Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ifrd1

Gene Name Gene ID Reads Annotation
ifrd1 ENSDARG00000068708 2858 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]










Genes with expression patterns similar to ifrd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ifrd1 ENSDARG00000068708 2858 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
2. 5S_rRNA_21 5S_rRNA_21 1323 2.672 - - - - 0.985 0.774 - - 0.913
3. rpz5 ENSDARG00000075718 1703 2.419 - 0.754 - - - 0.744 0.921 - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
4. VPS37B_1 VPS37B_1 1816 1.955 - - - - 0.987 - 0.968 - -
5. RNF111 ENSDARG00000078802 1357 1.953 - - - - 0.991 - 0.962 - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
6. kcnq5a ENSDARG00000069954 492 1.932 - - - - 0.992 - - - 0.940 potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
7. bin2b ENSDARG00000010255 2649 1.927 - - - - 0.991 - 0.936 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
8. nrg2a ENSDARG00000077818 854 1.926 - - - - 0.991 - 0.935 - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
9. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.926 - - - - 0.986 - 0.940 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
10. TAF2 ENSDARG00000102307 1401 1.921 - - - - - - 0.956 - 0.965 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
11. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.904 - - - - - - 0.958 - 0.946 RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
12. dnttip2 ENSDARG00000057648 2381 1.898 - - - - 0.951 - 0.947 - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
13. dhdds ENSDARG00000039851 1135 1.889 - - - - - - 0.942 - 0.947 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
14. ARID3A ENSDARG00000070843 1613 1.888 - - - - 0.985 - - - 0.903 AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
15. ttc1 ENSDARG00000044567 1141 1.881 - - - - - - 0.935 - 0.946 tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
16. ik ENSDARG00000004161 3132 1.868 - - - - - - 0.949 - 0.919 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
17. sox5 ENSDARG00000011582 3632 1.868 - - - - 0.938 - - - 0.930 SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
18. smurf1 ENSDARG00000016086 878 1.862 - - - - - - 0.956 - 0.906 SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
19. gde1 ENSDARG00000055108, ENSDARG00000110855 1261 1.855 - - - - - - 0.952 - 0.903 glycerophosphodiester phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-881]
20. mmp16a 1128 1.854 - - - - - - 0.942 - 0.912 matrix metallopeptidase 16a (membrane-inserted)
21. cpsf1 ENSDARG00000034178 2036 1.85 - - - - - - 0.927 - 0.923 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
22. NDUFA3 ENSDARG00000041400 7939 1.841 - - - - 0.961 - 0.880 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
23. pes ENSDARG00000018902 3286 1.829 - - - - - - 0.951 - 0.878 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
24. tm9sf4 ENSDARG00000002536 1684 1.825 - - - - 0.958 - - - 0.867 transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
25. cwc22 ENSDARG00000014008 2385 1.824 - - - - 0.979 - - - 0.845 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
26. spata13 ENSDARG00000062837 5330 1.801 - 0.860 - - 0.941 - - - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
27. gstal gstal 1865 1.794 - - - - - - 0.947 - 0.847
28. ptdss1 ptdss1 1143 1.794 - 0.806 - - 0.988 - - - -
29. gmps ENSDARG00000079848 8217 1.79 - - - - 0.839 - 0.951 - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
30. cltcb ENSDARG00000090716 5544 1.787 - - - - 0.968 - - - 0.819 clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
31. armc1l ENSDARG00000020887 1219 1.776 - 0.830 - - - - 0.946 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
32. galnt7 ENSDARG00000057303 2017 1.757 - 0.771 - - 0.986 - - - - UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-284]
33. keap1b ENSDARG00000074634 1513 1.75 - 0.770 - - 0.980 - - - - kelch-like ECH-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-080508-1]
34. ap1b1 ENSDARG00000020621 3874 1.748 - 0.800 - - - - 0.948 - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
35. clptm1l ENSDARG00000021048 1234 1.748 - 0.808 - - - - 0.940 - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
36. nfyba ENSDARG00000039185 1804 1.744 - - - - 0.977 - - 0.767 - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
37. ubap2l ENSDARG00000063219 1147 1.742 - 0.782 - - - - 0.960 - - ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
38. mapk7 ENSDARG00000023110 455 1.732 - 0.768 - - - - - - 0.964 mitogen-activated protein kinase 7 [Source:ZFIN;Acc:ZDB-GENE-050320-10]
39. apmap ENSDARG00000017422 2692 1.72 - - - - - 0.856 - - 0.864 adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
40. phf2 ENSDARG00000018691 3341 1.718 - - - - 0.980 - - 0.738 - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
41. slc35c2 ENSDARG00000037517, ENSDARG00000114428 3644 1.715 - - - - 0.964 - 0.751 - - solute carrier family 35 (GDP-fucose transporter), member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]
42. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.713 - - - - 0.958 - - - 0.755 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
43. snrpe ENSDARG00000033175 7462 1.712 - - - - 0.980 0.732 - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
44. SLITRK6 ENSDARG00000098769 217 1.708 - 0.775 - - - - 0.933 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
45. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.707 - - - - 0.953 - - - 0.754 staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
46. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.706 - 0.771 - - - - 0.935 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
47. gnb1b_1 ENSDARG00000104372 3728 1.706 - - - - - 0.747 0.959 - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
48. zgc:66014 817 1.706 - 0.753 - - - - 0.953 - - zgc:66014, transcript variant X6
49. si:dkey-193p11.2 ENSDARG00000096712 3500 1.704 0.767 - - - - - 0.937 - - si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
50. cope ENSDARG00000018562 17276 1.704 - - - - 0.736 - 0.968 - - coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
51. GANAB_1 GANAB_1 685 1.7 - 0.741 - - - - - - 0.959
52. cdc42ep1b ENSDARG00000077792 1569 1.699 - 0.748 - - - - 0.951 - - CDC42 effector protein (Rho GTPase binding) 1b [Source:ZFIN;Acc:ZDB-GENE-120215-219]
53. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.698 - 0.753 - - - - 0.945 - - ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
54. stam2 ENSDARG00000005318 2980 1.697 - - - - 0.977 0.720 - - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
55. dennd5b ENSDARG00000003789 1152 1.697 - - - - - 0.749 0.948 - - DENN/MADD domain containing 5B [Source:ZFIN;Acc:ZDB-GENE-030131-2248]
56. arpc1a ENSDARG00000008383 7353 1.692 - 0.727 - - 0.965 - - - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
57. ndufa6 ENSDARG00000038028 2653 1.691 - - - - - - 0.886 - 0.805 NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
58. slc16a8 ENSDARG00000045153 478 1.688 - 0.734 - - - - - - 0.954 solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
59. metrnl 1042 1.688 - 0.815 - - - - - - 0.873 meteorin, glial cell differentiation regulator-like
60. uhrf1 ENSDARG00000103409 3282 1.684 - - - - - - 0.951 - 0.733 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
61. NBEAL1 ENSDARG00000099547 1112 1.684 - 0.734 - - - - 0.950 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
62. srek1ip1 ENSDARG00000043728 985 1.682 - 0.760 - - - - - - 0.922 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
63. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.681 - - - - 0.975 0.706 - - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
64. spast ENSDARG00000024933 557 1.677 - 0.740 - - - - - - 0.937 spastin [Source:ZFIN;Acc:ZDB-GENE-040426-2331]
65. EIF1B ENSDARG00000029445 5034 1.677 - - - - - 0.769 - - 0.908 eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
66. dusp2 ENSDARG00000098108 353 1.677 - 0.723 - - - - 0.954 - - dual specificity phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-188]
67. elovl1b ENSDARG00000103735 2783 1.676 - 0.809 - - - - 0.867 - - ELOVL fatty acid elongase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2755]
68. Mar-07 Mar-07 2926 1.676 - - - - - - 0.943 0.733 -
69. tmem181 ENSDARG00000045910 2288 1.675 0.719 - - - - - 0.956 - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
70. CACHD1 ENSDARG00000061590 1287 1.67 - 0.727 - - - - 0.943 - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
71. psmd7 ENSDARG00000102417 4732 1.667 - - - - - - 0.943 0.724 - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
72. ncoa6 ENSDARG00000071272 759 1.664 - - - - - 0.717 - - 0.947 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
73. safb ENSDARG00000020467 5608 1.664 - - - - - - 0.939 0.725 - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
74. snrpa ENSDARG00000018890 4593 1.661 - - - - 0.937 - - 0.724 - small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
75. UBE2D2 ENSDARG00000043484 11723 1.661 - - - - 0.768 - 0.893 - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-120312-1]
76. PSD PSD 367 1.659 0.726 - - - - - 0.933 - -
77. rcbtb1 ENSDARG00000036645 255 1.655 - 0.700 - - - - - - 0.955 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
78. abl1 ENSDARG00000035187 3553 1.655 - - - - - - 0.942 - 0.713 c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
79. atp6ap2 ENSDARG00000008735 5096 1.654 - - - - - 0.807 0.847 - - ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
80. sart1 ENSDARG00000005945 1832 1.652 - 0.851 - - - - - 0.801 - SART1, U4/U6.U5 tri-snRNP-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-422]
81. scinlb ENSDARG00000058348 1466 1.651 - 0.714 - - - - 0.937 - - scinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
82. actr10 ENSDARG00000038432 1598 1.65 - 0.713 - - - - 0.937 - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
83. snrnp70 ENSDARG00000077126 5921 1.65 - - - - - - 0.945 - 0.705 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
84. illr4 ENSDARG00000008075 164 1.649 - 0.716 - - - - 0.933 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
85. creg2 ENSDARG00000000666 643 1.648 - 0.701 - - - - - - 0.947 cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
86. RALGAPB ENSDARG00000088899 1456 1.642 - - - - - 0.816 - 0.826 - Ral GTPase activating protein, beta subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-130530-945]
87. hadh ENSDARG00000030765 3406 1.638 - - - - - 0.760 0.878 - - hydroxyacyl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040801-261]
88. evpla ENSDARG00000019808 7565 1.638 - - - - 0.922 - 0.716 - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
89. wdr45 ENSDARG00000090219 829 1.635 - - - - - 0.717 - - 0.918 WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
90. taf5 ENSDARG00000018325 1363 1.617 - - - - - 0.725 - - 0.892 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
91. nrp1a ENSDARG00000102153 4154 1.608 - - - - 0.840 - - - 0.768 neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
92. b3gnt3.3 ENSDARG00000093521 430 1.593 - 0.716 - - - - 0.877 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-12]
93. bzw2 ENSDARG00000035918 1502 1.592 - 0.717 - - - - 0.875 - - basic leucine zipper and W2 domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-746]
94. JHDM1D JHDM1D 2277 1.574 - 0.745 - - - - - - 0.829
95. aldh1l1 ENSDARG00000077004, ENSDARG00000114342 2113 1.57 - 0.781 - - - - 0.789 - - aldehyde dehydrogenase 1 family, member L1 [Source:ZFIN;Acc:ZDB-GENE-100519-4]
96. plagx ENSDARG00000036855 3768 1.56 - - - - - - - 0.776 0.784 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
97. usp4 ENSDARG00000014770 1684 1.542 - 0.800 - - - 0.742 - - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
98. acaa2 ENSDARG00000038881 2649 1.538 - 0.807 - - - - - - 0.731 acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
99. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.53 - - - - - 0.808 - - 0.722 YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
100. bag6 ENSDARG00000075892 3782 1.51 - - - - - 0.736 - - 0.774 BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]

There are 1761 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA