Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ift88

Gene Name Gene ID Reads Annotation
ift88 ENSDARG00000027234, ENSDARG00000113909 168 intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]










Genes with expression patterns similar to ift88

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ift88 ENSDARG00000027234, ENSDARG00000113909 168 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]
2. mcph1 ENSDARG00000058372 51 1.731 - 0.818 - - - - 0.913 - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
3. si:ch73-167f18.4 si:ch73-167f18.4 9 1.713 - 0.874 - - - - 0.839 - -
4. toporsb ENSDARG00000105028 1898 1.631 - - - 0.877 - 0.754 - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
5. numbl ENSDARG00000101949, ENSDARG00000112946 87 1.614 - 0.701 - - - - 0.913 - - numb homolog (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-051113-340]
6. rgs12a ENSDARG00000009610 284 1.555 - 0.745 - - - - 0.810 - - regulator of G protein signaling 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2614]
7. FGL1 ENSDARG00000105380 147 1.54 0.741 - - - - - 0.799 - - fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1]
8. CU633908.1 ENSDARG00000113928 222 1.511 - - - 0.769 - 0.742 - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b [Source:NCBI gene;Acc:100332644]
9. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.503 - - - - - 0.710 0.793 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
10. asb12b ENSDARG00000037558, ENSDARG00000113049, ENSDARG00000116721 378 1.478 - 0.734 - - - - 0.744 - - ankyrin repeat and SOCS box-containing 12b [Source:ZFIN;Acc:ZDB-GENE-040822-25]
11. efna3a ENSDARG00000014675 68 1.477 - - - - - 0.714 0.763 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
12. bicc1b ENSDARG00000070497 406 1.47 - 0.719 - 0.751 - - - - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
13. adamts10 ENSDARG00000075188 225 1.469 - 0.701 - 0.768 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 10 [Source:ZFIN;Acc:ZDB-GENE-081104-414]
14. ache ENSDARG00000031796 1985 1.45 - 0.710 - - - 0.740 - - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
15. shisa4 ENSDARG00000006307, ENSDARG00000112041 109 0.957 - 0.957 - - - - - - - shisa family member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-419]
16. dnajb2 ENSDARG00000058644 30 0.951 - - - - - - 0.951 - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
17. mapk8a ENSDARG00000031888 44 0.951 - - - - - - 0.951 - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
18. PLA2G3 ENSDARG00000008948 23 0.951 - - - - - - 0.951 - - phospholipase A2 group III [Source:ZFIN;Acc:ZDB-GENE-051113-96]
19. si:ch1073-219n12.1 71 0.951 - - - - - - 0.951 - - si:ch1073-219n12.1, transcript variant X1
20. ATP5J2 68 0.945 - 0.945 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
21. crfb1 ENSDARG00000068681, ENSDARG00000111369, ENSDARG00000112496 75 0.944 - 0.944 - - - - - - - cytokine receptor family member b1 [Source:ZFIN;Acc:ZDB-GENE-030131-8673]
22. znf532 ENSDARG00000052894 118 0.944 - 0.944 - - - - - - - zinc finger protein 532 [Source:ZFIN;Acc:ZDB-GENE-060531-40]
23. fam160b1 ENSDARG00000060168 22 0.941 - 0.941 - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
24. si:ch211-133l5.8 ENSDARG00000027676 23 0.913 - - - - - - 0.913 - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
25. mapkap1 ENSDARG00000091777 8 0.913 - - - - - - 0.913 - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
26. KIF21B ENSDARG00000009733 53 0.913 - - - - - - 0.913 - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
27. PRICKLE2 PRICKLE2 69 0.913 - - - - - - 0.913 - -
28. tmem179b ENSDARG00000069495 17 0.913 - - - - - - 0.913 - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
29. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 0.913 - - - - - - 0.913 - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
30. si:ch211-213i16.4 8 0.913 - - - - - - 0.913 - - si:ch211-213i16.4, transcript variant X1
31. si:dkey-150k17.2 si:dkey-150k17.2 40 0.913 - - - - - - 0.913 - -
32. gpsm1a ENSDARG00000092517 784 0.913 - - - - - - 0.913 - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
33. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 0.913 - - - - - - 0.913 - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
34. EGR4_1 EGR4_1 14 0.913 - - - - - - 0.913 - -
35. si:dkey-27c15.3 ENSDARG00000056847 37 0.913 - - - - - - 0.913 - - si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
36. cplx4a ENSDARG00000059978 6 0.913 - - - - - - 0.913 - - complexin 4a [Source:ZFIN;Acc:ZDB-GENE-060526-116]
37. si:ch211-113a14.26_4 31 0.913 - - - - - - 0.913 - - si:ch211-113a14.26
38. BX649394.1 BX649394.1 1 0.913 - - - - - - 0.913 - -
39. si:dkey-30c15.9 si:dkey-30c15.9 4 0.913 - - - - - - 0.913 - -
40. GPR116 GPR116 1 0.913 - - - - - - 0.913 - -
41. rhoab ENSDARG00000094673 26 0.913 - - - - - - 0.913 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
42. ZSWIM2 ENSDARG00000075700 8 0.913 - - - - - - 0.913 - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
43. znf423 ENSDARG00000095732 13 0.913 - - - - - - 0.913 - - zinc finger protein 423 [Source:ZFIN;Acc:ZDB-GENE-030131-4368]
44. brinp3b ENSDARG00000075352 14 0.913 - - - - - - 0.913 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
45. lars2 ENSDARG00000075337 31 0.913 - - - - - - 0.913 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
46. si:ch211-255l14.3 si:ch211-255l14.3 2 0.913 - - - - - - 0.913 - -
47. wu:fb63a08 38 0.913 - - - - - - 0.913 - - wu:fb63a08
48. acoxl ENSDARG00000020149 14 0.913 - - - - - - 0.913 - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
49. barx1 ENSDARG00000007407 344 0.913 - - - - - - 0.913 - - BARX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050522-28]
50. EXD1 ENSDARG00000098669 27 0.913 - - - - - - 0.913 - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
51. CABZ01077140.1 CABZ01077140.1 2 0.913 - - - - - - 0.913 - -
52. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 0.913 - - - - - - 0.913 - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
53. fam207a_1 ENSDARG00000071500 1 0.913 - - - - - - 0.913 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
54. zgc:173702_1 ENSDARG00000110229 24 0.913 - - - - - - 0.913 - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
55. pappab ENSDARG00000059858 11 0.913 - - - - - - 0.913 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
56. zeb2b ENSDARG00000078416 23 0.913 - - - - - - 0.913 - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
57. PEG3_35 PEG3_35 52 0.913 - - - - - - 0.913 - -
58. st8sia3 ENSDARG00000045301 3 0.913 - - - - - - 0.913 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
59. NAGK ENSDARG00000099116 6 0.913 - - - - - - 0.913 - - N-acetylglucosamine kinase [Source:ZFIN;Acc:ZDB-GENE-070928-19]
60. cd44a ENSDARG00000087863 4 0.913 - - - - - - 0.913 - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
61. arf3a ENSDARG00000070539 29 0.913 - - - - - - 0.913 - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
62. stk33 ENSDARG00000054318, ENSDARG00000114909 34 0.913 - - - - - - 0.913 - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
63. tg ENSDARG00000020084 40 0.913 - - - - - - 0.913 - - thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
64. foxm1 ENSDARG00000003200 8 0.913 - - - - - - 0.913 - - forkhead box M1 [Source:ZFIN;Acc:ZDB-GENE-040426-1275]
65. zgc:110434 21 0.913 - - - - - - 0.913 - - zgc:110434
66. si:dkey-162b3.5 si:dkey-162b3.5 24 0.913 - - - - - - 0.913 - -
67. kif17 ENSDARG00000055238 12 0.913 - - - - - - 0.913 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
68. si:dkey-208k4.1 si:dkey-208k4.1 15 0.913 - - - - - - 0.913 - -
69. v2ra20 ENSDARG00000094862 0 0.913 - - - - - - 0.913 - - vomeronasal 2 receptor, a20 [Source:ZFIN;Acc:ZDB-GENE-050419-220]
70. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 0.913 - - - - - - 0.913 - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
71. pax7a ENSDARG00000100398, ENSDARG00000111233 37 0.913 - - - - - - 0.913 - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
72. igsf5 igsf5 85 0.913 - - - - - - 0.913 - -
73. CABZ01078515.1 CABZ01078515.1 25 0.913 - - - - - - 0.913 - -
74. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 0.913 - - - - - - 0.913 - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
75. si:ch211-229c8.4 ENSDARG00000056154 1 0.913 - - - - - - 0.913 - - si:ch211-229c8.4 [Source:ZFIN;Acc:ZDB-GENE-050419-129]
76. ei24 ENSDARG00000053840 78 0.913 - - - - - - 0.913 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
77. FCF1 ENSDARG00000102333 59 0.913 - - - - - - 0.913 - - FCF1 rRNA-processing protein [Source:ZFIN;Acc:ZDB-GENE-050417-67]
78. wbscr27 wbscr27 70 0.913 - - - - - - 0.913 - -
79. prf1.5 ENSDARG00000037598, ENSDARG00000113302 3 0.913 - - - - - - 0.913 - - perforin 1.5 [Source:ZFIN;Acc:ZDB-GENE-081105-3]
80. CR382327.1 ENSDARG00000088739 56 0.913 - - - - - - 0.913 - -
81. zgc:101731 ENSDARG00000040965 27 0.913 - - - - - - 0.913 - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
82. wu:fb37b09 wu:fb37b09 10685 0.913 - - - - - - 0.913 - -
83. elmod3 ENSDARG00000074742 6 0.913 - - - - - - 0.913 - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
84. zgc:92275 ENSDARG00000034048 9 0.913 - - - - - - 0.913 - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
85. si:ch211-106n13.3 ENSDARG00000052633 3 0.913 - - - - - - 0.913 - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
86. KSR1_1 KSR1_1 1 0.913 - - - - - - 0.913 - -
87. cd247l ENSDARG00000077240 25 0.913 - - - - - - 0.913 - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
88. CR854829.1 ENSDARG00000101518 17 0.913 - - - - - - 0.913 - -
89. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.913 - - - - - - 0.913 - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
90. hcrt ENSDARG00000070932 4 0.913 - - - - - - 0.913 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
91. BPHL ENSDARG00000102877 28 0.913 - - - - - - 0.913 - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
92. ccbl2 4 0.913 - - - - - - 0.913 - - cysteine conjugate-beta lyase 2, transcript variant X4
93. CR450793.1 ENSDARG00000088927 6 0.913 - - - - - - 0.913 - - zinc finger protein 436-like [Source:NCBI gene;Acc:103911751]
94. PDE9A ENSDARG00000060280 58 0.913 - - - - - - 0.913 - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
95. CR339051.1 CR339051.1 9 0.913 - - - - - - 0.913 - -
96. ankdd1a ENSDARG00000098647 8 0.913 - - - - - - 0.913 - - ankyrin repeat and death domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-070615-8]
97. HELZ2 ENSDARG00000012600 2 0.913 - - - - - - 0.913 - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
98. si:ch211-209f23.3 ENSDARG00000095607 15 0.913 - - - - - - 0.913 - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
99. FYB FYB 3 0.913 - - - - - - 0.913 - -
100. AL954698.2 ENSDARG00000102132 28 0.913 - - - - - - 0.913 - -

There are 648 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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