Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hvcn1

Gene Name Gene ID Reads Annotation
hvcn1 ENSDARG00000040338 571 hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]










Genes with expression patterns similar to hvcn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hvcn1 ENSDARG00000040338 571 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
2. pip5k1bb ENSDARG00000006508 2812 1.84 - - 0.854 - 0.986 - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
3. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.823 - 0.837 - - 0.986 - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
4. ago4 ENSDARG00000100854 496 1.793 - 0.803 - - 0.990 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
5. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.782 - 0.796 - - 0.986 - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
6. plod1a ENSDARG00000059746 3364 1.735 - - 0.787 - 0.948 - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
7. clu ENSDARG00000010434 498 1.711 - - 0.720 - 0.991 - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
8. DLC1 ENSDARG00000079317 2149 1.708 - - - - 0.948 - 0.760 - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
9. SLC36A4 ENSDARG00000039661 175 1.611 - - 0.812 0.799 - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
10. TBC1D17 ENSDARG00000005927 163 1.604 - 0.817 - - - 0.787 - - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
11. elf3 ENSDARG00000077982 211 1.592 - 0.843 - - - 0.749 - - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
12. cdh17 ENSDARG00000005112 3816 1.577 - 0.723 - - - 0.854 - - - cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]
13. si:dkey-100n23.5 ENSDARG00000086911 427 1.576 - 0.781 - - - - 0.795 - - si:dkey-100n23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-347]
14. PIGG PIGG 106 1.573 0.819 - 0.754 - - - - - -
15. dync1i2a ENSDARG00000078386 53 1.572 0.854 0.718 - - - - - - - dynein, cytoplasmic 1, intermediate chain 2a [Source:ZFIN;Acc:ZDB-GENE-060929-1086]
16. grp ENSDARG00000043074 747 1.555 - 0.815 0.740 - - - - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
17. AL928724.1 ENSDARG00000097525 421 1.553 - 0.806 - - - 0.747 - - -
18. dkk2 ENSDARG00000076420 553 1.547 0.819 0.728 - - - - - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
19. EPS8L2 ENSDARG00000058108 484 1.54 - 0.804 - - - - 0.736 - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
20. crabp2b ENSDARG00000030449 3091 1.531 - 0.786 - - - - 0.745 - - cellular retinoic acid binding protein 2, b [Source:ZFIN;Acc:ZDB-GENE-050208-52]
21. spra ENSDARG00000004406 268 1.518 - - 0.705 0.813 - - - - - sepiapterin reductase a [Source:ZFIN;Acc:ZDB-GENE-050522-412]
22. BX323854.3 BX323854.3 62 1.507 - - 0.803 - - 0.704 - - -
23. chd 56 1.485 - 0.723 - - - 0.762 - - - chordin
24. si:dkey-4i23.5 ENSDARG00000092137 152 1.478 - 0.709 0.769 - - - - - - si:dkey-4i23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-543]
25. mycbpap ENSDARG00000069194 32 1.464 - - - - - 0.753 0.711 - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
26. zdhhc16b ENSDARG00000015989 193 1.457 0.729 0.728 - - - - - - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
27. SLC24A2 ENSDARG00000042988 242 1.454 - 0.710 - - - 0.744 - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
28. zgc:158222 ENSDARG00000051873, ENSDARG00000112532 642 1.447 - - - - - 0.716 0.731 - - zgc:158222 [Source:ZFIN;Acc:ZDB-GENE-070112-1522]
29. C9H3orf38 C9H3orf38 83 1.442 - 0.707 - - - 0.735 - - -
30. irf5 ENSDARG00000045681 2594 1.433 - 0.726 - - - 0.707 - - - interferon regulatory factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2587]
31. trpt1 ENSDARG00000037628 1081 1.427 - - - - - 0.716 0.711 - - tRNA phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050227-16]
32. CR388015.1 CR388015.1 311 1.423 - 0.705 - - - 0.718 - - -
33. hoxa11a ENSDARG00000104162 283 1.422 - - 0.701 - - 0.721 - - - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
34. spag7 ENSDARG00000011555 3224 0.993 - - - - 0.993 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
35. tab1 ENSDARG00000036613 445 0.993 - - - - 0.993 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
36. FOXL2 239 0.992 - - - - 0.992 - - - - forkhead box L2, transcript variant X1
37. lig4 ENSDARG00000060620 369 0.992 - - - - 0.992 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
38. si:dkey-20j1.4 si:dkey-20j1.4 406 0.992 - - - - 0.992 - - - -
39. myl2b ENSDARG00000053424 226 0.992 - - - - 0.992 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
40. ccr10 ENSDARG00000040643 255 0.992 - - - - 0.992 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
41. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.992 - - - - 0.992 - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
42. ercc6 ENSDARG00000075612 1175 0.992 - - - - 0.992 - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
43. pfkpb ENSDARG00000012801 223 0.992 - - - - 0.992 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
44. fam193b ENSDARG00000102831 442 0.992 - - - - 0.992 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
45. gorab ENSDARG00000042031 483 0.991 - - - - 0.991 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
46. bmi1a ENSDARG00000006010 2061 0.991 - - - - 0.991 - - - - bmi1 polycomb ring finger oncogene 1a [Source:ZFIN;Acc:ZDB-GENE-030131-224]
47. CR759921.2 CR759921.2 583 0.991 - - - - 0.991 - - - -
48. cenpi ENSDARG00000052565 482 0.991 - - - - 0.991 - - - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
