Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ik

Gene Name Gene ID Reads Annotation
ik ENSDARG00000004161 3132 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]










Genes with expression patterns similar to ik

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ik ENSDARG00000004161 3132 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
2. eif2ak3 ENSDARG00000062139 3276 2.919 - 0.964 1.000 - - - 0.955 - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
3. ABI3_1 ABI3_1 511 2.857 - 0.986 - - - 0.914 0.957 - -
4. kansl3 ENSDARG00000029556 2487 2.659 - 0.975 - 0.708 - - 0.976 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
5. erh ENSDARG00000032866 20633 2.634 - - 0.960 - - 0.815 0.859 - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
6. rbm34 ENSDARG00000101877 1573 2.613 - - - 0.734 - 0.942 - - 0.937 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
7. TAF2 ENSDARG00000102307 1401 2.603 - - - 0.705 - - 0.966 - 0.932 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
8. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 2.586 - - - - - 0.960 - 0.739 0.887 abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
9. uqcc uqcc 4742 2.552 - 0.981 - - - 0.757 0.814 - -
10. alox12 ENSDARG00000069463 5787 2.427 - 0.878 - - - 0.831 0.718 - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
11. INO80B ENSDARG00000062749 844 2.34 0.722 - - 0.714 - 0.904 - - - INO80 complex subunit B [Source:ZFIN;Acc:ZDB-GENE-061013-69]
12. kdm5c ENSDARG00000006124 4389 2.14 0.718 - - 0.702 - - - - 0.720 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
13. mrpl12 ENSDARG00000038768 5539 1.953 - - 0.999 - - - 0.954 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
14. ube2e1 ENSDARG00000116649 10656 1.95 - - 0.995 - - - 0.955 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
15. dnajb9a ENSDARG00000052072 578 1.947 - - - - - 0.967 0.980 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
16. CABZ01084815.1 CABZ01084815.1 351 1.937 - - - - - 0.971 0.966 - -
17. cux1b ENSDARG00000043134 641 1.934 - - - - - 0.950 0.984 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
18. creb3l1 ENSDARG00000015793 1988 1.934 - 0.962 - - - - 0.972 - - cAMP responsive element binding protein 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-030219-181]
19. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 1.93 - - 0.998 - - - 0.932 - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
20. CACHD1 ENSDARG00000061590 1287 1.93 - - - - - 0.951 0.979 - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
21. acn9 acn9 520 1.917 - - - - - 0.937 0.980 - -
22. zgc:163030 ENSDARG00000069192 2963 1.915 - - - - - 0.959 0.956 - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
23. TMEM184B TMEM184B 1280 1.904 - - - - - 0.925 0.979 - -
24. mrpl24 ENSDARG00000019222 798 1.903 - - - - - 0.933 0.970 - - mitochondrial ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-040718-98]
25. chchd6a ENSDARG00000003206 421 1.902 - 0.980 - - - 0.922 - - - coiled-coil-helix-coiled-coil-helix domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-040930-2]
26. st8sia2 ENSDARG00000018788 2183 1.902 - 0.981 - - - - - - 0.921 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
27. purba ENSDARG00000068822 2537 1.896 - 0.939 - - - - 0.957 - - purine-rich element binding protein Ba [Source:ZFIN;Acc:ZDB-GENE-060531-100]
28. fbn2b ENSDARG00000098237 10835 1.895 - 0.897 0.998 - - - - - - fibrillin 2b [Source:ZFIN;Acc:ZDB-GENE-090112-3]
29. shroom4 ENSDARG00000079900 1852 1.893 - 0.948 - - - - 0.945 - - shroom family member 4 [Source:ZFIN;Acc:ZDB-GENE-041111-246]
30. chst11 ENSDARG00000034375 2701 1.893 - 0.946 - - - - 0.947 - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
31. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.892 - - - - - - 0.984 - 0.908 RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
32. gbas gbas 735 1.889 - - - - - 0.910 0.979 - -
33. dhdds ENSDARG00000039851 1135 1.883 - - - - - - 0.974 - 0.909 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
34. tfam ENSDARG00000063145 4524 1.882 - - - - - 0.908 0.974 - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
35. celsr1a ENSDARG00000069185 1894 1.88 - 0.944 - - - - 0.936 - - cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
36. UBL4A UBL4A 1115 1.878 - 0.982 - - - - - - 0.896
37. ttc1 ENSDARG00000044567 1141 1.871 - - - - - - 0.967 - 0.904 tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
38. grk5 ENSDARG00000032801 490 1.87 - - - - - 0.907 0.963 - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
39. ifrd1 ENSDARG00000068708 2858 1.868 - - - - - - 0.949 - 0.919 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
40. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.865 - - - - - 0.915 0.950 - - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
41. lamb4 ENSDARG00000039133 1220 1.863 - - - - - 0.920 0.943 - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
42. ngly1 ENSDARG00000003205 733 1.862 - - - - - 0.967 - - 0.895 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
43. derl1 ENSDARG00000021905 4698 1.861 - 0.962 - - - - - - 0.899 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
44. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.859 - - - - - 0.946 0.913 - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
45. smurf1 ENSDARG00000016086 878 1.857 - - - - - - 0.976 - 0.881 SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
46. FBXW12 FBXW12 658 1.854 - 0.986 - - - 0.868 - - -
47. cldnf ENSDARG00000043133 1006 1.853 - 0.909 - - - 0.944 - - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
48. pes ENSDARG00000018902 3286 1.851 - - - - - - 0.977 - 0.874 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
49. mcts1 ENSDARG00000025972 4662 1.847 - 0.966 - - - - - - 0.881 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
50. cpsf1 ENSDARG00000034178 2036 1.841 - - - - - - 0.975 - 0.866 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
51. fam222ba ENSDARG00000059886 1648 1.84 - 0.981 - - - - - - 0.859 family with sequence similarity 222, member Ba [Source:ZFIN;Acc:ZDB-GENE-060526-355]
52. srek1ip1 ENSDARG00000043728 985 1.839 - - - - - 0.903 - - 0.936 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
53. safb ENSDARG00000020467 5608 1.838 - - - - - 0.873 0.965 - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
54. dhrs13a.2 ENSDARG00000111240 491 1.838 - - - - - 0.962 - - 0.876 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
55. prim1 ENSDARG00000040163 909 1.833 - - - 0.853 - - 0.980 - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
56. otub1b ENSDARG00000011462 4329 1.832 - 0.966 - - - - - - 0.866 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
57. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.831 - - 0.995 - - 0.836 - - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
58. gpr143 ENSDARG00000034572 559 1.828 - - - - - 0.916 - - 0.912 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
59. rwdd ENSDARG00000068256 964 1.828 - - - - - 0.972 - - 0.856 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
60. tmed4 ENSDARG00000024954 3476 1.822 - - - - - 0.873 0.949 - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
61. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.816 - - 1.000 - - - 0.816 - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
62. bcar1 ENSDARG00000056525 6563 1.811 - 0.949 - - - 0.862 - - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
63. adipor1b ENSDARG00000042717 1348 1.81 - - - - - 0.840 0.970 - - adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
64. mmp16a 1128 1.809 - - - - - - 0.899 - 0.910 matrix metallopeptidase 16a (membrane-inserted)
65. nod2 ENSDARG00000010756 294 1.809 - - - - - 0.924 - - 0.885 nucleotide-binding oligomerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061108-4]
66. gde1 ENSDARG00000055108, ENSDARG00000110855 1261 1.807 - - - - - - 0.934 - 0.873 glycerophosphodiester phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-881]
67. gale ENSDARG00000002401 5489 1.805 - 0.922 - - - 0.883 - - - UDP-galactose-4-epimerase [Source:ZFIN;Acc:ZDB-GENE-060421-6479]
68. si:rp71-61h23.4 1921 1.803 - 0.946 - - - - - - 0.857 si:rp71-61h23.4
69. atl3 ENSDARG00000004270 2806 1.802 - - - - - 0.868 0.934 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
70. supt4h1 ENSDARG00000113969 1024 1.8 - - - 0.830 - - 0.970 - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
71. c1galt1c1 ENSDARG00000036335 1623 1.8 - 0.941 - - - 0.859 - - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
72. pex13 ENSDARG00000071037 738 1.796 - - - - - 0.957 - - 0.839 peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
73. laptm4a ENSDARG00000006397 1698 1.794 - - - - - 0.813 0.981 - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
74. nfkbiaa ENSDARG00000005481 948 1.794 - 0.978 - - - 0.816 - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-2227]
75. TRIP10 TRIP10 1079 1.794 - - - - - 0.891 - - 0.903
76. srrm2 ENSDARG00000037965 1967 1.792 - - - 0.813 - - 0.979 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
77. ndufa6 ENSDARG00000038028 2653 1.787 - - - - - - 0.937 - 0.850 NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
78. gid8b ENSDARG00000037589 2121 1.786 - - - - - 0.868 - - 0.918 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
79. NBEAL1 ENSDARG00000099547 1112 1.786 - - - - - 0.818 0.968 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
80. dcaf13 ENSDARG00000002267 2435 1.786 - 0.894 - - - - - - 0.892 ddb1 and cul4 associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-703]
81. mxd3 ENSDARG00000098350 3040 1.785 - 0.961 - - - 0.824 - - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
82. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.783 - - - - - 0.931 - - 0.852 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
83. scinlb ENSDARG00000058348 1466 1.782 - - - - - 0.844 0.938 - - scinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
84. tmem203 ENSDARG00000104996 1182 1.782 - - - - - 0.806 0.976 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
85. nrp1a ENSDARG00000102153 4154 1.779 - 0.973 - - - - - - 0.806 neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
86. sigmar1 ENSDARG00000011418 1240 1.775 - - - - - 0.795 0.980 - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
87. prkcda ENSDARG00000009208 1508 1.769 - - - - - 0.887 0.882 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
88. psmd7 ENSDARG00000102417 4732 1.762 - - - - - 0.856 0.906 - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
89. mycb ENSDARG00000007241 3988 1.759 - 0.837 - - - - 0.922 - - MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
90. arid4a ENSDARG00000043873 4176 1.757 - 0.967 - - - - - - 0.790 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
91. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.748 - - - - - 0.941 - - 0.807 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
92. pvrl1b 1645 1.748 - - - - - 0.874 - - 0.874 poliovirus receptor-related 1b
93. lsm7 ENSDARG00000058328 7191 1.748 - 0.905 - - - - 0.843 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
94. atp6v1c1b ENSDARG00000035880, ENSDARG00000112507 1869 1.748 - 0.839 - - - - 0.909 - - ATPase H+ transporting V1 subunit C1b [Source:ZFIN;Acc:ZDB-GENE-041010-104]
95. gstal gstal 1865 1.744 - - - - - - 0.914 - 0.830
96. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.739 - - 0.977 - - - 0.762 - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
97. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.734 - - - 0.756 - - 0.978 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
98. mrps30 ENSDARG00000104111 2900 1.734 - - - - - 0.796 0.938 - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
99. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.733 - - - - - 0.898 - - 0.835 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
100. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.732 - 0.978 - - - 0.754 - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]

There are 2092 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA