Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ift140

Gene Name Gene ID Reads Annotation
ift140 ENSDARG00000031886 573 intraflagellar transport 140 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040724-165]










Genes with expression patterns similar to ift140

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ift140 ENSDARG00000031886 573 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intraflagellar transport 140 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040724-165]
2. efcab2 ENSDARG00000074323 88 3.095 - - - 0.719 - 0.703 0.778 0.895 - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
3. e2f5 ENSDARG00000038812 388 1.893 - - - - 0.999 - - 0.894 - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
4. si:ch211-132g1.3 ENSDARG00000089477 769 1.742 - - - - 0.998 - 0.744 - - si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
5. asah1a ENSDARG00000037091, ENSDARG00000112187 390 1.728 - 0.729 - - 0.999 - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
6. zgc:73340 823 1.703 - - - - - 0.841 - 0.862 - zgc:73340
7. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 1.673 - - - 0.719 0.954 - - - - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
8. CU683898.1 CU683898.1 203 1.634 - - - 0.727 - - - 0.907 -
9. wdr24 ENSDARG00000025507 505 1.631 - 0.746 - - - - - 0.885 - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
10. EMILIN3 1347 1.597 - - - 0.770 - - - 0.827 - elastin microfibril interfacer 3
11. klhl42 ENSDARG00000006011 46 1.586 - - - 0.716 - - - 0.870 - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
12. emilin3a ENSDARG00000078052 1652 1.577 - - - 0.728 - - - 0.849 - elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
13. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 1.562 - - - 0.706 - - - 0.856 - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
14. med30 ENSDARG00000101115 133 1.562 - - - - - 0.734 - 0.828 - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
15. dact2 ENSDARG00000056986 1121 1.559 - 0.826 - - - - 0.733 - - dishevelled-binding antagonist of beta-catenin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9975]
16. knstrn ENSDARG00000074379 374 1.555 - - - - - - 0.732 0.823 - kinetochore localized astrin (SPAG5) binding protein [Source:ZFIN;Acc:ZDB-GENE-081022-187]
17. gstz1 ENSDARG00000027984 278 1.545 - - - - - 0.718 - 0.827 - glutathione S-transferase zeta 1 [Source:ZFIN;Acc:ZDB-GENE-040718-184]
18. MEX3C 476 1.536 - - - 0.749 - - 0.787 - - mex-3 RNA binding family member C
19. ERCC6L2 ENSDARG00000012403 236 1.526 - - - 0.788 - - 0.738 - - excision repair cross-complementation group 6-like 2 [Source:ZFIN;Acc:ZDB-GENE-110411-274]
20. C5H4orf22 C5H4orf22 117 1.52 - - - 0.762 - - - 0.758 -
21. fos fos 817 1.513 - - - 0.718 - - - 0.795 -
22. si:ch211-102c2.8 ENSDARG00000093823 168 1.508 - - - 0.705 - - 0.803 - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
23. CCDC114 ENSDARG00000015010 190 1.501 - - - - - - 0.792 0.709 - coiled-coil domain containing 114 [Source:ZFIN;Acc:ZDB-GENE-041114-110]
24. CABZ01102039.1 ENSDARG00000076357 273 1.493 - 0.708 - 0.785 - - - - -
25. efhc2 ENSDARG00000004204 59 1.485 - - - 0.701 - - 0.784 - - EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]
26. CR387997.1 CR387997.1 190 1.474 - - - - - - 0.734 0.740 -
27. cln8 ENSDARG00000075525, ENSDARG00000113042 601 1.46 - - - 0.708 - - 0.752 - - CLN8, transmembrane ER and ERGIC protein [Source:ZFIN;Acc:ZDB-GENE-060906-3]
28. med21 ENSDARG00000026839 1083 1.456 - 0.715 - 0.741 - - - - - mediator complex subunit 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2763]
29. poc5 ENSDARG00000059982 569 1.447 - - - 0.730 - 0.717 - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
30. C19H1orf51 C19H1orf51 1776 1.442 - 0.725 - - - - 0.717 - -
31. ccdc151 ENSDARG00000062978, ENSDARG00000113033 316 1.428 - - - 0.716 - - 0.712 - - coiled-coil domain containing 151 [Source:ZFIN;Acc:ZDB-GENE-061013-787]
32. ttc12 ENSDARG00000056896 97 1.423 - - - 0.708 - - 0.715 - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
33. dnaaf1 ENSDARG00000012030 58 1.423 - - - 0.715 - 0.708 - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
34. pigu ENSDARG00000075530 348 1.42 0.717 - - - - - 0.703 - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
35. MEX3D MEX3D 293 0.999 - - - - 0.999 - - - -
36. ZBTB22 ZBTB22 1053 0.999 - - - - 0.999 - - - -
37. TIMM21 ENSDARG00000071594 722 0.999 - - - - 0.999 - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
38. d2hgdh ENSDARG00000060210 362 0.999 - - - - 0.999 - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
39. si:ch211-223a21.1 ENSDARG00000098892 306 0.999 - - - - 0.999 - - - - si:ch211-223a21.1 [Source:ZFIN;Acc:ZDB-GENE-110913-137]
40. rad50 ENSDARG00000038917 1105 0.998 - - - - 0.998 - - - - RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
41. CCDC106 CCDC106 1908 0.998 - - - - 0.998 - - - -
42. zgc:66443 ENSDARG00000057707 624 0.998 - - - - 0.998 - - - - zgc:66443 [Source:ZFIN;Acc:ZDB-GENE-040426-2945]
43. drgx ENSDARG00000069329 610 0.998 - - - - 0.998 - - - - dorsal root ganglia homeobox [Source:ZFIN;Acc:ZDB-GENE-070330-1]
44. rc3h1 rc3h1 1087 0.998 - - - - 0.998 - - - -
45. sptlc2a ENSDARG00000018976 937 0.998 - - - - 0.998 - - - - serine palmitoyltransferase, long chain base subunit 2a [Source:ZFIN;Acc:ZDB-GENE-050522-23]
46. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 0.998 - - - - 0.998 - - - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
47. grasp ENSDARG00000000588, ENSDARG00000113330 766 0.997 - - - - 0.997 - - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
48. cicb ENSDARG00000055502 1356 0.997 - - - - 0.997 - - - - capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
49. cdc26 ENSDARG00000077815, ENSDARG00000115575 1460 0.997 - - - - 0.997 - - - - cell division cycle 26 homolog [Source:ZFIN;Acc:ZDB-GENE-040822-18]
50. ftsjd2 ftsjd2 2694 0.997 - - - - 0.997 - - - -
51. C7H4orf48 C7H4orf48 1455 0.997 - - - - 0.997 - - - -
52. scocb ENSDARG00000002217 1844 0.997 - - - - 0.997 - - - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
53. SRR SRR 544 0.997 - - - - 0.997 - - - -
54. parp12b ENSDARG00000057974, ENSDARG00000115844 1435 0.997 - - - - 0.997 - - - - poly (ADP-ribose) polymerase family, member 12b [Source:ZFIN;Acc:ZDB-GENE-030131-2617]
55. CABZ01076275.1 ENSDARG00000100753 5137 0.997 - - - - 0.997 - - - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
56. ppm1la ENSDARG00000063218 2142 0.997 - - - - 0.997 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
57. rnf185 ENSDARG00000032997 1490 0.997 - - - - 0.997 - - - - ring finger protein 185 [Source:ZFIN;Acc:ZDB-GENE-040426-1977]
58. hsf2 ENSDARG00000053097 1188 0.997 - - - - 0.997 - - - - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
59. dgkh ENSDARG00000018716 795 0.996 - - - - 0.996 - - - - diacylglycerol kinase, eta [Source:ZFIN;Acc:ZDB-GENE-070912-328]
60. lppr3a lppr3a 1294 0.996 - - - - 0.996 - - - -
61. TANC2 TANC2 1104 0.996 - - - - 0.996 - - - -
62. dbx2 2971 0.996 - - - - 0.996 - - - - developing brain homeobox 2
63. aclya ENSDARG00000099079 2324 0.996 - - - - 0.996 - - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
64. pik3r1 ENSDARG00000038524 3615 0.996 - - - - 0.996 - - - - phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-1280]
65. chd2 ENSDARG00000060687 3832 0.996 - - - - 0.996 - - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
66. ttc14 ENSDARG00000013845 1192 0.996 - - - - 0.996 - - - - tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
67. kidins220b ENSDARG00000017338 1937 0.995 - - - - 0.995 - - - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
68. MAP4_1 MAP4_1 1153 0.995 - - - - 0.995 - - - -
69. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 0.995 - - - - 0.995 - - - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
70. acvr1b acvr1b 2963 0.995 - - - - 0.995 - - - -
71. rhot1a ENSDARG00000099996 2059 0.995 - - - - 0.995 - - - - ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
72. zfand1 ENSDARG00000009178, ENSDARG00000114617 1192 0.995 - - - - 0.995 - - - - zinc finger, AN1-type domain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-269]
73. slc35d2 ENSDARG00000089837 1606 0.995 - - - - 0.995 - - - - solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 [Source:ZFIN;Acc:ZDB-GENE-080125-1]
74. pold1 ENSDARG00000027689 1148 0.995 - - - - 0.995 - - - - polymerase (DNA directed), delta 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060429-1]
75. e2f7 ENSDARG00000008986 1439 0.994 - - - - 0.994 - - - - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
76. cercam ENSDARG00000079049, ENSDARG00000109573 2228 0.994 - - - - 0.994 - - - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
77. slc2a3a ENSDARG00000013295 2449 0.994 - - - - 0.994 - - - - solute carrier family 2 (facilitated glucose transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-040718-390]
78. pou2f1b ENSDARG00000007996 2172 0.994 - - - - 0.994 - - - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
79. desi2 ENSDARG00000004460 1593 0.994 - - - - 0.994 - - - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
80. sdad1 ENSDARG00000105117 2819 0.994 - - - - 0.994 - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
81. uap1 ENSDARG00000052170 1168 0.994 - - - - 0.994 - - - - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1233]
82. anapc10 ENSDARG00000090152 1406 0.994 - - - - 0.994 - - - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
83. pdcd6ip ENSDARG00000025269 2522 0.993 - - - - 0.993 - - - - programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
84. rbms1a ENSDARG00000074023 2742 0.993 - - - - 0.993 - - - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
85. pdia4 ENSDARG00000018491 1914 0.993 - - - - 0.993 - - - - protein disulfide isomerase family A, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5493]
86. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 0.993 - - - - 0.993 - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
87. pmm2 ENSDARG00000037654 1783 0.993 - - - - 0.993 - - - - phosphomannomutase 2 [Source:ZFIN;Acc:ZDB-GENE-030722-6]
88. mpp6b ENSDARG00000029761 2142 0.992 - - - - 0.992 - - - - membrane protein, palmitoylated 6b (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-040426-775]
89. rbm28 ENSDARG00000025332 2685 0.992 - - - - 0.992 - - - - RNA binding motif protein 28 [Source:ZFIN;Acc:ZDB-GENE-040426-960]
90. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 0.992 - - - - 0.992 - - - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
91. stm ENSDARG00000035694 1567 0.992 - - - - 0.992 - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
92. cdk6 ENSDARG00000070228 1778 0.991 - - - - 0.991 - - - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
93. MAPRE2 ENSDARG00000099943 3041 0.991 - - - - 0.991 - - - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
94. cers5 ENSDARG00000002365 2540 0.991 - - - - 0.991 - - - - ceramide synthase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1740]
95. RNF38 ENSDARG00000062055 3901 0.99 - - - - 0.990 - - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
96. tubg1 ENSDARG00000015610 2433 0.99 - - - - 0.990 - - - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
97. bysl ENSDARG00000001057 2621 0.99 - - - - 0.990 - - - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
98. chrac1 ENSDARG00000042337 2590 0.989 - - - - 0.989 - - - - chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
99. cand1 ENSDARG00000017841 8164 0.989 - - - - 0.989 - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
100. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 0.988 - - - - 0.988 - - - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]

There are 902 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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