Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ift172

Gene Name Gene ID Reads Annotation
ift172 ENSDARG00000041870 1239 intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]










Genes with expression patterns similar to ift172

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ift172 ENSDARG00000041870 1239 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]
2. ccnf ENSDARG00000105046 1790 2.425 - 0.798 - - - - 0.715 0.912 - cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
3. manea ENSDARG00000001898 450 2.348 0.704 - - - - 0.775 - 0.869 - mannosidase, endo-alpha [Source:ZFIN;Acc:ZDB-GENE-040912-87]
4. dpf2 ENSDARG00000012219 666 2.325 - 0.738 - - - 0.760 - 0.827 - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
5. tefb ENSDARG00000098103 370 1.642 0.838 0.804 - - - - - - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
6. tbc1d10a tbc1d10a 462 1.634 - - - - - 0.780 - 0.854 -
7. wdr59 ENSDARG00000088817 1005 1.616 - 0.800 - - - - - 0.816 - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
8. sltm ENSDARG00000052728 6234 1.597 - - - - - - 0.838 0.759 - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
9. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.596 - - - - - - 0.799 0.797 - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
10. rpp30 ENSDARG00000027428 286 1.584 - - - - - 0.705 - 0.879 - ribonuclease P/MRP 30 subunit [Source:ZFIN;Acc:ZDB-GENE-050320-45]
11. rraga ENSDARG00000104149 515 1.584 0.707 - - - - - - 0.877 - Ras-related GTP binding A [Source:ZFIN;Acc:ZDB-GENE-030131-4083]
12. FP102801.1_1 FP102801.1_1 238 1.575 - 0.705 - - - - - 0.870 -
13. tubgcp4 ENSDARG00000005374 208 1.574 0.734 0.840 - - - - - - - tubulin, gamma complex associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-081022-124]
14. MAL_1 MAL_1 200 1.558 0.801 - - - - 0.757 - - -
15. srsf4 ENSDARG00000105293 9657 1.553 - 0.799 - - - - 0.754 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
16. taf5 ENSDARG00000018325 1363 1.553 - - - - - 0.838 0.715 - - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
17. gba2 ENSDARG00000061472 171 1.552 0.797 0.755 - - - - - - - glucosidase, beta (bile acid) 2 [Source:ZFIN;Acc:ZDB-GENE-070522-3]
18. zgc:194469 ENSDARG00000104367 93 1.552 - 0.759 - - - 0.793 - - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
19. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.549 - - - - - - 0.804 0.745 - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
20. MATR3 MATR3 3962 1.549 - - - - - - 0.751 0.798 -
21. si:ch211-281g2.4 si:ch211-281g2.4 121 1.548 0.782 - - - - - - 0.766 -
22. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 1.546 - 0.758 - - - - - 0.788 - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
23. CR925880.1 CR925880.1 196 1.542 - 0.710 - - - - - 0.832 -
24. TAF4 TAF4 658 1.538 0.822 - - - - 0.716 - - -
25. nedd1 ENSDARG00000013472 209 1.535 0.741 0.794 - - - - - - - neural precursor cell expressed, developmentally down-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2906]
26. gpr160 ENSDARG00000038700 57 1.535 0.790 0.745 - - - - - - - G protein-coupled receptor 160 [Source:ZFIN;Acc:ZDB-GENE-081022-189]
27. rab20 ENSDARG00000005049 346 1.534 - 0.780 - - - - 0.754 - - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
28. trim71 ENSDARG00000075593 2750 1.524 - 0.778 - - - - 0.746 - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
29. FBXO46 ENSDARG00000099814 722 1.517 - - - - - 0.760 0.757 - - F-box protein 46 [Source:HGNC Symbol;Acc:HGNC:25069]
30. sass6 ENSDARG00000058346 225 1.503 0.797 - - - - 0.706 - - - SAS-6 centriolar assembly protein [Source:ZFIN;Acc:ZDB-GENE-040426-2784]
31. vamp1 ENSDARG00000031283 3094 1.497 - 0.756 - - - - - 0.741 - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
32. RABL6 RABL6 1795 1.487 - - - - - 0.711 0.776 - -
33. gemin8 ENSDARG00000053496, ENSDARG00000115240 1214 1.484 - - - - - 0.730 0.754 - - gem (nuclear organelle) associated protein 8 [Source:ZFIN;Acc:ZDB-GENE-041114-189]
34. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 1.474 - 0.771 - - - - - - 0.703 insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
35. ror1 ENSDARG00000015176 378 1.469 0.729 - - - - 0.740 - - - receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
36. ctdp1 ENSDARG00000017522 731 1.468 - 0.757 - - - 0.711 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040720-1]
37. fbxo5 ENSDARG00000039020 1284 1.467 - - - - 0.703 - - 0.764 - F-box protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4027]
38. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.457 0.716 - - - - - 0.741 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
39. wbp2 ENSDARG00000056605 101 1.454 - 0.700 - - - 0.754 - - - WW domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-137]
40. CABZ01092303.1 CABZ01092303.1 8825 1.452 - - - - - 0.716 0.736 - -
41. dkc1 ENSDARG00000016484 7088 1.451 - - - - - - 0.724 0.727 - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
42. TPMT_1 TPMT_1 214 1.445 0.745 - - - - - 0.700 - -
43. ctnnb1 ENSDARG00000014571 12004 1.436 - 0.703 - - - 0.733 - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
44. col6a6 col6a6 1165 1.435 0.712 - - - - 0.723 - - -
45. Sep-07 Sep-07 1827 1.429 - - - - - - 0.706 0.723 -
46. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.419 - 0.716 - - - - 0.703 - - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
47. TRAPPC8 ENSDARG00000038866 1343 1.418 0.703 - - - - - 0.715 - - trafficking protein particle complex 8 [Source:ZFIN;Acc:ZDB-GENE-130530-601]
48. TBC1D24 ENSDARG00000069339 1300 1.402 0.702 - - - - 0.700 - - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
49. acsl4l acsl4l 540 0.933 0.933 - - - - - - - -
50. cdk5 ENSDARG00000056683 1998 0.905 - - - - - - 0.905 - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
51. gli2b ENSDARG00000020884 1468 0.9 - - - - - - - 0.900 - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
52. TMEM132E ENSDARG00000090830 1197 0.898 - - - - - - - 0.898 - transmembrane protein 132E [Source:ZFIN;Acc:ZDB-GENE-120926-3]
53. srrm2 ENSDARG00000037965 1967 0.896 - - - - - - - 0.896 - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
54. ndc80 ENSDARG00000071694 1162 0.896 - - - - - - - 0.896 - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
55. CEP152 ENSDARG00000075725 391 0.894 - 0.894 - - - - - - - centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
56. uncx4.1 ENSDARG00000037760 472 0.893 - - - - - - - 0.893 - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
57. LRCH1 ENSDARG00000078778 407 0.892 - 0.892 - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]
58. anapc15 ENSDARG00000101285 391 0.888 0.888 - - - - - - - - anaphase promoting complex subunit 15 [Source:ZFIN;Acc:ZDB-GENE-060825-43]
59. araf ENSDARG00000054533 1132 0.887 - - - - - - 0.887 - - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
60. ubr4 ENSDARG00000009549 5565 0.887 - - - - - - - 0.887 - ubiquitin protein ligase E3 component n-recognin 4 [Source:ZFIN;Acc:ZDB-GENE-090313-341]
61. tmem141 ENSDARG00000101963 513 0.887 - - - - - - - 0.887 - transmembrane protein 141 [Source:ZFIN;Acc:ZDB-GENE-060929-272]
62. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 0.885 - - - - - - - 0.885 - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
63. pnp5b ENSDARG00000099802 551 0.884 - - - - - - - 0.884 - purine nucleoside phosphorylase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-54]
64. CABZ01067945.1 CABZ01067945.1 469 0.884 - - - - - - - 0.884 -
65. rgs20 ENSDARG00000038859 331 0.884 - - - - - - - 0.884 - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
66. msi2a ENSDARG00000033901, ENSDARG00000114442 256 0.882 - - - - - - - 0.882 - musashi RNA-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030826-25]
67. mcfd2 ENSDARG00000039757, ENSDARG00000109631, ENSDARG00000116502 1804 0.882 - - - - - 0.882 - - - multiple coagulation factor deficiency 2 [Source:ZFIN;Acc:ZDB-GENE-041010-8]
68. myo6a ENSDARG00000044016 847 0.881 - - - - - - - 0.881 - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
69. arl13b ENSDARG00000012763 458 0.881 - - - - - - - 0.881 - ADP-ribosylation factor-like 13b [Source:ZFIN;Acc:ZDB-GENE-021217-3]
70. tvp23b ENSDARG00000057060 361 0.88 - - - - - - - 0.880 - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
71. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 0.879 - - - - - - - 0.879 - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
72. GIGYF1 1830 0.879 - - - - - - - 0.879 - GRB10 interacting GYF protein 1, transcript variant X6
73. ercc6 ENSDARG00000075612 1175 0.879 - - - - - - - 0.879 - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
74. pak1ip1 ENSDARG00000044488 1995 0.879 - - - - - - - 0.879 - PAK1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8414]
75. med23 ENSDARG00000029157 4453 0.878 - - - - - - - 0.878 - mediator complex subunit 23 [Source:ZFIN;Acc:ZDB-GENE-040724-82]
76. pim3 ENSDARG00000055129 1517 0.878 0.878 - - - - - - - - Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]
77. megf8_1 ENSDARG00000079751, ENSDARG00000103934 722 0.877 - - - - - - - 0.877 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
78. HIP1R HIP1R 490 0.876 - - - - - - 0.876 - -
79. zfand2a ENSDARG00000103511 829 0.875 0.875 - - - - - - - - zinc finger, AN1-type domain 2A [Source:ZFIN;Acc:ZDB-GENE-040426-1596]
80. SPAG5 SPAG5 1117 0.875 - 0.875 - - - - - - -
81. rxfp2b ENSDARG00000019660 464 0.875 - - - - - - - 0.875 - relaxin family peptide receptor 2b [Source:ZFIN;Acc:ZDB-GENE-110408-27]
82. C3H19orf52 C3H19orf52 541 0.874 - - - - - - - 0.874 -
83. decr2 ENSDARG00000045257 603 0.874 - - - - - - - 0.874 - 2,4-dienoyl CoA reductase 2, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-040426-2612]
84. zgc:113336 ENSDARG00000104078 147 0.874 - - - - - - - 0.874 - zgc:113336 [Source:ZFIN;Acc:ZDB-GENE-050320-55]
85. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 0.874 - - - - - - - 0.874 - ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
86. ftr29 ENSDARG00000075355 172 0.873 0.873 - - - - - - - - finTRIM family, member 29 [Source:ZFIN;Acc:ZDB-GENE-050417-159]
87. rab6bb ENSDARG00000031343 1381 0.873 - 0.873 - - - - - - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
88. smarca2 ENSDARG00000008904, ENSDARG00000115738 644 0.872 - - - - - - - 0.872 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]
89. myo16 ENSDARG00000078582 714 0.872 - - - - - - - 0.872 - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
90. TTC31 TTC31 1088 0.871 - - - - - - - 0.871 -
91. usp54a ENSDARG00000077948, ENSDARG00000112037 406 0.871 - 0.871 - - - - - - - ubiquitin specific peptidase 54a [Source:ZFIN;Acc:ZDB-GENE-090828-2]
92. ppm1ab ENSDARG00000043250 772 0.871 - 0.871 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
93. APBA3 APBA3 852 0.87 - - - - - - - 0.870 -
94. ADCYAP1R1 ADCYAP1R1 118 0.87 - - - - - - - 0.870 -
95. UNKL ENSDARG00000037838 1086 0.87 - - - - - - - 0.870 - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
96. map7d1b ENSDARG00000104701 1655 0.869 - - - - - - - 0.869 - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
97. FGD5 FGD5 250 0.869 - - - - - - - 0.869 -
98. tfdp1a ENSDARG00000019293, ENSDARG00000111589 1118 0.869 - - - - - - - 0.869 - transcription factor Dp-1, a [Source:ZFIN;Acc:ZDB-GENE-040426-2883]
99. C9H2orf69 C9H2orf69 148 0.869 - - - - - - - 0.869 -
100. dennd1b ENSDARG00000101868 328 0.869 - 0.869 - - - - - - - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]

There are 1308 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA