Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ipo4

Gene Name Gene ID Reads Annotation
ipo4 ENSDARG00000041493 1578 importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]










Genes with expression patterns similar to ipo4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ipo4 ENSDARG00000041493 1578 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
2. znf280d ENSDARG00000077013 1387 2.456 - 0.724 - - 0.993 - 0.739 - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
3. polr1a ENSDARG00000098375 1224 2.231 - 0.816 - - - 0.708 0.707 - - RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
4. nmt1a ENSDARG00000052966 5918 1.834 - 0.844 - - 0.990 - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
5. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.823 - 0.849 - - 0.974 - - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
6. actr1 ENSDARG00000011611 3879 1.812 - 0.856 - - 0.956 - - - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
7. efnb3b ENSDARG00000042277 5823 1.789 - 0.847 - - 0.942 - - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
8. thoc7 ENSDARG00000015394 3824 1.772 - 0.781 - - 0.991 - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
9. si:ch211-197h24.6 ENSDARG00000091631 1933 1.771 - - - - 0.990 - 0.781 - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
10. rbm25 rbm25 3629 1.77 - - - - 0.971 - 0.799 - -
11. minos1 ENSDARG00000101619 5273 1.762 - 0.798 - - 0.964 - - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
12. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.75 - 0.765 - - 0.985 - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
13. chd4b ENSDARG00000025789 14299 1.743 - 0.827 - - 0.916 - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
14. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.738 - 0.800 - - 0.938 - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
15. col11a1b ENSDARG00000009014 9998 1.722 - 0.729 - - 0.993 - - - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
16. kdm6bb ENSDARG00000056929 4807 1.705 - 0.717 - - 0.988 - - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
17. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.7 - 0.709 - - 0.991 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
18. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 1.699 - 0.708 - - 0.991 - - - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
19. armc9 ENSDARG00000087299 459 1.699 - - - - 0.992 - - 0.707 - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
20. cdk5 ENSDARG00000056683 1998 1.697 - 0.703 - - 0.994 - - - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
21. CT955967.1 ENSDARG00000099956 2885 1.69 - - - - 0.984 - - - 0.706
22. tomm40l ENSDARG00000036721 1714 1.689 - 0.870 - - - - 0.819 - - translocase of outer mitochondrial membrane 40 homolog, like [Source:ZFIN;Acc:ZDB-GENE-040426-2319]
23. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.686 - - - - 0.985 - - - 0.701 prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
24. jarid2b ENSDARG00000062268 2206 1.672 - - - - 0.952 - 0.720 - - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
25. hadhb ENSDARG00000102055 9700 1.665 - 0.735 - - 0.930 - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
26. CBFA2T3 ENSDARG00000079012 6799 1.659 - 0.860 - - - - 0.799 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
27. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.651 - - - - 0.950 - 0.701 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
28. PHB2 PHB2 3755 1.637 - 0.889 - - - - 0.748 - -
29. mrps18b ENSDARG00000007065 2121 1.637 - 0.862 - - - 0.775 - - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
30. ddx49 ENSDARG00000012899 1604 1.622 - 0.829 - - - - 0.793 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
31. nudt3a ENSDARG00000016256 2713 1.615 - 0.873 - - - - 0.742 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
32. dnajc15 ENSDARG00000038309 1274 1.602 - 0.853 - - - - 0.749 - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
33. apex1 ENSDARG00000045843 6345 1.59 - 0.797 - - - - 0.793 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
34. znf292b ENSDARG00000043973 3791 1.59 - - - - 0.829 - 0.761 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
35. mcm5 ENSDARG00000019507 6407 1.588 - 0.786 - - 0.802 - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
36. fam203a fam203a 570 1.571 - 0.849 - - - 0.722 - - -
37. pbxip1a ENSDARG00000071015 4960 1.57 - 0.848 - - - - 0.722 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
38. PYURF ENSDARG00000045773 4576 1.558 0.733 0.825 - - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
39. arid2 ENSDARG00000007413 4413 1.547 - 0.845 - - - - 0.702 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
40. cox11 ENSDARG00000061004, ENSDARG00000115002 423 1.543 - - - - - 0.770 0.773 - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
41. myoz2a ENSDARG00000012311 1373 1.529 - 0.793 - - - - 0.736 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
42. sema6a ENSDARG00000102165 1401 1.525 - 0.819 - - - - 0.706 - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
43. ubr5 ENSDARG00000018192 9267 1.524 - 0.734 - - 0.790 - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
44. PPIP5K1 PPIP5K1 997 1.521 - 0.791 - - - - 0.730 - -
45. pygmb ENSDARG00000013317 5454 1.52 - 0.784 - - - - 0.736 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
46. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.515 - 0.790 - 0.725 - - - - -
47. VPS37B_1 VPS37B_1 1816 1.514 - 0.705 - - - - - 0.809 -
48. tcf7l1b ENSDARG00000007369 2785 1.513 - 0.719 - - - - 0.794 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
49. plch1 ENSDARG00000079253 1216 1.511 - 0.793 - - - - 0.718 - - phospholipase C, eta 1 [Source:ZFIN;Acc:ZDB-GENE-060503-398]
50. ahcyl2 ENSDARG00000039343 1210 1.511 - 0.797 - - - - 0.714 - - adenosylhomocysteinase-like 2 [Source:ZFIN;Acc:ZDB-GENE-040115-5]
51. tha1 ENSDARG00000076225 183 1.508 - - - - - 0.802 - 0.706 - threonine aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-14]
52. C25H12orf73 C25H12orf73 2031 1.508 - 0.797 - - - - 0.711 - -
53. pak2b ENSDARG00000018476 4331 1.506 - 0.731 - - - - 0.775 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
54. mettl21d mettl21d 94 1.501 - - - - - 0.740 0.761 - -
55. CR388231.3 ENSDARG00000105601 2404 1.5 - 0.775 - - - - 0.725 - -
56. rev3l ENSDARG00000058801 784 1.497 - 0.750 - - - - 0.747 - - REV3-like, polymerase (DNA directed), zeta, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050302-55]
57. slc7a6os ENSDARG00000010596 1599 1.494 - 0.783 - - - - 0.711 - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
58. meis2b ENSDARG00000077840 5166 1.493 - 0.734 - - - - 0.759 - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
59. wu:fb17g07 wu:fb17g07 10567 1.493 - 0.768 - - - - 0.725 - -
60. gipc1 ENSDARG00000104483 2913 1.491 - 0.763 - - - - 0.728 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
61. srpk3 ENSDARG00000005916 1546 1.49 - 0.739 - - - - 0.751 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
62. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.487 - 0.761 - - - - 0.726 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
63. SERBP1 SERBP1 9276 1.486 - - - - 0.763 - 0.723 - -
64. txn2 ENSDARG00000034777 4071 1.471 - 0.731 - - - - 0.740 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
65. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.471 - 0.721 - - - - 0.750 - - zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
66. tamm41 ENSDARG00000100157 1116 1.468 - 0.759 - - - - 0.709 - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
67. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.458 - 0.716 - - - - 0.742 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
68. uqcrc2a ENSDARG00000014794 3949 1.453 - 0.732 - - - - 0.721 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
69. grsf1 ENSDARG00000053021 2752 1.451 - 0.746 - - - - 0.705 - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
70. dnmt3ab ENSDARG00000015566 1206 1.444 - 0.721 - - - - 0.723 - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
71. MSS51 ENSDARG00000075463 428 1.442 - 0.720 - - - 0.722 - - - MSS51 mitochondrial translational activator [Source:ZFIN;Acc:ZDB-GENE-130530-775]
72. mpp6b ENSDARG00000029761 2142 1.44 - 0.738 - - - - 0.702 - - membrane protein, palmitoylated 6b (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-040426-775]
73. gse1 ENSDARG00000062020 2337 1.426 - 0.722 - - - - 0.704 - - Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
74. pex19 ENSDARG00000004891 2317 1.419 - 0.717 - - 0.702 - - - - peroxisomal biogenesis factor 19 [Source:ZFIN;Acc:ZDB-GENE-050417-424]
75. RANBP2 ENSDARG00000093125 1854 1.412 - 0.708 - 0.704 - - - - - RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]
76. lamb2l ENSDARG00000033950 952 1.411 - - - - - - 0.703 - 0.708 laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
77. slc20a1b ENSDARG00000010641 2564 0.995 - - - - 0.995 - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
78. ticrr ENSDARG00000045605 739 0.994 - - - - 0.994 - - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
79. il12rb2l ENSDARG00000074850 407 0.994 - - - - 0.994 - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
80. cdkn1a ENSDARG00000076554 591 0.993 - - - - 0.993 - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
81. upb1 ENSDARG00000011521, ENSDARG00000116790 920 0.993 - - - - 0.993 - - - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
82. ccdc53 982 0.993 - - - - 0.993 - - - - coiled-coil domain containing 53
83. ttc13 ENSDARG00000063242 1360 0.993 - - - - 0.993 - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
84. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 0.993 - - - - 0.993 - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
85. cog4 ENSDARG00000054264 785 0.993 - - - - 0.993 - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
86. sh3bp5a ENSDARG00000100529 642 0.993 - - - - 0.993 - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
87. USP2_1 USP2_1 544 0.993 - - - - 0.993 - - - -
88. CABZ01027552.1 CABZ01027552.1 760 0.993 - - - - 0.993 - - - -
89. WIPF3 WIPF3 804 0.993 - - - - 0.993 - - - -
90. zgc:110699 ENSDARG00000017474 381 0.992 - - - - 0.992 - - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
91. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 0.992 - - - - 0.992 - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
92. rnaseh1 ENSDARG00000042571 922 0.992 - - - - 0.992 - - - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
93. si:dkey-251i10.2 ENSDARG00000093957 4424 0.992 - - - - 0.992 - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
94. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.992 - - - - 0.992 - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
95. tarsl2 ENSDARG00000092774 505 0.992 - - - - 0.992 - - - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
96. SNORA70 SNORA70 511 0.992 - - - - 0.992 - - - -
97. otx2 766 0.992 - - - - 0.992 - - - - orthodenticle homeobox 2, transcript variant X2
98. atp1b4 ENSDARG00000053262 1337 0.992 - - - - 0.992 - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
99. clasp1a ENSDARG00000010280 1158 0.992 - - - - 0.992 - - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
100. nsl1 ENSDARG00000024471 1269 0.991 - - - - 0.991 - - - - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]

There are 1536 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA