Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ints3

Gene Name Gene ID Reads Annotation
ints3 ENSDARG00000016811 339 integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]










Genes with expression patterns similar to ints3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ints3 ENSDARG00000016811 339 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
2. rgs3a ENSDARG00000099746 727 2.444 - 0.846 - - - 0.778 0.820 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
3. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.712 - - - - - 0.864 0.848 - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
4. retsatl ENSDARG00000034989 41 1.706 - 0.824 - - - 0.882 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
5. PEG3_40 PEG3_40 186 1.696 - 0.822 - - - 0.874 - - -
6. dbpa ENSDARG00000063014 107 1.662 - 0.716 - - - 0.946 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
7. CDH8 172 1.653 - - - - - 0.821 0.832 - - cadherin 8
8. si:dkey-270b7.1 si:dkey-270b7.1 83 1.64 - 0.791 - - - 0.849 - - -
9. cenpk ENSDARG00000039616 744 1.635 - - - - - 0.919 0.716 - - centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
10. MIS12 ENSDARG00000026454 649 1.628 - - - - - 0.844 0.784 - - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
11. tenm1 ENSDARG00000003403 148 1.628 - 0.743 - - - 0.885 - - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
12. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.621 - 0.750 - - - 0.871 - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
13. SLC36A4 ENSDARG00000039661 175 1.621 - - - - - 0.898 0.723 - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
14. LSM5 ENSDARG00000071573 371 1.615 - 0.791 - - - 0.824 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
15. kat2b ENSDARG00000062634 276 1.61 - - - - - - 0.884 - 0.726 K(lysine) acetyltransferase 2B [Source:ZFIN;Acc:ZDB-GENE-060503-207]
16. TULP3 TULP3 433 1.603 - 0.889 - - - 0.714 - - -
17. caly ENSDARG00000036008 1002 1.602 - - - - - 0.846 0.756 - - calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
18. MLLT1 MLLT1 349 1.601 - - - - - 0.837 0.764 - -
19. atoh1b ENSDARG00000099564 494 1.598 - - - 0.737 - 0.861 - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
20. DACT3_1 DACT3_1 1235 1.594 - - - 0.750 - 0.844 - - -
21. CU638738.1 CU638738.1 131 1.571 - 0.732 - - - 0.839 - - -
22. smarcc1a ENSDARG00000017397 2957 1.561 - - - 0.751 - - 0.810 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
23. rangap1a ENSDARG00000041317 1456 1.56 - - - - - 0.793 0.767 - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
24. si:dkey-264b2.3 19 1.551 - 0.716 - - - 0.835 - - - si:dkey-264b2.3, transcript variant X2
25. CT030046.1 CT030046.1 190 1.547 - 0.710 - - - 0.837 - - -
26. sin3ab ENSDARG00000059812 2140 1.54 - - - - - 0.766 0.774 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
27. PPFIBP1_2 PPFIBP1_2 1274 1.539 - - - - - 0.811 0.728 - -
28. hs3st3l ENSDARG00000059903 184 1.53 - - - - - 0.784 0.746 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
29. OTOF OTOF 195 1.528 - 0.791 - - - 0.737 - - -
30. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.528 - 0.816 - - - 0.712 - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
31. irx5a ENSDARG00000034043 1694 1.525 - - - 0.820 - 0.705 - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
32. hoxc6b ENSDARG00000101954 967 1.521 - - - - - 0.770 0.751 - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
33. ust ENSDARG00000006044 322 1.514 - 0.714 - - - 0.800 - - - uronyl-2-sulfotransferase [Source:ZFIN;Acc:ZDB-GENE-041001-163]
34. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 1.514 - - - 0.706 - - 0.808 - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
35. glod4 ENSDARG00000042509, ENSDARG00000113811 297 1.496 0.702 - - - - 0.794 - - - glyoxalase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040912-38]
36. bcl11ab ENSDARG00000063153 3032 1.496 - - - 0.792 - 0.704 - - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
37. erfl3 ENSDARG00000062801 149 1.484 - 0.749 - - - 0.735 - - - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
38. leo1 ENSDARG00000055357 1644 1.478 - - - 0.704 - - 0.774 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
39. st8sia2 ENSDARG00000018788 2183 1.458 - - - 0.745 - 0.713 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
40. senp3b ENSDARG00000056741 1296 1.453 - 0.710 - - - - 0.743 - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
41. cib1 ENSDARG00000103118 291 1.444 - - - - - 0.720 0.724 - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
42. si:ch211-202e12.3 401 1.438 - - - 0.721 - 0.717 - - - si:ch211-202e12.3, transcript variant X6
43. mdkb ENSDARG00000020708 5393 1.435 - - - - - 0.725 0.710 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
44. FILIP1L 542 1.431 - - - - - 0.703 0.728 - - filamin A interacting protein 1-like
45. wu:fd44f01 wu:fd44f01 391 1.431 - - - - - 0.718 0.713 - -
46. mab21l1 ENSDARG00000102047 4665 1.416 - - - 0.710 - - 0.706 - - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
47. zic5 ENSDARG00000016022 1034 1.413 - - - 0.705 - 0.708 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
48. CABZ01066957.1 CABZ01066957.1 161 1.412 - 0.700 - - - 0.712 - - -
49. macrod1 ENSDARG00000029609 66 0.965 - 0.965 - - - - - - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
50. gpr133 gpr133 83 0.959 - - - - - 0.959 - - -
51. C9H2orf69 C9H2orf69 148 0.947 - - - - - 0.947 - - -
52. naif1 ENSDARG00000062753 176 0.947 - - - - - 0.947 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
53. VWA7 ENSDARG00000061462 816 0.943 - - - - - 0.943 - - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
54. nrsn1 ENSDARG00000111235 123 0.936 - - - - - 0.936 - - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
55. tmem5 1630 0.935 - - - - - 0.935 - - - transmembrane protein 5
56. kif18a ENSDARG00000008022 546 0.931 - - - - - 0.931 - - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
57. C8H1orf194 C8H1orf194 111 0.931 - - - - - 0.931 - - -
58. MICU3_1 MICU3_1 51 0.93 - - - - - 0.930 - - -
59. zgc:113294 ENSDARG00000032285 132 0.928 - - - - - 0.928 - - - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
60. FAM126B 588 0.928 - - - - - 0.928 - - - family with sequence similarity 126 member B
61. BX470131.1 BX470131.1 86 0.928 - - - - - 0.928 - - -
62. fbxw4 ENSDARG00000033551 645 0.927 - - - - - 0.927 - - - F-box and WD repeat domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-000516-1]
63. adck1 ENSDARG00000062561 22 0.925 - - - - - 0.925 - - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
64. slc46a1 ENSDARG00000026149 297 0.922 - - - - - 0.922 - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
65. si:ch211-133l11.10 ENSDARG00000005626 381 0.921 - - - - - 0.921 - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
66. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.921 - - - - - 0.921 - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
67. si:ch211-163b2.4 ENSDARG00000094890 140 0.918 - - - - - 0.918 - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
68. RAPH1 RAPH1 294 0.917 - - - - - 0.917 - - -
69. zgc:65895 ENSDARG00000034086 1258 0.917 - - - - - 0.917 - - - zgc:65895 [Source:ZFIN;Acc:ZDB-GENE-040426-1466]
70. abhd14a ENSDARG00000058367 546 0.916 - - - - - 0.916 - - - abhydrolase domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-040426-2428]
71. si:ch211-215p11.4 si:ch211-215p11.4 67 0.916 - - - - - 0.916 - - -
72. chfr ENSDARG00000075347 664 0.915 - 0.915 - - - - - - - checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-3522]
73. slc25a21 ENSDARG00000060564 344 0.913 - - - - - 0.913 - - - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
74. pan2 ENSDARG00000074675 641 0.912 - - - - - 0.912 - - - poly(A) specific ribonuclease subunit PAN2 [Source:ZFIN;Acc:ZDB-GENE-030131-3113]
75. mapta ENSDARG00000089314 2038 0.912 - - - - - 0.912 - - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
76. sirt6 ENSDARG00000102963 766 0.911 - 0.911 - - - - - - - sirtuin 6 [Source:ZFIN;Acc:ZDB-GENE-031007-2]
77. PPFIA3 ENSDARG00000077053 310 0.911 - - - - - 0.911 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
78. ykt6 ENSDARG00000038308 473 0.91 - 0.910 - - - - - - - YKT6 v-SNARE homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-733]
79. nrp1b ENSDARG00000027290 170 0.909 - - - - - 0.909 - - - neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]
80. prelid1b ENSDARG00000044169 501 0.908 - - - - - 0.908 - - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
81. AVL9 ENSDARG00000055538 329 0.908 - - - - - 0.908 - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
82. wars2 ENSDARG00000011801 134 0.907 - - - - - 0.907 - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
83. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 0.907 - - - - - 0.907 - - -
84. hecw1 hecw1 241 0.907 - - - - - 0.907 - - -
85. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.906 - - - - - 0.906 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
86. ADCYAP1R1 ADCYAP1R1 118 0.906 - - - - - 0.906 - - -
87. si:ch211-240g9.1 36 0.906 - - - - - 0.906 - - - si:ch211-240g9.1
88. gabpb2a ENSDARG00000007943 1570 0.906 - - - - - 0.906 - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
89. mcm9 ENSDARG00000013528 212 0.906 - - - - - 0.906 - - - minichromosome maintenance 9 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-041014-310]
90. nadl1.2 695 0.905 - - - - - 0.905 - - - neural adhesion molecule L1.2, transcript variant X1
91. nfatc3b ENSDARG00000051729 239 0.905 - - - - - 0.905 - - - nuclear factor of activated T cells 3b [Source:ZFIN;Acc:ZDB-GENE-100922-25]
92. entpd2b ENSDARG00000044795 7 0.905 - - - - - 0.905 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
93. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 0.905 - - - - - 0.905 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
94. MON2 ENSDARG00000099798 2359 0.904 - - - - - 0.904 - - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
95. syt13 ENSDARG00000012306 298 0.904 - - - - - 0.904 - - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
96. hsp70l_1 ENSDARG00000055723 72 0.904 - - - - - 0.904 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
97. C5H3orf30 C5H3orf30 63 0.904 - - - - - 0.904 - - -
98. DSCAML1 ENSDARG00000098057 321 0.904 - - - - - 0.904 - - - Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
99. lrrfip1b ENSDARG00000095170 293 0.903 - - - - - 0.903 - - - leucine rich repeat (in FLII) interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-050208-324]
100. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 0.903 - - - - - 0.903 - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]

There are 1585 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA