Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for im:7140055

Gene Name Gene ID Reads Annotation
im:7140055 ENSDARG00000092181 450 im:7140055 [Source:ZFIN;Acc:ZDB-GENE-041111-101]










Genes with expression patterns similar to im:7140055

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. im:7140055 ENSDARG00000092181 450 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 im:7140055 [Source:ZFIN;Acc:ZDB-GENE-041111-101]
2. trim36 ENSDARG00000062794 785 2.264 0.799 - - - - 0.731 0.734 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
3. AL929239.1 AL929239.1 54 1.672 - - - - - 0.862 0.810 - -
4. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.663 - - - - - 0.817 0.846 - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
5. ccdc153 ENSDARG00000077161 93 1.658 - - - - - 0.800 0.858 - - coiled-coil domain containing 153 [Source:ZFIN;Acc:ZDB-GENE-080204-16]
6. cadpsb ENSDARG00000070567 458 1.636 - - - - - 0.842 0.794 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
7. ncam1b ENSDARG00000007220 233 1.635 - - - - - 0.854 0.781 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
8. sema3fa ENSDARG00000011163 759 1.63 0.859 - - - - 0.771 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
9. cuedc1a ENSDARG00000068716 232 1.617 - - - - - 0.830 0.787 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
10. scn1bb ENSDARG00000105003 239 1.598 - - - - - 0.849 0.749 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
11. sec22c ENSDARG00000063387 203 1.598 - - - - - 0.760 0.838 - - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
12. scn2b ENSDARG00000101713 796 1.597 - - - - - 0.837 0.760 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
13. fam219ab ENSDARG00000013813 591 1.577 0.865 - - - - - 0.712 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
14. PDZD4 ENSDARG00000090564 131 1.573 - - - - - 0.781 0.792 - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
15. CABZ01073654.1 CABZ01073654.1 16 1.572 0.790 - - - - 0.782 - - -
16. rac3a ENSDARG00000090062 394 1.564 - - - - - 0.851 0.713 - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
17. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.553 - - - - - 0.723 0.830 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
18. TUSC3 ENSDARG00000078854 1021 1.551 - - - - - 0.762 0.789 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
19. si:rp71-80o10.4 ENSDARG00000094316 279 1.55 0.813 0.737 - - - - - - - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
20. odz4 odz4 822 1.546 - - - - - 0.763 - 0.783 -
21. NPTXR NPTXR 241 1.545 - - - - - 0.818 0.727 - -
22. ripply1 ENSDARG00000054103 367 1.545 0.754 0.791 - - - - - - - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
23. tmem178b ENSDARG00000006747 173 1.544 - - - - - 0.791 0.753 - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
24. PPP1R9B PPP1R9B 855 1.539 - - - - - 0.824 0.715 - -
25. prdm13 ENSDARG00000078701 205 1.529 - - - - - 0.825 0.704 - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
26. si:dkey-253a1.2 si:dkey-253a1.2 52 1.523 - - - - - 0.806 0.717 - -
27. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.52 - - - - - 0.808 0.712 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
28. pou4f1 ENSDARG00000005559 821 1.52 - - - - - 0.780 0.740 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
29. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 1.518 0.736 0.782 - - - - - - - SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
30. runx1t1 ENSDARG00000003680 633 1.516 - - - 0.740 - 0.776 - - - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
31. gng3 ENSDARG00000009553 2530 1.509 - - - - - 0.762 0.747 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
32. bhlhe22 ENSDARG00000058039 1673 1.508 - - - - - 0.788 0.720 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
33. grin1a ENSDARG00000027828 1327 1.505 - - - - - 0.737 0.768 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
34. GPALPP1 ENSDARG00000058287 1858 1.502 0.779 - - - - - - 0.723 - GPALPP motifs containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-212]
35. AL954372.1_1 ENSDARG00000112499 57 1.501 - 0.709 - - - 0.792 - - -
36. ankrd46b ENSDARG00000015780 213 1.494 - - - - - 0.766 0.728 - - ankyrin repeat domain 46b [Source:ZFIN;Acc:ZDB-GENE-050114-7]
37. KCTD5 KCTD5 109 1.491 - - - - - 0.788 0.703 - -
38. dpysl5b ENSDARG00000059311 600 1.486 - - - - - 0.764 0.722 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
39. BRINP3 BRINP3 11 1.486 - - - - - 0.782 0.704 - -
40. pou3f3a ENSDARG00000042032 2835 1.478 - 0.713 - - - - 0.765 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
41. slc8a2b ENSDARG00000100592 598 1.475 - - - - - 0.765 0.710 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
42. CR847998.1 ENSDARG00000104784 518 1.475 - - - - - 0.750 0.725 - -
43. gnb1b ENSDARG00000104372 1077 1.474 0.707 0.767 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
44. sall3b ENSDARG00000057586 982 1.468 - - - - - 0.722 0.746 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
45. cspg5a ENSDARG00000069981 1699 1.467 - - - - - 0.734 0.733 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
46. SKOR2 SKOR2 1041 1.464 - - - - - 0.763 0.701 - -
47. cadm1b ENSDARG00000042677 277 1.463 - - - - - 0.707 0.756 - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
48. lhx1a ENSDARG00000014018 958 1.46 - - - - - 0.745 0.715 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
49. ADAM22 ENSDARG00000060532 2259 1.452 - 0.712 - - - - - 0.740 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
50. ckbb ENSDARG00000043257 3503 1.451 - - - - - 0.708 0.743 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
51. mapk10 ENSDARG00000102730 108 1.451 - - - - - 0.721 0.730 - - mitogen-activated protein kinase 10 [Source:ZFIN;Acc:ZDB-GENE-051120-117]
52. dtnbp1b ENSDARG00000055206 64 1.45 - - - - - 0.706 0.744 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
53. dbx2 2971 1.446 - - - - - 0.714 0.732 - - developing brain homeobox 2
54. socs6b ENSDARG00000015863 1799 1.443 - - - 0.723 - 0.720 - - - suppressor of cytokine signaling 6b [Source:ZFIN;Acc:ZDB-GENE-030131-1670]
55. clstn1 ENSDARG00000031720 5286 1.441 - - - - - 0.706 0.735 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
56. ntrk2a ENSDARG00000059897 185 1.439 - - - - - 0.734 0.705 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
57. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.436 - - - - - 0.703 0.733 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
58. clstn3 ENSDARG00000073883 590 1.428 - - - - - 0.721 0.707 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
59. BAALC 250 1.426 - - - - - 0.709 0.717 - - brain and acute leukemia, cytoplasmic
60. APBB3 ENSDARG00000053771 654 1.425 - - - - - 0.704 0.721 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
61. plekha3 ENSDARG00000056601 213 0.922 0.922 - - - - - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1252]
62. CU234171.2 CU234171.2 86 0.913 - - - - - 0.913 - - -
63. dclk2 dclk2 719 0.908 - - - - - - 0.908 - -
64. kirrel3l ENSDARG00000104665 499 0.904 - - - - - 0.904 - - - kirre like nephrin family adhesion molecule 3, like [Source:ZFIN;Acc:ZDB-GENE-070831-1]
65. LRFN5_1 LRFN5_1 96 0.901 - - - - - 0.901 - - -
66. clul1 ENSDARG00000055595 103 0.901 - - - - - - 0.901 - - clusterin-like 1 (retinal) [Source:ZFIN;Acc:ZDB-GENE-031118-57]
67. arl9 ENSDARG00000071881 403 0.899 - 0.899 - - - - - - - ADP-ribosylation factor-like 9 [Source:ZFIN;Acc:ZDB-GENE-060825-210]
68. CU571169.5 CU571169.5 353 0.898 - - - - - 0.898 - - -
69. GPR35 GPR35 32 0.897 - - - - - 0.897 - - -
70. MICU3_1 MICU3_1 51 0.896 - - - - - - 0.896 - -
71. bdnf ENSDARG00000018817 193 0.892 - - - - - 0.892 - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
72. erbb4a ENSDARG00000063207 55 0.889 - - - - - 0.889 - - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
73. RSF1 RSF1 1242 0.889 - - - - - 0.889 - - -
74. gfra1b ENSDARG00000102564 821 0.886 - - - - - - 0.886 - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
75. ATP6AP1L_1 ATP6AP1L_1 508 0.885 - - - - - 0.885 - - -
76. si:ch211-254n4.1 si:ch211-254n4.1 36 0.883 - - - - - 0.883 - - -
77. zgc:174160 484 0.881 0.881 - - - - - - - - zgc:174160, transcript variant X1
78. capn1b ENSDARG00000052748, ENSDARG00000117045 320 0.873 - - - - - 0.873 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
79. mibp_1 ENSDARG00000101362 193 0.869 - - - - - - 0.869 - - muscle-specific beta 1 integrin binding protein [Source:ZFIN;Acc:ZDB-GENE-030404-1]
80. dlg2 ENSDARG00000099323 162 0.868 - - - - - 0.868 - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
81. si:dkey-122c11.9 si:dkey-122c11.9 227 0.868 - - - - - 0.868 - - -
82. TMEM151A ENSDARG00000077986 78 0.868 - - - - - 0.868 - - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
83. diras1a ENSDARG00000028066 126 0.866 - - - - - 0.866 - - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
84. emp1 ENSDARG00000069632 251 0.866 - - - - - - 0.866 - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
85. bai3 bai3 92 0.865 - - - - - 0.865 - - -
86. BX957322.2 ENSDARG00000095302 68 0.864 - - - - - 0.864 - - -
87. tmem68 ENSDARG00000086737 209 0.863 - - - - - 0.863 - - - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
88. SLC37A4 SLC37A4 10 0.862 - - - - - 0.862 - - -
89. sh3glb2a ENSDARG00000008983 452 0.86 - - - - - 0.860 - - - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
90. si:ch211-134c9.2 ENSDARG00000095593 86 0.859 0.859 - - - - - - - - si:ch211-134c9.2 [Source:ZFIN;Acc:ZDB-GENE-090312-73]
91. adra2c ENSDARG00000069669, ENSDARG00000109788, ENSDARG00000110072 61 0.858 - - - - - 0.858 - - - adrenoceptor alpha 2C [Source:ZFIN;Acc:ZDB-GENE-021010-3]
92. tnfrsf21 ENSDARG00000001807 239 0.858 - 0.858 - - - - - - - tumor necrosis factor receptor superfamily, member 21 [Source:ZFIN;Acc:ZDB-GENE-030131-5971]
93. bloc1s4 ENSDARG00000007597 365 0.857 0.857 - - - - - - - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [Source:ZFIN;Acc:ZDB-GENE-040801-215]
94. dab2ipa ENSDARG00000069484 1138 0.856 - 0.856 - - - - - - - DAB2 interacting protein a [Source:ZFIN;Acc:ZDB-GENE-081104-516]
95. si:ch211-67e16.11 ENSDARG00000095580 635 0.856 0.856 - - - - - - - - si:ch211-67e16.11 [Source:ZFIN;Acc:ZDB-GENE-030131-7044]
96. TMEM216 ENSDARG00000091576 357 0.855 0.855 - - - - - - - - transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]
97. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.854 - - - - - - 0.854 - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
98. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 0.854 - - - - - - 0.854 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
99. rem1 ENSDARG00000020544 87 0.854 - - - - - - 0.854 - - RAS (RAD and GEM)-like GTP-binding 1 [Source:ZFIN;Acc:ZDB-GENE-040317-1]
100. kcna1 kcna1 174 0.854 - - - - - - 0.854 - -

There are 1109 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA