Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ift46

Gene Name Gene ID Reads Annotation
ift46 ENSDARG00000011240 2499 intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]










Genes with expression patterns similar to ift46

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ift46 ENSDARG00000011240 2499 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
2. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.812 - - - - - - 0.833 0.979 - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
3. Sep-06 Sep-06 5465 1.773 - - - - - - 0.808 0.965 -
4. apbb1 ENSDARG00000076560 1748 1.763 - - - - - - 0.799 0.964 - amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) [Source:ZFIN;Acc:ZDB-GENE-091118-127]
5. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.753 - 0.869 - - - - - 0.884 - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
6. tnfaip3 ENSDARG00000027777 1066 1.746 - 0.805 - - - - - 0.941 - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
7. dip2a ENSDARG00000078058 1625 1.73 - - - - - - 0.762 0.968 - disco-interacting protein 2 homolog A [Source:ZFIN;Acc:ZDB-GENE-091204-2]
8. tchp ENSDARG00000035605 1695 1.725 - - - - - - 0.734 0.991 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
9. med20 ENSDARG00000046006 614 1.715 - 0.729 - - - - - 0.986 - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
10. SBNO2 SBNO2 773 1.707 - 0.721 - - - - - 0.986 -
11. pold3 ENSDARG00000076169 694 1.702 - - - - - - - 0.991 0.711 polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
12. THEM4 ENSDARG00000061621 364 1.699 - - - - - - 0.708 0.991 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
13. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 1.692 - - - - - - 0.708 0.984 - kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
14. nup43 ENSDARG00000043884 794 1.692 - - - - - - 0.707 0.985 - nucleoporin 43 [Source:ZFIN;Acc:ZDB-GENE-040426-2533]
15. smc4 ENSDARG00000038882 4373 1.69 - 0.748 - - - - - 0.942 - structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
16. foxp1b ENSDARG00000014181 2594 1.678 - - - - - - 0.729 0.949 - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
17. CCDC114 ENSDARG00000015010 190 1.677 - 0.791 - - - - 0.886 - - coiled-coil domain containing 114 [Source:ZFIN;Acc:ZDB-GENE-041114-110]
18. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.662 - - - - - - 0.772 0.890 - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
19. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.651 - - - - - - 0.768 0.883 - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
20. phc2b_1 ENSDARG00000013224 1316 1.649 - - - - - - 0.709 0.940 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
21. cdkl1 ENSDARG00000017329 3345 1.648 - - 0.722 - - - - 0.926 - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
22. cox14 ENSDARG00000092124 2229 1.648 - 0.706 - - - - - 0.942 - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
23. nucks1b ENSDARG00000012777 4468 1.645 - - - - - - 0.708 0.937 - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
24. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.639 - 0.730 - - - - - 0.909 - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
25. boc ENSDARG00000074335 4832 1.634 - - - - - - 0.737 0.897 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
26. si:ch211-79l20.4 1305 1.63 - - - - - 0.722 - 0.908 - si:ch211-79l20.4, transcript variant X3
27. prdm16 prdm16 1346 1.629 - - - - - - 0.736 0.893 -
28. ube2i ube2i 13024 1.624 - - - - - - 0.750 0.874 -
29. nop58 ENSDARG00000104353 8497 1.62 - - - - - - 0.909 - 0.711 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
30. mrpl40 ENSDARG00000043554 2198 1.619 - 0.838 - - - - 0.781 - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
31. casc4 ENSDARG00000074490 2019 1.618 - 0.707 - - - - - 0.911 - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
32. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.613 - - - - - - - 0.889 0.724 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
33. abcf1 ENSDARG00000031795 8635 1.595 - - - - - 0.844 0.751 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
34. acin1b ENSDARG00000026842 3806 1.588 - - - - - 0.756 - 0.832 - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
35. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.583 - 0.778 - - - - 0.805 - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
36. ppm1g ENSDARG00000075559 6516 1.582 - 0.743 - - - - - 0.839 - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
37. lysmd3 ENSDARG00000024693 754 1.581 - 0.853 0.728 - - - - - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
38. alas1 ENSDARG00000021059 4892 1.578 - - - - - - 0.746 0.832 - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
39. kntc1 ENSDARG00000101670 859 1.576 - - - 0.758 - 0.818 - - - kinetochore associated 1 [Source:ZFIN;Acc:ZDB-GENE-050208-92]
40. puf60a ENSDARG00000032175 5618 1.575 - 0.727 - - - - 0.848 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
41. polr2eb ENSDARG00000026183 2174 1.566 - - - - - 0.861 - - 0.705 polymerase (RNA) II (DNA directed) polypeptide E, b [Source:ZFIN;Acc:ZDB-GENE-040801-83]
42. foxj1a ENSDARG00000101919 1095 1.562 - - 0.767 - - - 0.795 - - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
43. wu:fb30e12 wu:fb30e12 1254 1.558 - 0.785 - - - - 0.773 - -
44. alg9 ENSDARG00000012840 631 1.558 - - - - - 0.701 0.857 - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
45. cwc22 ENSDARG00000014008 2385 1.547 - 0.835 - - - - - 0.712 - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
46. tfdp1a ENSDARG00000019293, ENSDARG00000111589 1118 1.545 - - - - - 0.845 0.700 - - transcription factor Dp-1, a [Source:ZFIN;Acc:ZDB-GENE-040426-2883]
47. myf5 ENSDARG00000007277 1051 1.545 - - - - 0.757 - 0.788 - - myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6]
48. dnaja2l ENSDARG00000010745 2367 1.545 - - - 0.710 - - - 0.835 - DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
49. prkrira 971 1.542 - - - - - 0.787 0.755 - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
50. zgc:66475 ENSDARG00000099519 1348 1.541 - 0.778 0.763 - - - - - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
51. lamb2l ENSDARG00000033950 952 1.541 - 0.812 - - - - 0.729 - - laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
52. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.539 - - - - 0.705 - 0.834 - -
53. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.535 - 0.735 - - - 0.800 - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
54. utp18 ENSDARG00000102618 1983 1.532 - - - - - 0.762 0.770 - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
55. plcg1 ENSDARG00000038442 5324 1.529 - - 0.754 - - - 0.775 - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
56. fam174b ENSDARG00000068709 1171 1.527 - 0.727 - - - - 0.800 - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]
57. samm50 ENSDARG00000045814 4511 1.511 - 0.736 - - - - - 0.775 - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
58. hsf1 ENSDARG00000008818 491 1.511 - 0.760 0.751 - - - - - - heat shock transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-16]
59. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.509 - 0.717 - - - - 0.792 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
60. lypla2 ENSDARG00000053656 8971 1.507 - 0.708 - - - - 0.799 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
61. h2afva ENSDARG00000068820 16427 1.506 - - - 0.769 - - 0.737 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
62. fen1 ENSDARG00000011404 3358 1.505 - - - - - - 0.733 - 0.772 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
63. fam135a ENSDARG00000059843 2352 1.504 - 0.733 - - - - 0.771 - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
64. synj1 ENSDARG00000025011, ENSDARG00000110664, ENSDARG00000111319 542 1.502 - 0.721 - - - - 0.781 - - synaptojanin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9180]
65. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.501 - - - - - 0.762 0.739 - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
66. sdf2l1 ENSDARG00000035631 615 1.5 - - 0.767 - - 0.733 - - - stromal cell-derived factor 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-46]
67. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 1.498 - 0.772 - - - - 0.726 - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
68. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.497 - - 0.709 - - - 0.788 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
69. aff2 ENSDARG00000052242 540 1.495 - 0.790 - - - 0.705 - - - AF4/FMR2 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-190]
70. sumo3b ENSDARG00000035993 3414 1.489 - - - 0.753 - - 0.736 - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
71. mrps25 ENSDARG00000041306 3654 1.484 - - 0.756 - - - 0.728 - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
72. pak2b ENSDARG00000018476 4331 1.482 - 0.745 - - - - 0.737 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
73. polr1d ENSDARG00000037570 860 1.478 - 0.706 0.772 - - - - - - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
74. smg5 ENSDARG00000041481 1286 1.473 - 0.759 - - - - - - 0.714 SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
75. fam63a 381 1.471 - 0.752 - - 0.719 - - - - family with sequence similarity 63, member A, transcript variant X1
76. espl1 ENSDARG00000075354 818 1.465 - - - 0.721 - - 0.744 - - extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
77. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.462 - - - - - 0.756 - - 0.706 ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
78. cyp2p10 ENSDARG00000042990 176 1.458 - - - - - 0.720 0.738 - - cytochrome P450, family 2, subfamily P, polypeptide 10 [Source:ZFIN;Acc:ZDB-GENE-040120-1]
79. ccdc92 ENSDARG00000041750, ENSDARG00000115475 283 1.455 - 0.738 - - - - 0.717 - - coiled-coil domain containing 92 [Source:ZFIN;Acc:ZDB-GENE-051113-120]
80. sumo3a ENSDARG00000028119 13447 1.452 - - - 0.725 - - 0.727 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
81. krcp ENSDARG00000040224 5961 1.447 - - - 0.701 - 0.746 - - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
82. trip13 ENSDARG00000025043 796 1.445 - 0.741 - 0.704 - - - - - thyroid hormone receptor interactor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1488]
83. SYDE2 ENSDARG00000099479 1891 1.445 - - 0.722 - - 0.723 - - - synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
84. CU596012.2 CU596012.2 1046 1.441 - 0.706 - - - - 0.735 - -
85. yme1l1a ENSDARG00000075192 2634 1.441 - 0.718 - - - - 0.723 - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
86. TTL ENSDARG00000062418 3043 1.438 - - - - - - 0.737 - 0.701 tubulin tyrosine ligase [Source:ZFIN;Acc:ZDB-GENE-060929-608]
87. C5H11orf88 C5H11orf88 280 1.415 - 0.708 - - - - 0.707 - -
88. znf292b ENSDARG00000043973 3791 1.404 - - - - - 0.701 0.703 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
89. rnmt ENSDARG00000070553 1743 1.402 - - - 0.700 - 0.702 - - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
90. DVL3 1098 0.996 - - - - - - - 0.996 - dishevelled segment polarity protein 3
91. ift20 ENSDARG00000040556 285 0.994 - - - - - - - 0.994 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
92. chd5 ENSDARG00000105083 132 0.993 - - - - - - - 0.993 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
93. ZNF784_2 ZNF784_2 181 0.993 - - - - - - - 0.993 -
94. si:ch211-195b13.1 ENSDARG00000016623 427 0.993 - - - - - - - 0.993 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
95. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.993 - - - - - - - 0.993 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
96. KIRREL3 ENSDARG00000115903 206 0.993 - - - - - - - 0.993 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
97. psmd5 ENSDARG00000059046 622 0.993 - - - - - - - 0.993 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
98. DEDD ENSDARG00000029783 530 0.993 - - - - - - - 0.993 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
99. xkr6 xkr6 286 0.993 - - - - - - - 0.993 -
100. eef1a1a ENSDARG00000039502 234 0.993 - - - - - - - 0.993 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]

There are 1375 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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