Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ilf3a

Gene Name Gene ID Reads Annotation
ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]










Genes with expression patterns similar to ilf3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
2. pcnp ENSDARG00000037713 2754 2.672 - 0.873 - - - - - 0.954 0.845 PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
3. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 2.556 - 0.851 0.726 - - - - 0.979 - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
4. ylpm1 ENSDARG00000043680 7676 2.455 - 0.782 0.888 - - - 0.785 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
5. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.403 - 0.873 - - - - 0.704 - 0.826 chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
6. dnmt3b dnmt3b 2522 2.402 - 0.929 0.762 - - - 0.711 - -
7. SSBP4 ENSDARG00000056483 5156 2.387 - - 0.722 - - - 0.718 0.947 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
8. nucks1b ENSDARG00000012777 4468 2.339 - - 0.744 - - - 0.756 - 0.839 nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
9. elof1 ENSDARG00000099453 6176 2.338 - 0.741 0.796 - - - 0.801 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
10. rnps1 ENSDARG00000116743 9994 2.318 - - 0.769 - - - 0.775 0.774 - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
11. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.265 - - 0.797 - - - 0.722 - 0.746 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
12. gspt1l ENSDARG00000098627 8381 2.256 - 0.802 - 0.727 - - 0.727 - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
13. uba1 ENSDARG00000037559 11579 2.161 - 0.705 - - 0.707 - 0.749 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
14. prelid1b ENSDARG00000044169 501 1.897 - 0.916 - - - - - 0.981 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
15. slc30a9 ENSDARG00000057272 766 1.861 - 0.880 - - - - - 0.981 - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
16. aldh7a1 ENSDARG00000018426 4637 1.829 - 0.889 - - - - - 0.940 - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
17. usp1 ENSDARG00000056414 1816 1.815 - 0.859 - - - - - 0.956 - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
18. coro7 ENSDARG00000089616 2141 1.805 - 0.863 - - - - - 0.942 - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
19. sly1 sly1 2403 1.768 - - - - - - - 0.978 0.790
20. map2k6 ENSDARG00000099184 8741 1.758 - - - - - - - 0.927 0.831 mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
21. slit1a ENSDARG00000044954 3810 1.753 - 0.843 - - - - - 0.910 - slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]
22. AIFM2 ENSDARG00000077549 1419 1.752 - - - - - - - 0.976 0.776 apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
23. qars ENSDARG00000010316 2715 1.737 - - - - - - - 0.970 0.767 glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
24. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.735 - - - - - - - 0.920 0.815 DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
25. KIAA0355 3250 1.721 - 0.925 - - - - - - 0.796 KIAA0355 ortholog, transcript variant X1
26. gins1 ENSDARG00000007624 1421 1.719 - - - - - - - 0.948 0.771 GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
27. siah1 ENSDARG00000030871 1590 1.714 - 0.869 - - - - - - 0.845 siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
28. uck2b ENSDARG00000022213 1542 1.712 - 0.900 - - - - - - 0.812 uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
29. ALDH1L2 ENSDARG00000070230 2550 1.711 - 0.898 - - - - - 0.813 - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
30. CEP350 ENSDARG00000058000 2887 1.707 - 0.875 - - - 0.832 - - - centrosomal protein 350 [Source:ZFIN;Acc:ZDB-GENE-030131-6975]
31. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1.702 - - 0.728 - - - - 0.974 - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
32. pkma ENSDARG00000099730 1314 1.702 - - - - - - 0.788 0.914 - pyruvate kinase M1/2a [Source:ZFIN;Acc:ZDB-GENE-031201-4]
33. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.692 - - - - - - 0.824 - 0.868 heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
34. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.691 - 0.859 - - - - - - 0.832 hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
35. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.686 - - - - - - - 0.853 0.833 eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
36. kansl1a ENSDARG00000090895 2593 1.679 - - 0.738 - - - - 0.941 - KAT8 regulatory NSL complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-121219-5]
37. epha7 ENSDARG00000004635, ENSDARG00000112305 1373 1.673 - - 0.714 - - - - 0.959 - eph receptor A7 [Source:ZFIN;Acc:ZDB-GENE-030131-3745]
38. pebp1 ENSDARG00000042069 6651 1.672 - - - - 0.743 - - 0.929 - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
39. anapc16 ENSDARG00000013822 5857 1.671 - - - - - - - 0.851 0.820 anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
40. NAIF1 ENSDARG00000062753 696 1.665 - 0.870 - - - - - - 0.795 nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
41. TP53BP1 ENSDARG00000079000 997 1.664 - 0.860 - - - - - - 0.804 tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
42. slbp ENSDARG00000100558 3405 1.663 - 0.877 0.786 - - - - - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
43. hoxb10a ENSDARG00000011579 2135 1.663 - - - - - - 0.723 0.940 - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
44. psmb2 ENSDARG00000031511 4016 1.66 - 0.724 - - - - - 0.936 - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
45. ezh2 ENSDARG00000010571 3273 1.66 - - 0.808 - - - 0.852 - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
46. zgc:56095 ENSDARG00000018461 3360 1.657 - 0.747 - - - - - 0.910 - zgc:56095 [Source:ZFIN;Acc:ZDB-GENE-040426-1948]
47. mark3 mark3 1375 1.656 - 0.858 - - - - - - 0.798
48. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 1.654 - 0.900 - - - - 0.754 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
49. CABZ01057013.1 CABZ01057013.1 1308 1.653 - - - - - - 0.738 0.915 -
50. ARHGEF15 ENSDARG00000100293 553 1.648 - 0.844 - - - - - - 0.804 Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
51. nr2f6b ENSDARG00000003165 5855 1.646 - - - - - - 0.730 0.916 - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
52. kmt2bb ENSDARG00000060697 5230 1.645 - - 0.780 - - - - - 0.865 lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
53. clic4 ENSDARG00000022995 6064 1.639 - 0.797 - - - - - - 0.842 chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
54. rqcd1 2301 1.637 - 0.816 - - - - - - 0.821 RCD1 required for cell differentiation1 homolog (S. pombe)
55. rpa2 ENSDARG00000037188 4284 1.629 - - 0.773 - - - - - 0.856 replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
56. map3k7 ENSDARG00000020469 2845 1.629 - 0.772 - - - - - - 0.857 mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
57. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.621 - 0.872 - - - - - - 0.749 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
58. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.619 - - - - - - 0.740 0.879 - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
59. rab5if ENSDARG00000074790 8807 1.613 - - - - - - - 0.830 0.783 RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
60. gipc1 ENSDARG00000104483 2913 1.612 - - 0.759 - - - - - 0.853 GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
61. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.6 - - - - - - 0.717 - 0.883 mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
62. thoc7 ENSDARG00000015394 3824 1.599 - - - - - - 0.738 - 0.861 THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
63. kmt2ba ENSDARG00000062962 1572 1.595 - - - - - - 0.771 - 0.824 lysine (K)-specific methyltransferase 2Ba [Source:ZFIN;Acc:ZDB-GENE-060503-376]
64. ddx18 ENSDARG00000030789 3631 1.595 - 0.861 - - - - 0.734 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-030131-9685]
65. pop5 ENSDARG00000053452 1347 1.592 - 0.862 - - - - 0.730 - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
66. SRGAP3 ENSDARG00000060309 5353 1.589 - - 0.745 - - - - 0.844 - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
67. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.585 - - - - - - 0.731 0.854 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
68. COL4A3BP COL4A3BP 3288 1.584 - 0.867 - - - - 0.717 - -
69. vps35 ENSDARG00000008224 13245 1.584 - - - - - - 0.735 - 0.849 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
70. pdgfra_1 ENSDARG00000070494, ENSDARG00000113952 1996 1.582 - - - - - - 0.780 - 0.802 platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
71. rbb4 rbb4 15541 1.579 - - 0.816 - - - 0.763 - -
72. pou2f1b ENSDARG00000007996 2172 1.574 - 0.865 0.709 - - - - - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
73. bbs4 ENSDARG00000063522 247 1.574 0.734 0.840 - - - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
74. zgc:77262 ENSDARG00000044545 5563 1.573 - - 0.815 - - - 0.758 - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
75. TNPO2 ENSDARG00000042887 2290 1.571 - 0.868 0.703 - - - - - - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
76. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.567 - 0.795 - 0.772 - - - - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
77. CR354611.2 CR354611.2 2040 1.563 - 0.842 - - - - - - 0.721
78. u2af2b ENSDARG00000011740 6946 1.562 - 0.732 0.830 - - - - - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
79. TNRC6A ENSDARG00000079688 14433 1.559 - - 0.761 - - - 0.798 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
80. e2f8 ENSDARG00000057323 1432 1.557 - 0.837 0.720 - - - - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
81. arglu1a ENSDARG00000019223 8716 1.555 - - - - - - 0.783 - 0.772 arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
82. zic2a ENSDARG00000015554 2860 1.552 - - - - - 0.715 - 0.837 - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
83. tpx2 ENSDARG00000078654 8120 1.546 - 0.733 - - - - - - 0.813 TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
84. polr2a ENSDARG00000099966 5706 1.545 - 0.790 0.755 - - - - - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
85. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 1.545 - 0.795 0.750 - - - - - - SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
86. nucb1 ENSDARG00000054833 2009 1.544 - 0.771 - - - - - - 0.773 nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
87. kdm1a ENSDARG00000060679 6152 1.544 - - - 0.796 - - 0.748 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
88. eif5b ENSDARG00000016548 3972 1.544 - - 0.745 - - - 0.799 - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
89. drap1 ENSDARG00000041203 6749 1.54 - - 0.709 - - - - - 0.831 DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
90. cnpy1 ENSDARG00000003757 1132 1.539 - 0.775 - - - - - - 0.764 canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
91. sumo3b ENSDARG00000035993 3414 1.539 - 0.818 - - - - 0.721 - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
92. trim33 ENSDARG00000016181 1718 1.538 - - - - - - 0.726 - 0.812 tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
93. lsm6 ENSDARG00000036995 4377 1.537 - 0.706 - - - - - - 0.831 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
94. nolc1 ENSDARG00000024561 3457 1.537 - - 0.763 - - - 0.774 - - nucleolar and coiled-body phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6349]
95. smarce1 ENSDARG00000016871 9628 1.537 - - - 0.726 - - 0.811 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
96. nova1 ENSDARG00000020178 4129 1.536 - - - 0.705 - - - - 0.831 neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
97. znf292b ENSDARG00000043973 3791 1.536 - 0.744 - - - - 0.792 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
98. ptgs2a ENSDARG00000004539 1207 1.534 - 0.791 - - - - - - 0.743 prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
99. CCNA2 ENSDARG00000011094 3996 1.531 - - 0.829 - - 0.702 - - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
100. carm1 ENSDARG00000018698 5599 1.53 - - - 0.720 - 0.810 - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]

There are 1413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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