Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ints1

Gene Name Gene ID Reads Annotation
ints1 ENSDARG00000100419 1958 integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]










Genes with expression patterns similar to ints1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ints1 ENSDARG00000100419 1958 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
2. dhx9 ENSDARG00000079725 1241 2.458 - 0.786 - - 0.948 - - 0.724 - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
3. arid1ab ENSDARG00000101891 1722 2.384 - - - - 0.933 - 0.739 - 0.712 AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
4. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.26 - - - - - - 0.779 0.767 0.714 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
5. ubl3b ENSDARG00000021556 1210 2.225 0.734 0.709 - - - - 0.782 - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
6. gon4l ENSDARG00000005867 982 1.722 - 0.786 - - 0.936 - - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
7. ddx49 ENSDARG00000012899 1604 1.714 - - - - 0.921 - 0.793 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
8. mier1a ENSDARG00000041072 1690 1.703 - - - - 0.947 - 0.756 - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
9. lztfl1 ENSDARG00000105010 1697 1.698 - - - - 0.930 - 0.768 - - leucine zipper transcription factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-945]
10. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.696 - - - - 0.915 - 0.781 - - ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
11. fzd1 ENSDARG00000106062 1581 1.679 - - - - 0.931 0.748 - - - frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
12. rybpa ENSDARG00000037773 904 1.674 - - - - 0.939 - - - 0.735 RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
13. znf143a ENSDARG00000012887 1393 1.667 - - - - 0.935 - 0.732 - - zinc finger protein 143a [Source:ZFIN;Acc:ZDB-GENE-041114-154]
14. eya3 ENSDARG00000036100 1965 1.664 - - - - 0.907 - 0.757 - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
15. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.659 - - - - 0.912 - 0.747 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
16. CPEB4 CPEB4 3249 1.656 - - - - 0.920 - 0.736 - -
17. foxo3b ENSDARG00000042904 5046 1.655 - - - - 0.848 - 0.807 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
18. ak2 ENSDARG00000005926 7598 1.654 - - - - 0.851 0.803 - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
19. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.654 - - - - 0.926 - 0.728 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
20. pwp2h ENSDARG00000037109 1395 1.654 - - - - 0.934 - - 0.720 - PWP2 periodic tryptophan protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-021031-3]
21. prpf40a ENSDARG00000058467 6565 1.653 - - - - 0.893 - - - 0.760 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
22. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.652 - - - - 0.923 - 0.729 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
23. tcea1 ENSDARG00000003531 2912 1.651 - 0.713 - - 0.938 - - - - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
24. her4.3 ENSDARG00000070770 613 1.65 - - - - 0.940 - - 0.710 - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
25. si:ch211-282k23.2 ENSDARG00000093591 447 1.647 - - - - 0.931 - 0.716 - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
26. utp3 ENSDARG00000056720 922 1.646 - 0.705 - - 0.941 - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
27. alx4a ENSDARG00000088332 895 1.645 - - - - 0.928 0.717 - - - ALX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-070712-3]
28. wdr33 ENSDARG00000018272 4076 1.644 - - - 0.763 0.881 - - - - WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
29. MDC1 ENSDARG00000086764 1851 1.641 - - - - 0.936 0.705 - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
30. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.629 - - - - 0.859 - 0.770 - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
31. gcfc2 ENSDARG00000079020 479 1.629 - - - - 0.926 - 0.703 - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
32. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 1.618 - - - - 0.917 0.701 - - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
33. GABARAP GABARAP 8341 1.606 - - - - 0.828 - 0.778 - -
34. idh3a ENSDARG00000030278 2983 1.597 - - - - 0.885 - 0.712 - - isocitrate dehydrogenase 3 (NAD+) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1007]
35. npm1b ENSDARG00000037675 5448 1.595 - - - - 0.806 - 0.789 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
36. tgif1 ENSDARG00000059337 4020 1.59 - - - - - - 0.737 - 0.853 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
37. bmpr2a ENSDARG00000011941 2972 1.585 - - - - - - 0.795 - 0.790 bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
38. pbx2 ENSDARG00000019717 6892 1.584 - - - - 0.867 - 0.717 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
39. timm8b ENSDARG00000055708 7291 1.578 - - - - 0.765 - 0.813 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
40. cdk2 ENSDARG00000026577 2835 1.578 - - - - - 0.853 0.725 - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
41. CU570976.1 ENSDARG00000097183 341 1.577 - 0.793 - - - - 0.784 - -
42. snrpb ENSDARG00000011125 11729 1.575 - - - - 0.868 - 0.707 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
43. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.575 - - - - 0.874 - 0.701 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
44. nop16 ENSDARG00000044402 3645 1.567 - - - - 0.840 - 0.727 - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
45. nop58 ENSDARG00000104353 8497 1.561 - - - - - - 0.834 - 0.727 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
46. nol11 ENSDARG00000026767 2528 1.56 0.777 - - - - - 0.783 - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
47. setdb1b ENSDARG00000099021 2937 1.541 - - - 0.783 - - - 0.758 - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
48. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.533 - 0.732 - - - - 0.801 - -
49. arhgef2 ENSDARG00000075819 2173 1.53 - - - - - - - 0.818 0.712 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
50. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 1.524 - - - - - - 0.794 0.730 - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
51. cnp_1 ENSDARG00000070822 249 1.517 - 0.712 - - - - 0.805 - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
52. snrpf ENSDARG00000105037 10241 1.515 - - - - 0.746 - 0.769 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
53. ldb1a ENSDARG00000010137 3035 1.509 - - - - - - - 0.800 0.709 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
54. dnmt3b dnmt3b 2522 1.503 - - - - - - 0.760 - 0.743
55. cdk6 ENSDARG00000070228 1778 1.499 - - - - - - 0.731 0.768 - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
56. hoxb10a ENSDARG00000011579 2135 1.496 - 0.709 - - - - 0.787 - - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
57. tcf7l1b ENSDARG00000007369 2785 1.496 - 0.705 - - - - 0.791 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
58. CBFA2T3 ENSDARG00000079012 6799 1.494 - - - - 0.789 - 0.705 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
59. slc7a6os ENSDARG00000010596 1599 1.49 - 0.784 - - - - 0.706 - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
60. ddx19 ENSDARG00000005699 4602 1.489 - - - - - - 0.738 - 0.751 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
61. smfn ENSDARG00000009806 1280 1.485 0.721 - - - - - 0.764 - - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
62. h3f3a 66671 1.476 - - - - - - 0.739 0.737 - H3 histone, family 3A, transcript variant X1
63. snx27a ENSDARG00000033804 2249 1.476 - 0.701 - - - - 0.775 - - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
64. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.472 - - - - - - 0.730 - 0.742 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
65. rrs1 ENSDARG00000003941 1257 1.472 - 0.734 - - - - - 0.738 - RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-9345]
66. slc25a32a ENSDARG00000089791 511 1.47 - 0.755 - - - - 0.715 - - solute carrier family 25 (mitochondrial folate carrier), member 32a [Source:ZFIN;Acc:ZDB-GENE-040426-758]
67. hdac8 ENSDARG00000003021, ENSDARG00000105159 1729 1.47 - - - - - - 0.740 - 0.730 histone deacetylase 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2772]
68. usp44 ENSDARG00000089861 1532 1.467 - 0.735 - - - - 0.732 - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
69. lbr ENSDARG00000014013 4835 1.466 - - - 0.752 - - - - 0.714 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
70. foxk2 ENSDARG00000030583 2982 1.465 - - - - - - 0.730 0.735 - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
71. trnau1apa ENSDARG00000101323 911 1.465 - - - - - 0.710 0.755 - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
72. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.463 - 0.703 - - 0.760 - - - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
73. marcksa ENSDARG00000004049 2518 1.456 - - - - - - - 0.732 0.724 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
74. foxp1b ENSDARG00000014181 2594 1.454 - 0.710 - - - - 0.744 - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
75. PPP1R8 PPP1R8 1897 1.453 - - - - - 0.712 0.741 - -
76. prnprs3 ENSDARG00000003705 1854 1.452 - 0.738 - - - - 0.714 - - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
77. coe2 coe2 1633 1.448 - - - - - - 0.737 0.711 -
78. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 1.446 - 0.709 - - - - 0.737 - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
79. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 1.443 - 0.727 - - - - 0.716 - - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
80. acap3a ENSDARG00000075990 9652 1.442 - - - - 0.715 - 0.727 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
81. HNRNPA2B1 HNRNPA2B1 14997 1.439 - - - 0.722 - - 0.717 - -
82. sumo3a ENSDARG00000028119 13447 1.436 - - - - - - 0.725 - 0.711 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
83. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.433 - 0.706 - - - - - - 0.727 transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
84. POLD4 POLD4 626 1.433 - 0.728 - - - - - 0.705 -
85. gpsm1a ENSDARG00000092517 784 1.425 - - - - - - - 0.701 0.724 G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
86. psmd1 ENSDARG00000003189 4373 1.424 - - - 0.700 - 0.724 - - - proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
87. NAV2 NAV2 538 1.424 - 0.703 - - - - - 0.721 -
88. msl2a ENSDARG00000038909 1357 1.416 - - 0.708 - - - - - 0.708 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
89. GPN1 ENSDARG00000043928 566 1.416 - - - - - - 0.700 0.716 - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
90. CABZ01003826.1_1 CABZ01003826.1_1 1154 0.956 - - - - 0.956 - - - -
91. zgc:92664 ENSDARG00000015161 1651 0.956 - - - - 0.956 - - - - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
92. usf2 ENSDARG00000020228 2667 0.953 - - - - 0.953 - - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
93. ncaph2 ENSDARG00000033757 1042 0.949 - - - - 0.949 - - - - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
94. ccnb1 ENSDARG00000051923 3226 0.945 - - - - 0.945 - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
95. brd7 ENSDARG00000008380 3654 0.944 - - - - 0.944 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
96. hmga2 ENSDARG00000069912 20402 0.944 - - - - 0.944 - - - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
97. phf16 phf16 1116 0.943 - - - - 0.943 - - - -
98. gnao1a ENSDARG00000016676 8184 0.943 - - - - 0.943 - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
99. setd8a 2549 0.942 - - - - 0.942 - - - - SET domain containing (lysine methyltransferase) 8a
100. cdan1 ENSDARG00000042261 658 0.942 - - - - 0.942 - - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]

There are 1370 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA