Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ilf3b

Gene Name Gene ID Reads Annotation
ilf3b ENSDARG00000105177 9473 interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]










Genes with expression patterns similar to ilf3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ilf3b ENSDARG00000105177 9473 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
2. wu:fq41a10 wu:fq41a10 7009 3.2 - - 0.857 0.742 - - 0.787 - 0.814
3. top1l ENSDARG00000070545 40529 3.13 - - 0.709 0.771 - - 0.810 0.840 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
4. snrpe ENSDARG00000033175 7462 3.126 - - - - - 0.765 0.723 0.777 0.861 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
5. IM:7163548 IM:7163548 6540 3.07 - 0.827 - 0.706 - 0.761 0.776 - -
6. znf292b ENSDARG00000043973 3791 3.051 - - 0.777 0.752 - 0.788 0.734 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
7. marcksa ENSDARG00000004049 2518 2.453 - - - - - 0.808 0.803 0.842 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
8. mta2 ENSDARG00000013031 2932 2.442 - - - 0.774 - - 0.823 0.845 - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
9. arnt2 ENSDARG00000103697 5731 2.433 - - - - - 0.768 0.821 0.844 - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
10. hnrnpub ENSDARG00000004735 16496 2.366 - - - 0.744 - - 0.870 0.752 - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
11. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.349 - - 0.866 - 0.774 - 0.709 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
12. tubb5 ENSDARG00000037997 18691 2.346 - - 0.856 0.760 - - 0.730 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
13. TAF15 ENSDARG00000070019 5102 2.341 - - - 0.704 - - 0.751 0.886 - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
14. setb ENSDARG00000003920 21788 2.337 - - - - - 0.795 0.841 0.701 - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
15. HNRNPA2B1 HNRNPA2B1 14997 2.324 - - - 0.729 - - 0.823 0.772 -
16. cpsf3 ENSDARG00000027649 6897 2.319 - 0.793 - 0.726 - - - - 0.800 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
17. smarce1 ENSDARG00000016871 9628 2.313 - - - 0.762 - - 0.799 0.752 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
18. aspm ENSDARG00000103754 5708 2.307 - - - 0.736 - - 0.758 - 0.813 abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
19. zgc:91910 ENSDARG00000035678 6172 2.294 - 0.817 - - - - 0.747 0.730 - zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
20. rbm4.3 ENSDARG00000022129 28571 2.286 - - 0.706 - - - - 0.823 0.757 RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
21. nxf1 ENSDARG00000055076 3251 2.275 - 0.824 0.717 - - - 0.734 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
22. pygo2 ENSDARG00000036772 2510 2.272 - - - - - 0.779 0.728 0.765 - pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
23. hnrnpk ENSDARG00000018914 8841 2.27 - - - - - - 0.802 0.707 0.761 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
24. fam60al 2846 2.259 - - - 0.751 - - 0.713 0.795 - family with sequence similarity 60, member A, like
25. meaf6 ENSDARG00000101216 6865 2.243 - - - 0.703 - - 0.781 0.759 - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
26. CCDC71 CCDC71 2442 2.232 - - - - - - 0.803 0.704 0.725
27. DTX4 ENSDARG00000076302 2642 2.228 - - - - - - 0.712 0.746 0.770 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
28. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.218 - - 0.710 - 0.750 - 0.758 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
29. magoh ENSDARG00000038635, ENSDARG00000109837 2880 2.213 - - - - - 0.710 0.765 0.738 - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
30. cxcr4b ENSDARG00000041959 2322 2.172 - - - - - 0.755 0.702 - 0.715 chemokine (C-X-C motif), receptor 4b [Source:ZFIN;Acc:ZDB-GENE-010614-1]
31. ssbp4 ENSDARG00000056483 10196 1.763 - - - - - - 0.863 0.900 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
32. h3f3a 66671 1.73 - - - - - - 0.841 0.889 - H3 histone, family 3A, transcript variant X1
33. ube2i ube2i 13024 1.695 - - - 0.836 - - 0.859 - -
34. khsrp ENSDARG00000026489 15738 1.672 - - 0.848 - - - 0.824 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
35. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.672 - - - - - - - 0.856 0.816 zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
36. KANSL1_1 KANSL1_1 1809 1.67 - 0.957 - - - - - - 0.713
37. hnrpl 6412 1.664 - - - - - 0.727 0.937 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
38. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.655 - - - - - - 0.793 0.862 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
39. CABZ01111990.1 CABZ01111990.1 4374 1.647 - - - - - 0.842 - 0.805 -
40. ptenb ENSDARG00000056623 5783 1.636 - - - - - - 0.731 - 0.905 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
41. dusp8a ENSDARG00000009299 1302 1.633 - - - - - - 0.815 0.818 - dual specificity phosphatase 8a [Source:ZFIN;Acc:ZDB-GENE-040426-1842]
42. ubr5 ENSDARG00000018192 9267 1.632 - - - - - - 0.821 0.811 - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
43. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.629 - - - - - - 0.830 0.799 - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
44. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.628 - - - 0.845 - - - 0.783 - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
45. calm1a ENSDARG00000021811 4791 1.627 - 0.822 - - - - 0.805 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
46. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.621 - - - - - 0.761 0.860 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
47. rcor2 ENSDARG00000008278 1678 1.621 - - - - - - - 0.873 0.748 REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
48. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.62 - - - 0.744 - - 0.876 - - actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
49. ppm1g ENSDARG00000075559 6516 1.62 - - 0.894 0.726 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
50. tcea1 ENSDARG00000003531 2912 1.615 - - - - - - 0.760 0.855 - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
51. arl14ep ENSDARG00000001210 3029 1.611 - - - - - - 0.762 - 0.849 ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
52. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.601 - - - 0.757 - - - 0.844 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
53. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.594 - - - 0.805 - - 0.789 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
54. ube2d1b ENSDARG00000038576 5971 1.594 - 0.882 - - - - - 0.712 - ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
55. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 1.594 - - - - - 0.818 0.776 - - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
56. cpsf6 ENSDARG00000018618 3923 1.585 - - 0.790 - - - 0.795 - - cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
57. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.581 - 0.822 - 0.759 - - - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
58. bri3bp ENSDARG00000010108 6295 1.58 - - 0.791 - - - 0.789 - - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
59. snrpc ENSDARG00000009871 9567 1.578 - - - - - - 0.834 0.744 - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
60. smarca4 smarca4 9726 1.576 - - - 0.841 - - 0.735 - -
61. akirin2 ENSDARG00000058729 13245 1.576 - - - 0.767 - - - 0.809 - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
62. kpna2 ENSDARG00000038066 7954 1.575 - - - 0.776 0.799 - - - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
63. dcaf7 ENSDARG00000054355 3517 1.571 - - - - - 0.762 0.809 - - ddb1 and cul4 associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9511]
64. ssbp3b ENSDARG00000030155 7163 1.568 - - 0.791 - - - 0.777 - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
65. cnn3b ENSDARG00000029856 4807 1.568 - - - - - - 0.823 0.745 - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
66. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.567 - - - - - - - 0.832 0.735
67. hmgb3a ENSDARG00000056725 15668 1.567 - - 0.711 - - - 0.856 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
68. ddx39ab ENSDARG00000015111 11619 1.567 - - - - - 0.701 0.866 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
69. yth2 yth2 3716 1.566 - - - 0.739 - - 0.827 - -
70. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.565 - - - - - - 0.791 0.774 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
71. sumo3a ENSDARG00000028119 13447 1.565 - - - - - - 0.854 0.711 - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
72. dab2ipa ENSDARG00000069484 1138 1.565 - - - - - - 0.803 0.762 - DAB2 interacting protein a [Source:ZFIN;Acc:ZDB-GENE-081104-516]
73. sncb ENSDARG00000104945 8197 1.563 - - - - - - - 0.758 0.805 synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
74. SERBP1 SERBP1 9276 1.56 0.784 - - - - - 0.776 - -
75. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 1.559 - - - - - 0.845 0.714 - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
76. mpnd ENSDARG00000061989 817 1.556 - - - - - 0.823 - - 0.733 MPN domain containing [Source:ZFIN;Acc:ZDB-GENE-060929-1162]
77. whsc1l1 8544 1.554 - - - 0.797 - - - 0.757 - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
78. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.552 - - - - - 0.814 0.738 - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
79. znf865 ENSDARG00000036698 15532 1.551 - - - 0.762 - - 0.789 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
80. mcm4 ENSDARG00000040041 7971 1.545 - - 0.815 - - - 0.730 - - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
81. h2afva ENSDARG00000068820 16427 1.545 - - - 0.744 - - 0.801 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
82. btg2 ENSDARG00000020298 6616 1.544 - - - 0.774 - - 0.770 - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
83. srsf2a ENSDARG00000057484 25721 1.543 - - - 0.809 - - - - 0.734 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
84. cdca8 ENSDARG00000043137 7541 1.543 - - - 0.705 0.838 - - - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
85. apex1 ENSDARG00000045843 6345 1.542 - - - 0.753 - - - 0.789 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
86. ZFHX3 ENSDARG00000103057 7759 1.542 - - - - - - 0.761 0.781 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
87. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.542 - - - 0.768 - - - 0.774 - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
88. rrm1 ENSDARG00000014017 7296 1.541 - - - 0.724 - - 0.817 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
89. hnrnpm ENSDARG00000061735 19428 1.541 - - - 0.824 - - - 0.717 - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
90. eif3g ENSDARG00000016889 10367 1.54 - 0.797 - - - - 0.743 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
91. fubp1 ENSDARG00000029248 15259 1.539 - - - 0.800 - - - 0.739 - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
92. kif22 ENSDARG00000102624 3694 1.539 0.712 - - - - - 0.827 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
93. cdc34b ENSDARG00000012627 3879 1.539 - - - - - - 0.700 0.839 - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
94. RASGRF2 RASGRF2 644 1.538 - - - - - - 0.771 0.767 -
95. fam107b ENSDARG00000026865, ENSDARG00000113209, ENSDARG00000116517 861 1.536 - - - - - - - 0.772 0.764 family with sequence similarity 107, member B [Source:ZFIN;Acc:ZDB-GENE-031030-12]
96. snrpa ENSDARG00000018890 4593 1.536 - - - 0.750 - - - 0.786 - small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
97. mapre1b ENSDARG00000002659 9119 1.536 - 0.794 - - - - - 0.742 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
98. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 1.535 - - - 0.722 - - - 0.813 - activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
99. ctnnb1 ENSDARG00000014571 12004 1.533 - - - 0.728 - - - 0.805 - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
100. asf1bb ENSDARG00000043713 2340 1.533 - - - - - - 0.815 0.718 - anti-silencing function 1Bb histone chaperone [Source:ZFIN;Acc:ZDB-GENE-040426-2594]

There are 1021 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA