Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ift88

Gene Name Gene ID Reads Annotation
ift88 ENSDARG00000027234, ENSDARG00000113909 168 intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]










Genes with expression patterns similar to ift88

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ift88 ENSDARG00000027234, ENSDARG00000113909 168 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]
2. mcph1 ENSDARG00000058372 51 1.731 - 0.818 - - - - 0.913 - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
3. si:ch73-167f18.4 si:ch73-167f18.4 9 1.713 - 0.874 - - - - 0.839 - -
4. toporsb ENSDARG00000105028 1898 1.631 - - - 0.877 - 0.754 - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
5. numbl ENSDARG00000101949, ENSDARG00000112946 87 1.614 - 0.701 - - - - 0.913 - - numb homolog (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-051113-340]
6. rgs12a ENSDARG00000009610 284 1.555 - 0.745 - - - - 0.810 - - regulator of G protein signaling 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2614]
7. FGL1 ENSDARG00000105380 147 1.54 0.741 - - - - - 0.799 - - fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1]
8. CU633908.1 ENSDARG00000113928 222 1.511 - - - 0.769 - 0.742 - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b [Source:NCBI gene;Acc:100332644]
9. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.503 - - - - - 0.710 0.793 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
10. asb12b ENSDARG00000037558, ENSDARG00000113049, ENSDARG00000116721 378 1.478 - 0.734 - - - - 0.744 - - ankyrin repeat and SOCS box-containing 12b [Source:ZFIN;Acc:ZDB-GENE-040822-25]
11. efna3a ENSDARG00000014675 68 1.477 - - - - - 0.714 0.763 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
12. bicc1b ENSDARG00000070497 406 1.47 - 0.719 - 0.751 - - - - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
13. adamts10 ENSDARG00000075188 225 1.469 - 0.701 - 0.768 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 10 [Source:ZFIN;Acc:ZDB-GENE-081104-414]
14. ache ENSDARG00000031796 1985 1.45 - 0.710 - - - 0.740 - - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
15. shisa4 ENSDARG00000006307, ENSDARG00000112041 109 0.957 - 0.957 - - - - - - - shisa family member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-419]
16. dnajb2 ENSDARG00000058644 30 0.951 - - - - - - 0.951 - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
17. mapk8a ENSDARG00000031888 44 0.951 - - - - - - 0.951 - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
18. PLA2G3 ENSDARG00000008948 23 0.951 - - - - - - 0.951 - - phospholipase A2 group III [Source:ZFIN;Acc:ZDB-GENE-051113-96]
19. si:ch1073-219n12.1 71 0.951 - - - - - - 0.951 - - si:ch1073-219n12.1, transcript variant X1
20. ATP5J2 68 0.945 - 0.945 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
21. znf532 ENSDARG00000052894 118 0.944 - 0.944 - - - - - - - zinc finger protein 532 [Source:ZFIN;Acc:ZDB-GENE-060531-40]
22. crfb1 ENSDARG00000068681, ENSDARG00000111369, ENSDARG00000112496 75 0.944 - 0.944 - - - - - - - cytokine receptor family member b1 [Source:ZFIN;Acc:ZDB-GENE-030131-8673]
23. fam160b1 ENSDARG00000060168 22 0.941 - 0.941 - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
24. wu:fb37b09 wu:fb37b09 10685 0.913 - - - - - - 0.913 - -
25. sst3 61 0.913 - - - - - - 0.913 - - somatostatin 3
26. pappab ENSDARG00000059858 11 0.913 - - - - - - 0.913 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
27. GPC5 GPC5 11 0.913 - - - - - - 0.913 - -
28. PDE9A ENSDARG00000060280 58 0.913 - - - - - - 0.913 - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
29. kif17 ENSDARG00000055238 12 0.913 - - - - - - 0.913 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
30. ENSDARG00000092956 ENSDARG00000092956 1 0.913 - - - - - - 0.913 - -
31. FYB FYB 3 0.913 - - - - - - 0.913 - -
32. mink1 ENSDARG00000035360, ENSDARG00000112785 13 0.913 - - - - - - 0.913 - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
33. si:ch211-113a14.26_4 31 0.913 - - - - - - 0.913 - - si:ch211-113a14.26
34. si:dkey-30c15.9 si:dkey-30c15.9 4 0.913 - - - - - - 0.913 - -
35. prnpb ENSDARG00000044048, ENSDARG00000115858 9 0.913 - - - - - - 0.913 - - prion protein b [Source:ZFIN;Acc:ZDB-GENE-041221-2]
36. cdc42ep2 ENSDARG00000053959 32 0.913 - - - - - - 0.913 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
37. si:ch211-255l14.3 si:ch211-255l14.3 2 0.913 - - - - - - 0.913 - -
38. pax4 ENSDARG00000021336 29 0.913 - - - - - - 0.913 - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
39. rap2ab ENSDARG00000040246 63 0.913 - - - - - - 0.913 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
40. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 0.913 - - - - - - 0.913 - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
41. si:ch211-106n13.3 ENSDARG00000052633 3 0.913 - - - - - - 0.913 - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
42. zgc:110353 ENSDARG00000039443 80 0.913 - - - - - - 0.913 - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
43. znf423 ENSDARG00000095732 13 0.913 - - - - - - 0.913 - - zinc finger protein 423 [Source:ZFIN;Acc:ZDB-GENE-030131-4368]
44. KSR1_1 KSR1_1 1 0.913 - - - - - - 0.913 - -
45. cd74b ENSDARG00000036628 8 0.913 - - - - - - 0.913 - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
46. CR339051.1 CR339051.1 9 0.913 - - - - - - 0.913 - -
47. CR382327.1 ENSDARG00000088739 56 0.913 - - - - - - 0.913 - -
48. ccbl2 4 0.913 - - - - - - 0.913 - - cysteine conjugate-beta lyase 2, transcript variant X4
49. EXD1 ENSDARG00000098669 27 0.913 - - - - - - 0.913 - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
50. ei24 ENSDARG00000053840 78 0.913 - - - - - - 0.913 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
51. arf3a ENSDARG00000070539 29 0.913 - - - - - - 0.913 - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
52. OGDHL ENSDARG00000079249 0 0.913 - - - - - - 0.913 - - oxoglutarate dehydrogenase like [Source:ZFIN;Acc:ZDB-GENE-111201-4]
53. cart2 ENSDARG00000045832, ENSDARG00000112535 13 0.913 - - - - - - 0.913 - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
54. FP016199.1 FP016199.1 43 0.913 - - - - - - 0.913 - -
55. prf1.5 ENSDARG00000037598, ENSDARG00000113302 3 0.913 - - - - - - 0.913 - - perforin 1.5 [Source:ZFIN;Acc:ZDB-GENE-081105-3]
56. aasdh ENSDARG00000022730 13 0.913 - - - - - - 0.913 - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
57. TSPAN2 TSPAN2 3 0.913 - - - - - - 0.913 - -
58. cplx4a ENSDARG00000059978 6 0.913 - - - - - - 0.913 - - complexin 4a [Source:ZFIN;Acc:ZDB-GENE-060526-116]
59. si:dkey-150k17.2 si:dkey-150k17.2 40 0.913 - - - - - - 0.913 - -
60. U4_1 U4_1 2 0.913 - - - - - - 0.913 - -
61. BX927314.1 BX927314.1 47 0.913 - - - - - - 0.913 - -
62. stk33 ENSDARG00000054318, ENSDARG00000114909 34 0.913 - - - - - - 0.913 - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
63. si:ch211-209f23.3 ENSDARG00000095607 15 0.913 - - - - - - 0.913 - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
64. si:ch211-229c8.4 ENSDARG00000056154 1 0.913 - - - - - - 0.913 - - si:ch211-229c8.4 [Source:ZFIN;Acc:ZDB-GENE-050419-129]
65. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 0.913 - - - - - - 0.913 - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
66. AL954698.2 ENSDARG00000102132 28 0.913 - - - - - - 0.913 - -
