Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ift88

Gene Name Gene ID Reads Annotation
ift88 ENSDARG00000027234, ENSDARG00000113909 168 intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]










Genes with expression patterns similar to ift88

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ift88 ENSDARG00000027234, ENSDARG00000113909 168 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]
2. mcph1 ENSDARG00000058372 51 1.731 - 0.818 - - - - 0.913 - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
3. si:ch73-167f18.4 si:ch73-167f18.4 9 1.713 - 0.874 - - - - 0.839 - -
4. toporsb ENSDARG00000105028 1898 1.631 - - - 0.877 - 0.754 - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
5. numbl ENSDARG00000101949, ENSDARG00000112946 87 1.614 - 0.701 - - - - 0.913 - - numb homolog (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-051113-340]
6. rgs12a ENSDARG00000009610 284 1.555 - 0.745 - - - - 0.810 - - regulator of G protein signaling 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2614]
7. FGL1 ENSDARG00000105380 147 1.54 0.741 - - - - - 0.799 - - fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1]
8. CU633908.1 ENSDARG00000113928 222 1.511 - - - 0.769 - 0.742 - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b [Source:NCBI gene;Acc:100332644]
9. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.503 - - - - - 0.710 0.793 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
10. asb12b ENSDARG00000037558, ENSDARG00000113049, ENSDARG00000116721 378 1.478 - 0.734 - - - - 0.744 - - ankyrin repeat and SOCS box-containing 12b [Source:ZFIN;Acc:ZDB-GENE-040822-25]
11. efna3a ENSDARG00000014675 68 1.477 - - - - - 0.714 0.763 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
12. bicc1b ENSDARG00000070497 406 1.47 - 0.719 - 0.751 - - - - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
13. adamts10 ENSDARG00000075188 225 1.469 - 0.701 - 0.768 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 10 [Source:ZFIN;Acc:ZDB-GENE-081104-414]
14. ache ENSDARG00000031796 1985 1.45 - 0.710 - - - 0.740 - - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
15. shisa4 ENSDARG00000006307, ENSDARG00000112041 109 0.957 - 0.957 - - - - - - - shisa family member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-419]
16. PLA2G3 ENSDARG00000008948 23 0.951 - - - - - - 0.951 - - phospholipase A2 group III [Source:ZFIN;Acc:ZDB-GENE-051113-96]
17. dnajb2 ENSDARG00000058644 30 0.951 - - - - - - 0.951 - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
18. si:ch1073-219n12.1 71 0.951 - - - - - - 0.951 - - si:ch1073-219n12.1, transcript variant X1
19. mapk8a ENSDARG00000031888 44 0.951 - - - - - - 0.951 - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
20. ATP5J2 68 0.945 - 0.945 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
21. znf532 ENSDARG00000052894 118 0.944 - 0.944 - - - - - - - zinc finger protein 532 [Source:ZFIN;Acc:ZDB-GENE-060531-40]
22. crfb1 ENSDARG00000068681, ENSDARG00000111369, ENSDARG00000112496 75 0.944 - 0.944 - - - - - - - cytokine receptor family member b1 [Source:ZFIN;Acc:ZDB-GENE-030131-8673]
23. fam160b1 ENSDARG00000060168 22 0.941 - 0.941 - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
24. GPR32 GPR32 0 0.913 - - - - - - 0.913 - -
25. ulk3 ENSDARG00000101661 69 0.913 - - - - - - 0.913 - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
26. ankdd1a ENSDARG00000098647 8 0.913 - - - - - - 0.913 - - ankyrin repeat and death domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-070615-8]
27. zgc:92275 ENSDARG00000034048 9 0.913 - - - - - - 0.913 - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
28. v2ra20 ENSDARG00000094862 0 0.913 - - - - - - 0.913 - - vomeronasal 2 receptor, a20 [Source:ZFIN;Acc:ZDB-GENE-050419-220]
29. si:dkey-10f21.16 si:dkey-10f21.16 252 0.913 - - - - - - 0.913 - -
30. ppp1r37_1 ENSDARG00000078458 36 0.913 - - - - - - 0.913 - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
31. si:dkey-30c15.9 si:dkey-30c15.9 4 0.913 - - - - - - 0.913 - -
32. TSPAN2 TSPAN2 3 0.913 - - - - - - 0.913 - -
33. fhit_1 ENSDARG00000078195 91 0.913 - - - - - - 0.913 - - fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
34. acoxl ENSDARG00000020149 14 0.913 - - - - - - 0.913 - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
35. BX897671.1 BX897671.1 10 0.913 - - - - - - 0.913 - -
36. zgc:173702_1 ENSDARG00000110229 24 0.913 - - - - - - 0.913 - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
37. zgc:110353 ENSDARG00000039443 80 0.913 - - - - - - 0.913 - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
38. AL954698.2 ENSDARG00000102132 28 0.913 - - - - - - 0.913 - -
39. ENSDARG00000092956 ENSDARG00000092956 1 0.913 - - - - - - 0.913 - -
40. PEG3_35 PEG3_35 52 0.913 - - - - - - 0.913 - -
41. asf1ba ENSDARG00000101037 49 0.913 - - - - - - 0.913 - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
42. znf423 ENSDARG00000095732 13 0.913 - - - - - - 0.913 - - zinc finger protein 423 [Source:ZFIN;Acc:ZDB-GENE-030131-4368]
43. ZSWIM2 ENSDARG00000075700 8 0.913 - - - - - - 0.913 - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
44. cog6 ENSDARG00000103149 39 0.913 - - - - - - 0.913 - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
45. fam207a_1 ENSDARG00000071500 1 0.913 - - - - - - 0.913 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
