Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for irf3

Gene Name Gene ID Reads Annotation
irf3 ENSDARG00000076251 8 interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]










Genes with expression patterns similar to irf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irf3 ENSDARG00000076251 8 6 - 1.000 1.000 1.000 1.000 - 1.000 1.000 - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
2. si:ch211-207c6.6 si:ch211-207c6.6 32 2.537 - - 1.000 - 0.816 - 0.721 - -
3. C24H16orf11 C24H16orf11 32 1.964 - 0.964 1.000 - - - - - -
4. mxa ENSDARG00000021688 14 1.958 - - - - 0.958 - 1.000 - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
5. si:ch211-67f13.8 ENSDARG00000079155 7 1.898 - 1.000 - - - - 0.898 - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
6. si:dkey-2j6.2 si:dkey-2j6.2 5 1.882 - 1.000 - - - - 0.882 - -
7. zgc:171750 ENSDARG00000078638 4 1.866 - - 1.000 - - - - 0.866 - zgc:171750 [Source:ZFIN;Acc:ZDB-GENE-071004-30]
8. EFEMP1_1 EFEMP1_1 8 1.84 - - - - 0.958 - 0.882 - -
9. slc13a5 slc13a5 15 1.81 - - 0.850 - - - 0.960 - -
10. CABZ01071911.2 CABZ01071911.2 64 1.786 - 0.864 - - - - 0.922 - -
11. dazl ENSDARG00000036214 11 1.773 - - - - 0.958 - 0.815 - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
12. piwil1 ENSDARG00000041699 21 1.756 - - 0.920 - - - 0.836 - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
13. polm ENSDARG00000103470 49 1.755 - 0.873 - - - - 0.882 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
14. slc16a12a ENSDARG00000017773 47 1.733 - 0.952 - - - - 0.781 - - solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
15. si:dkey-56e5.2 si:dkey-56e5.2 14 1.724 - 1.000 - 0.724 - - - - -
16. FAM175B FAM175B 23 1.701 - 0.862 0.839 - - - - - -
17. CU856207.1 CU856207.1 87 1.701 - 0.701 - - - - 1.000 - -
18. rad21b ENSDARG00000035655 87 1.682 - 0.873 - - - - 0.809 - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
19. galr1 galr1 9 1.679 - - 0.909 0.770 - - - - -
20. APOLD1_1 APOLD1_1 590 1.67 - 0.806 - - - - 0.864 - -
21. PRODH PRODH 13 1.658 - - - - - - 0.821 0.837 -
22. rpz3 ENSDARG00000069728 11 1.653 - 0.840 - 0.813 - - - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
23. CABZ01112215.1 CABZ01112215.1 23 1.643 - 0.761 - - - - 0.882 - -
24. TMEM98 ENSDARG00000059743 214 1.611 - - 0.700 - - - 0.911 - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
25. si:dkey-11f4.16 ENSDARG00000099799 121 1.61 - 0.752 - - - - 0.858 - - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
26. FP102191.1 FP102191.1 21 1.606 - 0.761 - - - - 0.845 - -
27. caprin2 ENSDARG00000020749 39 1.6 - - - - 0.770 - 0.830 - - caprin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040812-2]
28. BACE2 ENSDARG00000044781 2 1.583 - - 0.770 0.813 - - - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
29. CABZ01080492.1 CABZ01080492.1 495 1.577 - - - - 0.782 - 0.795 - -
30. gabrd ENSDARG00000059763 52 1.568 - 0.840 0.728 - - - - - - gamma-aminobutyric acid (GABA) A receptor, delta [Source:ZFIN;Acc:ZDB-GENE-081105-170]
31. si:dkey-270b7.5 si:dkey-270b7.5 11 1.549 - - - - 0.748 - 0.801 - -
32. MFAP4 ENSDARG00000090783 8 1.542 - 0.761 - - - - - 0.781 - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
33. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 1.524 - - - - 0.743 - 0.781 - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
34. cdkl5 ENSDARG00000015240 68 1.503 - 0.764 - 0.739 - - - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
35. SLC46A2 ENSDARG00000075229 78 1.411 - - - - 0.707 - 0.704 - - solute carrier family 46 member 2 [Source:ZFIN;Acc:ZDB-GENE-170126-3]
36. si:dkey-238f9.1 ENSDARG00000079446 51 1 - 1.000 - - - - - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
37. camta2 ENSDARG00000092799 5 1 - - 1.000 - - - - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
38. si:dkey-103k4.5 si:dkey-103k4.5 11 1 - 1.000 - - - - - - -
39. fancm ENSDARG00000103933 1 1 - 1.000 - - - - - - - FA complementation group M [Source:ZFIN;Acc:ZDB-GENE-090929-1]
40. C6H21orf58 C6H21orf58 14 1 - 1.000 - - - - - - -
41. gabbr1a ENSDARG00000018967 2 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
42. si:dkey-165i8.5 si:dkey-165i8.5 21 1 - 1.000 - - - - - - -
43. CU856520.1 ENSDARG00000098941 2 1 - - 1.000 - - - - - -
44. nabp1b ENSDARG00000043685 5 1 - - - - 1.000 - - - - nucleic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050913-74]
45. RBBP6_1 RBBP6_1 1 1 - 1.000 - - - - - - -
46. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - 1.000 - - - - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
47. crhb ENSDARG00000027657 9 1 - - 1.000 - - - - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
48. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1 - 1.000 - - - - - - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
49. il15l ENSDARG00000007743, ENSDARG00000109605 17 1 - 1.000 - - - - - - - interleukin 15, like [Source:ZFIN;Acc:ZDB-GENE-041111-173]
50. disp2 ENSDARG00000042846 53 1 - 1.000 - - - - - - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
51. Metazoa_SRP_19 Metazoa_SRP_19 17 1 - - 1.000 - - - - - -
52. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - 1.000 - - - - - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
53. TENM2_1 ENSDARG00000037122 67 1 - 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
54. AL929580.1 AL929580.1 1 1 - 1.000 - - - - - - -
55. CABZ01048675.1 CABZ01048675.1 4 1 - 1.000 - - - - - - -
56. crhbp ENSDARG00000024831 63 1 - 1.000 - - - - - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
57. BX005364.1 ENSDARG00000092439 1 1 - 1.000 - - - - - - -
58. si:dkey-11f7.4 si:dkey-11f7.4 1 1 - - 1.000 - - - - - -
59. or112-1 ENSDARG00000077211 2 1 - - 1.000 - - - - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
60. si:dkey-163m14.6 5 1 - - 1.000 - - - - - - si:dkey-163m14.6
61. lratb 3 1 - 1.000 - - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
62. si:dkey-206f10.1 ENSDARG00000032838 18 1 - 1.000 - - - - - - - si:dkey-206f10.1 [Source:ZFIN;Acc:ZDB-GENE-041014-154]
63. CCBL2 0 1 - - 1.000 - - - - - - cysteine conjugate-beta lyase 2, transcript variant X4
64. si:ch211-57m13.1 ENSDARG00000095927 1 1 - 1.000 - - - - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
65. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - 1.000 - - - - - -
66. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - 1.000 - - - - - - -
67. CU179643.1 ENSDARG00000086489 25 1 - 1.000 - - - - - - -
68. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1 - 1.000 - - - - - - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
69. pdlim3a ENSDARG00000011023, ENSDARG00000115861 3 1 - - 1.000 - - - - - - PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-050505-1]
70. SLC13A5 SLC13A5 31 1 - 1.000 - - - - - - -
71. SNORA7 SNORA7 100 1 - 1.000 - - - - - - -
72. NPTN NPTN 3 1 - - 1.000 - - - - - -
73. BX571712.3 ENSDARG00000098050 1 1 - 1.000 - - - - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
74. foxf2b ENSDARG00000070389 67 1 - 1.000 - - - - - - - forkhead box F2b [Source:ZFIN;Acc:ZDB-GENE-041001-130]
75. AL928852.1 AL928852.1 23 1 - 1.000 - - - - - - -
76. CABZ01083473.1 CABZ01083473.1 0 1 - - 1.000 - - - - - -
77. nmbr ENSDARG00000054152 0 1 - - 1.000 - - - - - - neuromedin B receptor [Source:ZFIN;Acc:ZDB-GENE-041014-369]
78. UNC13C 119 1 - 1.000 - - - - - - - unc-13 homolog C (C. elegans)
79. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - - 1.000 - - - - - -
80. inpp5k inpp5k 2 1 - - 1.000 - - - - - -
81. itgbl1 ENSDARG00000040985 705 1 - 1.000 - - - - - - - integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
82. CU855880.2 CU855880.2 3 1 - - 1.000 - - - - - -
83. TXNRD2 TXNRD2 14 1 - 1.000 - - - - - - -
84. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 - 1.000 - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
85. si:dkey-26i24.2 si:dkey-26i24.2 3 1 - - 1.000 - - - - - -
86. mcf2lb ENSDARG00000076480 50 1 - 1.000 - - - - - - - mcf.2 cell line derived transforming sequence-like b [Source:ZFIN;Acc:ZDB-GENE-081104-416]
87. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - - - - 1.000 - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
88. si:dkey-178e17.1 ENSDARG00000080000 4 1 - - 1.000 - - - - - - si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
89. CABZ01032469.1 CABZ01032469.1 34 1 - 1.000 - - - - - - -
90. CABZ01057633.1 CABZ01057633.1 39 1 - 1.000 - - - - - - -
91. slc10a3 ENSDARG00000103220 30 1 - 1.000 - - - - - - - solute carrier family 10, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2347]
92. pcgf5b ENSDARG00000052388 163 1 - 1.000 - - - - - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
93. si:ch211-110p13.9 ENSDARG00000093821 82 1 - 1.000 - - - - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
94. kcnq2a ENSDARG00000075307 7 1 - 1.000 - - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
95. ECM1_1 ECM1_1 4 1 - - 1.000 - - - - - -
96. CR388413.1 ENSDARG00000100537 1 1 - - 1.000 - - - - - -
97. zgc:173737 ENSDARG00000058299 6 1 - 1.000 - - - - - - - zgc:173737 [Source:ZFIN;Acc:ZDB-GENE-071004-109]
98. il10ra ENSDARG00000100383 6 1 - 1.000 - - - - - - - interleukin 10 receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-070905-4]
99. CU184832.2 CU184832.2 35 1 - - - - - - 1.000 - -
100. CR759882.1 ENSDARG00000097207 0 1 - - 1.000 - - - - - -

There are 971 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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