67. cog6 ENSDARG00000103149 39 0.913 - - - - - - 0.913 - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
68. PRICKLE2 PRICKLE2 69 0.913 - - - - - - 0.913 - -
69. tceanc2 ENSDARG00000062919 32 0.913 - - - - - - 0.913 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
70. si:ch211-240g9.1 36 0.913 - - - - - - 0.913 - - si:ch211-240g9.1
71. si:dkey-96l17.6 ENSDARG00000094540 4 0.913 - - - - - - 0.913 - - si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
72. FAM150A 14 0.913 - - - - - - 0.913 - - family with sequence similarity 150 member A, transcript variant X2
73. insl3 ENSDARG00000035862 1 0.913 - - - - - - 0.913 - - insulin-like 3 (Leydig cell) [Source:ZFIN;Acc:ZDB-GENE-050310-5]
74. URB1 ENSDARG00000060308 78 0.913 - - - - - - 0.913 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
75. barx1 ENSDARG00000007407 344 0.913 - - - - - - 0.913 - - BARX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050522-28]
76. znf536 ENSDARG00000103648 6 0.913 - - - - - - 0.913 - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
77. foxm1 ENSDARG00000003200 8 0.913 - - - - - - 0.913 - - forkhead box M1 [Source:ZFIN;Acc:ZDB-GENE-040426-1275]
78. ppp1r37_1 ENSDARG00000078458 36 0.913 - - - - - - 0.913 - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
79. ENSDARG00000091766 ENSDARG00000091766 15 0.913 - - - - - - 0.913 - -
80. FCF1 ENSDARG00000102333 59 0.913 - - - - - - 0.913 - - FCF1 rRNA-processing protein [Source:ZFIN;Acc:ZDB-GENE-050417-67]
81. cd247l ENSDARG00000077240 25 0.913 - - - - - - 0.913 - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
82. si:dkey-10f21.16 si:dkey-10f21.16 252 0.913 - - - - - - 0.913 - -
83. kdm2ba ENSDARG00000036593 96 0.913 - - - - - - 0.913 - - lysine (K)-specific demethylase 2Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2195]
84. mapkap1 ENSDARG00000091777 8 0.913 - - - - - - 0.913 - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
85. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 0.913 - - - - - - 0.913 - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
86. hcrt ENSDARG00000070932 4 0.913 - - - - - - 0.913 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
87. v2ra20 ENSDARG00000094862 0 0.913 - - - - - - 0.913 - - vomeronasal 2 receptor, a20 [Source:ZFIN;Acc:ZDB-GENE-050419-220]
88. panx2 ENSDARG00000063019 3 0.913 - - - - - - 0.913 - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
89. si:rp71-7l19.6 si:rp71-7l19.6 12 0.913 - - - - - - 0.913 - -
90. TMEM74B ENSDARG00000078868 45 0.913 - - - - - - 0.913 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
91. rhoab ENSDARG00000094673 26 0.913 - - - - - - 0.913 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
92. CR854829.1 ENSDARG00000101518 17 0.913 - - - - - - 0.913 - -
93. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.913 - - - - - - 0.913 - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
94. CAMSAP2 CAMSAP2 109 0.913 - - - - - - 0.913 - -
95. vrtn ENSDARG00000061963, ENSDARG00000115943 42 0.913 - - - - - - 0.913 - - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
96. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 0.913 - - - - - - 0.913 - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
97. si:ch211-133l5.8 ENSDARG00000027676 23 0.913 - - - - - - 0.913 - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
98. EGR4_1 EGR4_1 14 0.913 - - - - - - 0.913 - -
99. zgc:173702_1 ENSDARG00000110229 24 0.913 - - - - - - 0.913 - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
100. wbscr27 wbscr27 70 0.913 - - - - - - 0.913 - -

There are 648 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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