46. PRICKLE2 PRICKLE2 69 0.913 - - - - - - 0.913 - -
47. zgc:101731 ENSDARG00000040965 27 0.913 - - - - - - 0.913 - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
48. gpsm1a ENSDARG00000092517 784 0.913 - - - - - - 0.913 - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
49. BX004785.2 ENSDARG00000093487 10 0.913 - - - - - - 0.913 - -
50. mapkap1 ENSDARG00000091777 8 0.913 - - - - - - 0.913 - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
51. kif17 ENSDARG00000055238 12 0.913 - - - - - - 0.913 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
52. hcrt ENSDARG00000070932 4 0.913 - - - - - - 0.913 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
53. cdc42ep2 ENSDARG00000053959 32 0.913 - - - - - - 0.913 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
54. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.913 - - - - - - 0.913 - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
55. igsf5 igsf5 85 0.913 - - - - - - 0.913 - -
56. BX649394.1 BX649394.1 1 0.913 - - - - - - 0.913 - -
57. frmd4bb ENSDARG00000076496 18 0.913 - - - - - - 0.913 - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
58. si:dkey-167i21.2 ENSDARG00000093886 10 0.913 - - - - - - 0.913 - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
59. panx2 ENSDARG00000063019 3 0.913 - - - - - - 0.913 - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
60. si:ch211-209f23.3 ENSDARG00000095607 15 0.913 - - - - - - 0.913 - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
61. NAGK ENSDARG00000099116 6 0.913 - - - - - - 0.913 - - N-acetylglucosamine kinase [Source:ZFIN;Acc:ZDB-GENE-070928-19]
62. wbscr27 wbscr27 70 0.913 - - - - - - 0.913 - -
63. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 0.913 - - - - - - 0.913 - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
64. FP236542.1 ENSDARG00000116988 1 0.913 - - - - - - 0.913 - - alpha-2B adrenergic receptor-like [Source:NCBI gene;Acc:100330650]
65. CR382327.1 ENSDARG00000088739 56 0.913 - - - - - - 0.913 - -
66. st8sia3 ENSDARG00000045301 3 0.913 - - - - - - 0.913 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
67. KIF21B ENSDARG00000009733 53 0.913 - - - - - - 0.913 - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
68. CR854829.1 ENSDARG00000101518 17 0.913 - - - - - - 0.913 - -
69. CR339051.1 CR339051.1 9 0.913 - - - - - - 0.913 - -
70. URB1 ENSDARG00000060308 78 0.913 - - - - - - 0.913 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
71. si:dkey-162b3.5 si:dkey-162b3.5 24 0.913 - - - - - - 0.913 - -
72. cd74b ENSDARG00000036628 8 0.913 - - - - - - 0.913 - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
73. BX927314.1 BX927314.1 47 0.913 - - - - - - 0.913 - -
74. EGR4_1 EGR4_1 14 0.913 - - - - - - 0.913 - -
75. FAM150A 14 0.913 - - - - - - 0.913 - - family with sequence similarity 150 member A, transcript variant X2
76. EXD1 ENSDARG00000098669 27 0.913 - - - - - - 0.913 - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
77. baiap2l2 baiap2l2 30 0.913 - - - - - - 0.913 - -
78. ccbl2 4 0.913 - - - - - - 0.913 - - cysteine conjugate-beta lyase 2, transcript variant X4
79. ENSDARG00000086640 ENSDARG00000086640 3 0.913 - - - - - - 0.913 - -
80. insl3 ENSDARG00000035862 1 0.913 - - - - - - 0.913 - - insulin-like 3 (Leydig cell) [Source:ZFIN;Acc:ZDB-GENE-050310-5]
81. si:dkey-27c15.3 ENSDARG00000056847 37 0.913 - - - - - - 0.913 - - si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
82. CR318653.1 ENSDARG00000104557 29 0.913 - - - - - - 0.913 - -
83. BPHL ENSDARG00000102877 28 0.913 - - - - - - 0.913 - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
84. vrtn ENSDARG00000061963, ENSDARG00000115943 42 0.913 - - - - - - 0.913 - - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
85. si:ch211-255l14.3 si:ch211-255l14.3 2 0.913 - - - - - - 0.913 - -
86. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 0.913 - - - - - - 0.913 - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
87. pax4 ENSDARG00000021336 29 0.913 - - - - - - 0.913 - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
88. si:ch211-133l5.8 ENSDARG00000027676 23 0.913 - - - - - - 0.913 - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
89. tceanc2 ENSDARG00000062919 32 0.913 - - - - - - 0.913 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
90. rap2ab ENSDARG00000040246 63 0.913 - - - - - - 0.913 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
91. cdk20 ENSDARG00000003867 27 0.913 - - - - - - 0.913 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
92. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 0.913 - - - - - - 0.913 - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
93. TMEM74B ENSDARG00000078868 45 0.913 - - - - - - 0.913 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
94. zgc:110434 21 0.913 - - - - - - 0.913 - - zgc:110434
95. CLDN20 26 0.913 - - - - - - 0.913 - - claudin 20, transcript variant X2
96. bon bon 20 0.913 - - - - - - 0.913 - -
97. CABZ01078515.1 CABZ01078515.1 25 0.913 - - - - - - 0.913 - -
98. ENSDARG00000091766 ENSDARG00000091766 15 0.913 - - - - - - 0.913 - -
99. CABZ01077140.1 CABZ01077140.1 2 0.913 - - - - - - 0.913 - -
100. tmem179b ENSDARG00000069495 17 0.913 - - - - - - 0.913 - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]

There are 648 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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