Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ift88

Gene Name Gene ID Reads Annotation
ift88 ENSDARG00000027234, ENSDARG00000113909 168 intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]










Genes with expression patterns similar to ift88

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ift88 ENSDARG00000027234, ENSDARG00000113909 168 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]
2. mcph1 ENSDARG00000058372 51 1.731 - 0.818 - - - - 0.913 - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
3. si:ch73-167f18.4 si:ch73-167f18.4 9 1.713 - 0.874 - - - - 0.839 - -
4. toporsb ENSDARG00000105028 1898 1.631 - - - 0.877 - 0.754 - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
5. numbl ENSDARG00000101949, ENSDARG00000112946 87 1.614 - 0.701 - - - - 0.913 - - numb homolog (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-051113-340]
6. rgs12a ENSDARG00000009610 284 1.555 - 0.745 - - - - 0.810 - - regulator of G protein signaling 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2614]
7. FGL1 ENSDARG00000105380 147 1.54 0.741 - - - - - 0.799 - - fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1]
8. CU633908.1 ENSDARG00000113928 222 1.511 - - - 0.769 - 0.742 - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b [Source:NCBI gene;Acc:100332644]
9. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.503 - - - - - 0.710 0.793 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
10. asb12b ENSDARG00000037558, ENSDARG00000113049, ENSDARG00000116721 378 1.478 - 0.734 - - - - 0.744 - - ankyrin repeat and SOCS box-containing 12b [Source:ZFIN;Acc:ZDB-GENE-040822-25]
11. efna3a ENSDARG00000014675 68 1.477 - - - - - 0.714 0.763 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
12. bicc1b ENSDARG00000070497 406 1.47 - 0.719 - 0.751 - - - - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
13. adamts10 ENSDARG00000075188 225 1.469 - 0.701 - 0.768 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 10 [Source:ZFIN;Acc:ZDB-GENE-081104-414]
14. ache ENSDARG00000031796 1985 1.45 - 0.710 - - - 0.740 - - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
15. shisa4 ENSDARG00000006307, ENSDARG00000112041 109 0.957 - 0.957 - - - - - - - shisa family member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-419]
16. dnajb2 ENSDARG00000058644 30 0.951 - - - - - - 0.951 - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
17. PLA2G3 ENSDARG00000008948 23 0.951 - - - - - - 0.951 - - phospholipase A2 group III [Source:ZFIN;Acc:ZDB-GENE-051113-96]
18. si:ch1073-219n12.1 71 0.951 - - - - - - 0.951 - - si:ch1073-219n12.1, transcript variant X1
19. mapk8a ENSDARG00000031888 44 0.951 - - - - - - 0.951 - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
20. ATP5J2 68 0.945 - 0.945 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
21. crfb1 ENSDARG00000068681, ENSDARG00000111369, ENSDARG00000112496 75 0.944 - 0.944 - - - - - - - cytokine receptor family member b1 [Source:ZFIN;Acc:ZDB-GENE-030131-8673]
22. znf532 ENSDARG00000052894 118 0.944 - 0.944 - - - - - - - zinc finger protein 532 [Source:ZFIN;Acc:ZDB-GENE-060531-40]
23. fam160b1 ENSDARG00000060168 22 0.941 - 0.941 - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
24. zdhhc12b ENSDARG00000052787 43 0.913 - - - - - - 0.913 - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
25. BX897671.1 BX897671.1 10 0.913 - - - - - - 0.913 - -
26. FYB FYB 3 0.913 - - - - - - 0.913 - -
27. rhoab ENSDARG00000094673 26 0.913 - - - - - - 0.913 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
28. zgc:92275 ENSDARG00000034048 9 0.913 - - - - - - 0.913 - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
29. si:ch211-240g9.1 36 0.913 - - - - - - 0.913 - - si:ch211-240g9.1
30. lars2 ENSDARG00000075337 31 0.913 - - - - - - 0.913 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
31. ENSDARG00000086640 ENSDARG00000086640 3 0.913 - - - - - - 0.913 - -
32. BPHL ENSDARG00000102877 28 0.913 - - - - - - 0.913 - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
33. si:dkey-208k4.1 si:dkey-208k4.1 15 0.913 - - - - - - 0.913 - -
34. cd247l ENSDARG00000077240 25 0.913 - - - - - - 0.913 - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
35. GPR32 GPR32 0 0.913 - - - - - - 0.913 - -
36. si:ch211-213i16.4 8 0.913 - - - - - - 0.913 - - si:ch211-213i16.4, transcript variant X1
37. CR847847.1 CR847847.1 0 0.913 - - - - - - 0.913 - -
38. elmod3 ENSDARG00000074742 6 0.913 - - - - - - 0.913 - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
39. pax7a ENSDARG00000100398, ENSDARG00000111233 37 0.913 - - - - - - 0.913 - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
40. AL954698.2 ENSDARG00000102132 28 0.913 - - - - - - 0.913 - -
41. arf3a ENSDARG00000070539 29 0.913 - - - - - - 0.913 - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
42. tceanc2 ENSDARG00000062919 32 0.913 - - - - - - 0.913 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
43. frmd4bb ENSDARG00000076496 18 0.913 - - - - - - 0.913 - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
44. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 0.913 - - - - - - 0.913 - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
45. BX323994.1 ENSDARG00000078927 15 0.913 - - - - - - 0.913 - - uncharacterized LOC108190035 [Source:NCBI gene;Acc:108190035]
46. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.913 - - - - - - 0.913 - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
47. mapkap1 ENSDARG00000091777 8 0.913 - - - - - - 0.913 - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
48. CR382327.1 ENSDARG00000088739 56 0.913 - - - - - - 0.913 - -
49. wu:fb63a08 38 0.913 - - - - - - 0.913 - - wu:fb63a08
50. KSR1_1 KSR1_1 1 0.913 - - - - - - 0.913 - -
51. fam207a_1 ENSDARG00000071500 1 0.913 - - - - - - 0.913 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
52. TMBIM1 TMBIM1 2 0.913 - - - - - - 0.913 - -
53. ALOX5 ALOX5 0 0.913 - - - - - - 0.913 - -
54. hcrt ENSDARG00000070932 4 0.913 - - - - - - 0.913 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
55. znf423 ENSDARG00000095732 13 0.913 - - - - - - 0.913 - - zinc finger protein 423 [Source:ZFIN;Acc:ZDB-GENE-030131-4368]
56. KIF21B ENSDARG00000009733 53 0.913 - - - - - - 0.913 - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
57. OGDHL ENSDARG00000079249 0 0.913 - - - - - - 0.913 - - oxoglutarate dehydrogenase like [Source:ZFIN;Acc:ZDB-GENE-111201-4]
58. zgc:173702_1 ENSDARG00000110229 24 0.913 - - - - - - 0.913 - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
59. igsf5 igsf5 85 0.913 - - - - - - 0.913 - -
60. si:dkey-27c15.3 ENSDARG00000056847 37 0.913 - - - - - - 0.913 - - si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
61. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 0.913 - - - - - - 0.913 - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
62. bon bon 20 0.913 - - - - - - 0.913 - -
63. mink1 ENSDARG00000035360, ENSDARG00000112785 13 0.913 - - - - - - 0.913 - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
64. dusp3b ENSDARG00000060130 3 0.913 - - - - - - 0.913 - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
65. CCDC74B CCDC74B 8 0.913 - - - - - - 0.913 - -
66. FCF1 ENSDARG00000102333 59 0.913 - - - - - - 0.913 - - FCF1 rRNA-processing protein [Source:ZFIN;Acc:ZDB-GENE-050417-67]
67. cd74b ENSDARG00000036628 8 0.913 - - - - - - 0.913 - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
68. PDE9A ENSDARG00000060280 58 0.913 - - - - - - 0.913 - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
69. cdk20 ENSDARG00000003867 27 0.913 - - - - - - 0.913 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
70. BX649394.1 BX649394.1 1 0.913 - - - - - - 0.913 - -
71. BX927314.1 BX927314.1 47 0.913 - - - - - - 0.913 - -
72. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 0.913 - - - - - - 0.913 - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
73. rap2ab ENSDARG00000040246 63 0.913 - - - - - - 0.913 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
74. prf1.5 ENSDARG00000037598, ENSDARG00000113302 3 0.913 - - - - - - 0.913 - - perforin 1.5 [Source:ZFIN;Acc:ZDB-GENE-081105-3]
75. TMEM74B ENSDARG00000078868 45 0.913 - - - - - - 0.913 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
76. tg ENSDARG00000020084 40 0.913 - - - - - - 0.913 - - thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
77. GPR116 GPR116 1 0.913 - - - - - - 0.913 - -
78. si:dkey-96l17.6 ENSDARG00000094540 4 0.913 - - - - - - 0.913 - - si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
79. cog6 ENSDARG00000103149 39 0.913 - - - - - - 0.913 - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
80. si:ch211-255l14.3 si:ch211-255l14.3 2 0.913 - - - - - - 0.913 - -
81. U4_1 U4_1 2 0.913 - - - - - - 0.913 - -
82. wbscr27 wbscr27 70 0.913 - - - - - - 0.913 - -
83. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 0.913 - - - - - - 0.913 - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
84. znf536 ENSDARG00000103648 6 0.913 - - - - - - 0.913 - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
85. si:dkey-162b3.5 si:dkey-162b3.5 24 0.913 - - - - - - 0.913 - -
86. zgc:163061 ENSDARG00000075538, ENSDARG00000076766 54 0.913 - - - - - - 0.913 - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
87. GPC5 GPC5 11 0.913 - - - - - - 0.913 - -
88. cdc42ep2 ENSDARG00000053959 32 0.913 - - - - - - 0.913 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
89. si:dkey-167i21.2 ENSDARG00000093886 10 0.913 - - - - - - 0.913 - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
90. CR339051.1 CR339051.1 9 0.913 - - - - - - 0.913 - -
91. si:dkey-30c15.9 si:dkey-30c15.9 4 0.913 - - - - - - 0.913 - -
92. FP236542.1 ENSDARG00000116988 1 0.913 - - - - - - 0.913 - - alpha-2B adrenergic receptor-like [Source:NCBI gene;Acc:100330650]
93. cd44a ENSDARG00000087863 4 0.913 - - - - - - 0.913 - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
94. acoxl ENSDARG00000020149 14 0.913 - - - - - - 0.913 - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
95. SIMC1 SIMC1 103 0.913 - - - - - - 0.913 - -
96. asf1ba ENSDARG00000101037 49 0.913 - - - - - - 0.913 - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
97. fhit_1 ENSDARG00000078195 91 0.913 - - - - - - 0.913 - - fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
98. ppp1r37_1 ENSDARG00000078458 36 0.913 - - - - - - 0.913 - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
99. CLDN20 26 0.913 - - - - - - 0.913 - - claudin 20, transcript variant X2
100. zeb2b ENSDARG00000078416 23 0.913 - - - - - - 0.913 - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]

There are 648 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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