49. med13b ENSDARG00000003910 1143 0.991 - - - - 0.991 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
50. TUSC5_1 TUSC5_1 320 0.991 - - - - 0.991 - - - -
51. atxn7l3 ENSDARG00000029331 531 0.991 - - - - 0.991 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
52. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 0.991 - - - - 0.991 - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
53. nefma ENSDARG00000021351 790 0.99 - - - - 0.990 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
54. ccdc28b ENSDARG00000011222 528 0.99 - - - - 0.990 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
55. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.99 - - - - 0.990 - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
56. slc2a15b ENSDARG00000053269 899 0.99 - - - - 0.990 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
57. dopey1 438 0.99 - - - - 0.990 - - - - dopey family member 1, transcript variant X4
58. msxe msxe 362 0.99 - - - - 0.990 - - - -
59. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.99 - - - - 0.990 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
60. hey2 ENSDARG00000013441 540 0.989 - - - - 0.989 - - - - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
61. cuedc2 ENSDARG00000039365 484 0.989 - - - - 0.989 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
62. BX005008.2 BX005008.2 708 0.989 - - - - 0.989 - - - -
63. fut8 fut8 652 0.989 - - - - 0.989 - - - -
64. aldh16a1 ENSDARG00000037935 617 0.989 - - - - 0.989 - - - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
65. larp7 ENSDARG00000017315 1194 0.988 - - - - 0.988 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
66. aspg ENSDARG00000052942 1406 0.988 - - - - 0.988 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
67. lgi1a ENSDARG00000020493 1218 0.988 - - - - 0.988 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
68. wdr24 ENSDARG00000025507 505 0.988 - - - - 0.988 - - - - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
69. pdpk1b ENSDARG00000018285 957 0.988 - - - - 0.988 - - - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
70. tmem88a ENSDARG00000056920 536 0.988 - - - - 0.988 - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
71. toporsb ENSDARG00000105028 1898 0.987 - - - - 0.987 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
72. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 0.987 - - - - 0.987 - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
73. TRAPPC10 ENSDARG00000098118 954 0.987 - - - - 0.987 - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
74. exoc3l4 ENSDARG00000058180 923 0.987 - - - - 0.987 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
75. smurf1 ENSDARG00000016086 878 0.987 - - - - 0.987 - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
76. mrrf ENSDARG00000034174, ENSDARG00000115754 791 0.987 - - - - 0.987 - - - - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
77. mnat1 ENSDARG00000002077 287 0.987 - - - - 0.987 - - - - MNAT CDK-activating kinase assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-041010-203]
78. usp16 ENSDARG00000060633 684 0.987 - - - - 0.987 - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
79. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.987 - - - - 0.987 - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
80. bloc1s3 ENSDARG00000068828 502 0.987 - - - - 0.987 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
81. si:ch211-150o23.2 ENSDARG00000092746 788 0.987 - - - - 0.987 - - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
82. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 0.986 - - - - 0.986 - - - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
83. srgap1 srgap1 2320 0.986 - - - - 0.986 - - - -
84. st8sia6 ENSDARG00000021195 2244 0.985 - - - - 0.985 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
85. brd9 ENSDARG00000017143 936 0.985 - - - - 0.985 - - - - bromodomain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060502-1]
86. MANBAL ENSDARG00000059853 636 0.985 - - - - 0.985 - - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
87. atp2a2a ENSDARG00000029439 940 0.985 - - - - 0.985 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a [Source:ZFIN;Acc:ZDB-GENE-040426-702]
88. ypel5 ENSDARG00000088929 1011 0.984 - - - - 0.984 - - - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
89. dvl3a ENSDARG00000015707 1132 0.984 - - - - 0.984 - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
90. eng1b eng1b 2544 0.984 - - - - 0.984 - - - -
91. katnbl1 ENSDARG00000042522 1086 0.984 - - - - 0.984 - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
92. loxl2b ENSDARG00000044074 1919 0.983 - - - - 0.983 - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
93. sulf2 sulf2 1286 0.983 - - - - 0.983 - - - -
94. FP245444.1 FP245444.1 1922 0.983 - - - - 0.983 - - - -
95. prdm16 prdm16 1346 0.983 - - - - 0.983 - - - -
96. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 0.983 - - - - 0.983 - - - - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
97. aatf ENSDARG00000025467, ENSDARG00000109548 796 0.983 - - - - 0.983 - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
98. smn1 ENSDARG00000018494 1024 0.983 - - - - 0.983 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
99. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 0.983 - - - - 0.983 - - - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
100. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.983 - - - - 0.983 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]

There are 1055 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA