - - - - -
98. hid1b ENSDARG00000100583 35 1 - 1.000 - - - - - - - HID1 domain containing b [Source:ZFIN;Acc:ZDB-GENE-040718-239]
99. si:dkey-115f9.3 7 1 - - 1.000 - - - - - - si:dkey-115f9.3, transcript variant X2
100. SNORA77 SNORA77 2 1 - 1.000 - - - - - - -

There are 971 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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