Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for idh3b

Gene Name Gene ID Reads Annotation
idh3b ENSDARG00000044753, ENSDARG00000110992 3965 isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]










Genes with expression patterns similar to idh3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
2. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 2.501 - 0.795 - - - - 0.726 - 0.980 synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
3. ndrg3a ENSDARG00000013087 5581 1.788 - - - - - - 0.799 - 0.989 ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
4. acap3a ENSDARG00000075990 9652 1.783 - - - - - - 0.797 - 0.986 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
5. sdhb ENSDARG00000075768 5493 1.772 - - - - - - 0.779 - 0.993 succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
6. RNF145 RNF145 1364 1.734 - 0.742 - - - - - - 0.992
7. samm50 ENSDARG00000045814 4511 1.723 - - - - - 0.737 - - 0.986 SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
8. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1.691 - 0.702 - - - - - - 0.989 protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
9. zgc:55512 zgc:55512 4436 1.69 - - - - - 0.709 - - 0.981
10. arpc3 ENSDARG00000057882 10113 1.662 - 0.752 - - - - - - 0.910 actin related protein 2/3 complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040625-107]
11. atp5d 20825 1.614 - - - - - 0.710 - - 0.904 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
12. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.579 - 0.786 - - - 0.793 - - -
13. mtx2 ENSDARG00000029415 2205 1.539 - 0.812 - - - - 0.727 - - metaxin 2 [Source:ZFIN;Acc:ZDB-GENE-021210-2]
14. ppp2r2d ENSDARG00000102009 5710 1.521 - 0.775 - - - 0.746 - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
15. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 1.521 - 0.737 - - - - 0.784 - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
16. pdlim4 ENSDARG00000068973 2567 1.519 - 0.780 - - - 0.739 - - - PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
17. atpif1a 6030 1.509 - - - - - 0.734 0.775 - - ATPase inhibitory factor 1a
18. pxk ENSDARG00000063195 851 1.502 - 0.724 - - - 0.778 - - - PX domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050208-393]
19. lemd3 ENSDARG00000015824 2868 1.489 - - - - - 0.749 0.740 - - LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
20. epb41l4a ENSDARG00000040087 1013 1.485 - - - - - 0.728 0.757 - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
21. irf2bp2a ENSDARG00000004702 6719 1.48 - 0.704 - - - - 0.776 - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
22. mycbp ENSDARG00000091001 1511 1.478 - - - - - 0.761 0.717 - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
23. eif3g ENSDARG00000016889 10367 1.472 - - - - - 0.746 0.726 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
24. LGR4 ENSDARG00000060542 1222 1.472 - - - - - 0.748 0.724 - - leucine-rich repeat containing G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-111013-1]
25. nhp2 ENSDARG00000069422 9925 1.472 - - - - - 0.749 0.723 - - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
26. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 1.471 - 0.755 - - - - 0.716 - - HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
27. syf2 ENSDARG00000004706 2463 1.471 - 0.705 - - - - 0.766 - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
28. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.467 - - - - - 0.762 0.705 - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
29. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.465 - - - - - 0.731 0.734 - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
30. dido1 ENSDARG00000057940 3819 1.46 - - - - - 0.744 0.716 - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
31. fam13a ENSDARG00000075564 1905 1.454 - - - - - 0.745 0.709 - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
32. chmp1a ENSDARG00000102643 1078 1.453 - 0.733 - 0.720 - - - - - charged multivesicular body protein 1A [Source:ZFIN;Acc:ZDB-GENE-040426-1474]
33. lypla2 ENSDARG00000053656 8971 1.453 - 0.750 - - - - 0.703 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
34. UQCC2 ENSDARG00000011272 1337 1.453 - 0.729 - - - 0.724 - - - ubiquinol-cytochrome c reductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1726]
35. mfap2 ENSDARG00000059367 3774 1.452 - - - - - 0.704 0.748 - - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
36. nrp2a_1 ENSDARG00000096546 3358 1.451 - 0.728 - - - - 0.723 - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
37. ppap2b ppap2b 2900 1.451 - - - - - 0.722 0.729 - -
38. smc4 ENSDARG00000038882 4373 1.448 - - - - - 0.708 0.740 - - structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
39. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.433 - - - - - 0.719 0.714 - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
40. clcnk ENSDARG00000022560 355 1.43 0.711 0.719 - - - - - - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
41. tmx2b ENSDARG00000007786 3151 1.418 - 0.707 - - - - 0.711 - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
42. MRPL21 ENSDARG00000003846 3244 0.996 - - - - - - - - 0.996 mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
43. ARSJ ENSDARG00000077590 684 0.993 - - - - - - - - 0.993 arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
44. clpp ENSDARG00000020679 2125 0.993 - - - - - - - - 0.993 caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7860]
45. lin7a ENSDARG00000013414 1589 0.992 - - - - - - - - 0.992 lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
46. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.992 - - - - - - - - 0.992 Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
47. wrnip1 ENSDARG00000005218 695 0.992 - - - - - - - - 0.992 Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
48. RUNDC1 ENSDARG00000091962 693 0.992 - - - - - - - - 0.992 RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
49. ltv1 ENSDARG00000008490 2403 0.992 - - - - - - - - 0.992 LTV1 ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-040712-1]
50. fam49a ENSDARG00000006672 939 0.992 - - - - - - - - 0.992 family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
51. mterfd3 mterfd3 1004 0.992 - - - - - - - - 0.992
52. fam96b 2255 0.992 - - - - - - - - 0.992 family with sequence similarity 96, member B
53. ISCU ISCU 3648 0.992 - - - - - - - - 0.992
54. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 0.992 - - - - - - - - 0.992 carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
55. dis3l2 ENSDARG00000033259 1509 0.992 - - - - - - - - 0.992 DIS3 like 3'-5' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-070705-171]
56. kif2c ENSDARG00000076228 2281 0.992 - - - - - - - - 0.992 kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
57. dctn5 ENSDARG00000003573 1100 0.992 - - - - - - - - 0.992 dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
58. psmd4a ENSDARG00000101295 1410 0.992 - - - - - - - - 0.992 proteasome 26S subunit, non-ATPase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-104]
59. shfm1 7620 0.992 - - - - - - - - 0.992 split hand/foot malformation (ectrodactyly) type 1
60. zcchc9 ENSDARG00000007531 1748 0.992 - - - - - - - - 0.992 zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
61. AP3B1 2363 0.992 - - - - - - - - 0.992 adaptor related protein complex 3 beta 1 subunit
62. kctd1 ENSDARG00000074056 652 0.992 - - - - - - - - 0.992 potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
63. mboat2b ENSDARG00000042551 910 0.992 - - - - - - - - 0.992 membrane bound O-acyltransferase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-185]
64. C22H19orf70 C22H19orf70 4393 0.992 - - - - - - - - 0.992
65. rab42a ENSDARG00000034215 692 0.992 - - - - - - - - 0.992 RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
66. ppp2r2a ppp2r2a 5785 0.992 - - - - - - - - 0.992
67. U2_6 U2_6 1155 0.992 - - - - - - - - 0.992
68. efr3bb 1533 0.992 - - - - - - - - 0.992 EFR3 homolog Bb (S. cerevisiae), transcript variant X2
69. CABZ01049362.1 ENSDARG00000099508 570 0.992 - - - - - - - - 0.992
70. zgpat ENSDARG00000027403 1071 0.992 - - - - - - - - 0.992 zinc finger, CCCH-type with G patch domain [Source:ZFIN;Acc:ZDB-GENE-040426-1248]
71. rccd1 ENSDARG00000071074 560 0.992 - - - - - - - - 0.992 RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
72. rad21a_1 ENSDARG00000006092 4482 0.991 - - - - - - - - 0.991 RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
73. pygo2 ENSDARG00000036772 2510 0.991 - - - - - - - - 0.991 pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
74. pcyt1bb ENSDARG00000104207 1204 0.991 - - - - - - - - 0.991 phosphate cytidylyltransferase 1, choline, beta b [Source:ZFIN;Acc:ZDB-GENE-051120-48]
75. CU929052.1 CU929052.1 642 0.991 - - - - - - - - 0.991
76. grin1a ENSDARG00000027828 1327 0.991 - - - - - - - - 0.991 glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
77. nolc1 ENSDARG00000024561 3457 0.991 - - - - - - - - 0.991 nucleolar and coiled-body phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6349]
78. zgc:123105 ENSDARG00000003127 3061 0.991 - - - - - - - - 0.991 zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
79. ptpn21 ENSDARG00000062248 2010 0.991 - - - - - - - - 0.991 protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
80. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 0.991 - - - - - - - - 0.991 casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
81. tead1a ENSDARG00000028159 3574 0.991 - - - - - - - - 0.991 TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
82. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 0.991 - - - - - - - - 0.991 zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
83. nr2f1b ENSDARG00000017168 1487 0.99 - - - - - - - - 0.990 nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
84. svilb ENSDARG00000014651 4449 0.989 - - - - - - - - 0.989 supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
85. tomm20a ENSDARG00000090656, ENSDARG00000103163 2029 0.989 - - - - - - - - 0.989 translocase of outer mitochondrial membrane 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1976]
86. si:dkey-42i9.4 ENSDARG00000008049 4752 0.987 - - - - - - - - 0.987 si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
87. pitx2 ENSDARG00000036194 2279 0.987 - - - - - - - - 0.987 paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
88. dnmt1 ENSDARG00000030756 2741 0.986 - - - - - - - - 0.986 DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
89. CD99L2 ENSDARG00000056722 5588 0.985 - - - - - - - - 0.985 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
90. pdia5 ENSDARG00000069242 3576 0.985 - - - - - - - - 0.985 protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
91. api5 ENSDARG00000033597 6655 0.985 - - - - - - - - 0.985 apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
92. dtnba ENSDARG00000077694 5483 0.983 - - - - - - - - 0.983 dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
93. ube2e1 ENSDARG00000116649 10656 0.98 - - - - - - - - 0.980 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
94. BX539313.4 BX539313.4 1858 0.98 - - - - - - - - 0.980
95. NRAP ENSDARG00000009341 3565 0.979 - - - - - - - - 0.979 nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
96. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 0.979 - - - - - - - - 0.979 chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
97. RNF38 ENSDARG00000062055 3901 0.978 - - - - - - - - 0.978 ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
98. znf395a ENSDARG00000060113 3874 0.977 - - - - - - - - 0.977 zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
99. NDUFC2 ENSDARG00000102115 7848 0.976 - - - - - - - - 0.976 NADH:ubiquinone oxidoreductase subunit C2 [Source:ZFIN;Acc:ZDB-GENE-050320-87]
100. sec23b ENSDARG00000019360 6210 0.976 - - - - - - - - 0.976 Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]

There are 592 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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