Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for htt

Gene Name Gene ID Reads Annotation
htt ENSDARG00000052866 844 huntingtin [Source:ZFIN;Acc:ZDB-GENE-990415-131]










Genes with expression patterns similar to htt

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. htt ENSDARG00000052866 844 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 huntingtin [Source:ZFIN;Acc:ZDB-GENE-990415-131]
2. Sep-03 Sep-03 1124 1.584 0.796 - - 0.788 - - - - -
3. znf646p znf646p 719 1.575 - - - - - - 0.766 0.809 -
4. MDC1 ENSDARG00000086764 1851 1.575 0.843 0.732 - - - - - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
5. h2afx ENSDARG00000029406 2116 1.555 - 0.836 - - - 0.719 - - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
6. rbb4l ENSDARG00000015208 5542 1.549 - - - - - - 0.811 0.738 - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
7. ercc1 ENSDARG00000031680 900 1.546 - - - 0.738 - - 0.808 - - excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]
8. alg10 ENSDARG00000053917 491 1.545 - - - - - 0.725 0.820 - - asparagine-linked glycosylation 10 [Source:ZFIN;Acc:ZDB-GENE-110310-8]
9. ppig ENSDARG00000044431 3427 1.539 - 0.834 - - - - 0.705 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
10. paf1 ENSDARG00000098432 1806 1.53 - - - - - - 0.749 0.781 - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
11. triap1 ENSDARG00000014963 646 1.524 - 0.776 - - - - - 0.748 - TP53 regulated inhibitor of apoptosis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-161]
12. CABZ01078431.1 CABZ01078431.1 183 1.519 - - - - - 0.701 - 0.818 -
13. rcan1b 556 1.518 - 0.803 - - - - - 0.715 - regulator of calcineurin 1b
14. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.517 - - - - - 0.728 - 0.789 - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
15. SPIN4_1 SPIN4_1 2562 1.5 - 0.748 - - 0.752 - - - -
16. lig3 ENSDARG00000052553 2665 1.5 - 0.787 - - - - - 0.713 - ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
17. smarca5 ENSDARG00000052348 15433 1.496 - - - - - 0.733 0.763 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
18. CABZ01057907.1 CABZ01057907.1 1140 1.475 - - - - - - 0.732 0.743 -
19. PRKRIR PRKRIR 261 1.46 - - - - - 0.709 - 0.751 -
20. DTX4 ENSDARG00000076302 2642 1.455 0.746 0.709 - - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
21. smim15 ENSDARG00000086699, ENSDARG00000114331 1945 1.45 - 0.704 - - - - - 0.746 - small integral membrane protein 15 [Source:ZFIN;Acc:ZDB-GENE-070410-48]
22. dram2b ENSDARG00000044241 503 1.45 - - - - - 0.739 0.711 - - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
23. sh2d3ca ENSDARG00000028099 1037 1.44 - - - 0.739 - - 0.701 - - SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
24. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 1.44 0.716 - - - - - 0.724 - - NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
25. si:ch73-131e21.5 si:ch73-131e21.5 1895 0.892 - 0.892 - - - - - - -
26. slc35a4 ENSDARG00000062379 1088 0.887 - - - - - - 0.887 - - solute carrier family 35, member A4 [Source:ZFIN;Acc:ZDB-GENE-061103-595]
27. zc3h10 ENSDARG00000030335 236 0.877 - - - - - - - 0.877 - zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
28. ndfip2 ENSDARG00000033928 3129 0.875 - - - - - - 0.875 - - Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
29. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 0.871 - - - - - - 0.871 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
30. zcchc17 ENSDARG00000018936 1577 0.867 - - - - - - - 0.867 - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
31. rab1bb ENSDARG00000056479, ENSDARG00000109723 551 0.865 - - - - - - - 0.865 - RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]
32. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 0.863 - - - - - - 0.863 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
33. CT583658.1 CT583658.1 561 0.862 - - - - - - - 0.862 -
34. zbtb5 1484 0.862 - - - - - 0.862 - - - zinc finger and BTB domain containing 5
35. specc1lb ENSDARG00000042232 640 0.862 - 0.862 - - - - - - - sperm antigen with calponin homology and coiled-coil domains 1-like b [Source:ZFIN;Acc:ZDB-GENE-090423-1]
36. ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 0.86 - 0.860 - - - - - - - actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]
37. nmt2 ENSDARG00000021808 510 0.86 - - - - - - - 0.860 - N-myristoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-717]
38. bub3 ENSDARG00000075883 1333 0.857 - 0.857 - - - - - - - BUB3 mitotic checkpoint protein [Source:ZFIN;Acc:ZDB-GENE-041010-210]
39. CDCA2 CDCA2 930 0.855 - - - - - 0.855 - - -
40. chkb ENSDARG00000063167 440 0.854 - - - - - - - 0.854 - choline kinase beta [Source:ZFIN;Acc:ZDB-GENE-030131-2928]
41. sqrdl 1598 0.852 - 0.852 - - - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
42. nkrf ENSDARG00000100536 1873 0.848 - - - - - 0.848 - - - NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]
43. WDR77 2463 0.845 - - - - - - 0.845 - - WD repeat domain 77
44. F8A3 F8A3 646 0.844 0.844 - - - - - - - -
45. phlda1 ENSDARG00000099129 711 0.841 - 0.841 - - - - - - - pleckstrin homology-like domain, family A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041010-103]
46. MSS51 ENSDARG00000075463 428 0.839 0.839 - - - - - - - - MSS51 mitochondrial translational activator [Source:ZFIN;Acc:ZDB-GENE-130530-775]
47. fam32al fam32al 5716 0.837 - 0.837 - - - - - - -
48. trmt10c ENSDARG00000041575 447 0.836 - - - - - - - 0.836 - tRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:ZFIN;Acc:ZDB-GENE-041114-12]
49. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 0.835 - 0.835 - - - - - - - ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
50. scaper ENSDARG00000023104 491 0.835 - - - - - - - 0.835 - S-phase cyclin A-associated protein in the ER [Source:ZFIN;Acc:ZDB-GENE-060303-5]
51. rnmt ENSDARG00000070553 1743 0.834 - - - - - - 0.834 - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
52. fyna ENSDARG00000011370 1679 0.834 0.834 - - - - - - - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
53. gpr98 gpr98 717 0.833 - - - - - - - 0.833 -
54. leng1 ENSDARG00000037633 351 0.832 - - - - - - - 0.832 - leukocyte receptor cluster (LRC) member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-159]
55. ercc2 ENSDARG00000021985 678 0.832 - - - - - - - 0.832 - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
56. odf2 odf2 460 0.832 - - - - - 0.832 - - -
57. cyp2ad3 ENSDARG00000022650 672 0.831 - - - - - - - 0.831 - cytochrome P450, family 2, subfamily AD, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-041001-156]
58. CCDC61 ENSDARG00000062307 582 0.831 - - - - - - - 0.831 - coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
59. gdap2 ENSDARG00000021569 1013 0.831 - - - - - - - 0.831 - ganglioside induced differentiation associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-31]
60. samd1a ENSDARG00000102810 1037 0.83 - - - - - - - 0.830 - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
61. casc5 1487 0.829 0.829 - - - - - - - - cancer susceptibility candidate 5, transcript variant X3
62. gle1 ENSDARG00000043559 1362 0.829 0.829 - - - - - - - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
63. ZNF362 ZNF362 638 0.829 - - - - - - - 0.829 -
64. dnajb11 ENSDARG00000015088 1404 0.829 - 0.829 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 11 [Source:ZFIN;Acc:ZDB-GENE-031113-9]
65. mtmr2 ENSDARG00000004616 1052 0.829 - - - - - - 0.829 - - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
66. zgc:171459 ENSDARG00000077248 224 0.827 - - - - - - - 0.827 - zgc:171459 [Source:ZFIN;Acc:ZDB-GENE-030131-2059]
67. si:ch1073-174d20.2 ENSDARG00000079651 171 0.826 - - - - - - - 0.826 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
68. cadps2 ENSDARG00000013312, ENSDARG00000117190 144 0.826 - - - - - - - 0.826 - Ca++-dependent secretion activator 2 [Source:ZFIN;Acc:ZDB-GENE-030903-1]
69. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 0.825 - 0.825 - - - - - - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
70. spop ENSDARG00000100519 177 0.825 - - - - - - - 0.825 - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
71. GPR137B GPR137B 50 0.824 - - - - - - - 0.824 -
72. tfip11 ENSDARG00000056932 479 0.824 - - - - - - - 0.824 - tuftelin interacting protein 11 [Source:ZFIN;Acc:ZDB-GENE-040718-479]
73. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 0.824 - - - - - - - 0.824 - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
74. scnm1 ENSDARG00000003027 256 0.824 - - - - - - - 0.824 - sodium channel modifier 1 [Source:ZFIN;Acc:ZDB-GENE-030131-415]
75. tmem180 tmem180 430 0.823 - - - - - - - 0.823 -
76. PHC3 ENSDARG00000074604 239 0.823 - - - - - - - 0.823 - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
77. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 0.822 - - - - - 0.822 - - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
78. polr2gl ENSDARG00000056127 1771 0.822 - - - - - - 0.822 - - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
79. elmo1 ENSDARG00000098753 6966 0.821 - 0.821 - - - - - - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
80. plk3 ENSDARG00000038754 1687 0.821 - 0.821 - - - - - - - polo-like kinase 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6134]
81. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.82 - - - - - - - 0.820 - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
82. U6 U6 931 0.82 - 0.820 - - - - - - -
83. tnrc6b ENSDARG00000074161 4597 0.819 - - - - - - 0.819 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
84. atrip ENSDARG00000063076 385 0.819 - - - - - - - 0.819 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
85. cul1b ENSDARG00000007691 719 0.818 - - - - - - - 0.818 - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
86. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 0.816 - 0.816 - - - - - - - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
87. ubn2 ubn2 534 0.816 - - - - - - 0.816 - -
88. adnpb ENSDARG00000074293 796 0.816 - - - - - - - 0.816 - activity-dependent neuroprotector homeobox b [Source:ZFIN;Acc:ZDB-GENE-030131-6385]
89. tfec ENSDARG00000098745 1399 0.816 - - - - - - - 0.816 - transcription factor EC [Source:ZFIN;Acc:ZDB-GENE-041210-21]
90. si:dkeyp-104h9.5 ENSDARG00000073801 722 0.816 - 0.816 - - - - - - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
91. prrg4 ENSDARG00000030753 1008 0.815 - 0.815 - - - - - - - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
92. mier1b ENSDARG00000001447 1680 0.814 - - - - - - - 0.814 - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
93. CT573468.1 CT573468.1 283 0.814 - - - - - - - 0.814 -
94. kif1ab ENSDARG00000062024 794 0.813 - - - - - - - 0.813 - kinesin family member 1Ab [Source:ZFIN;Acc:ZDB-GENE-070912-480]
95. zgc:109744 ENSDARG00000070800 262 0.813 - - - - - - - 0.813 - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
96. rbm15 ENSDARG00000073847, ENSDARG00000110499 1307 0.813 - - - - - - - 0.813 - RNA binding motif protein 15 [Source:ZFIN;Acc:ZDB-GENE-041008-192]
97. kcnc1a ENSDARG00000051852 317 0.812 - - - - - - - 0.812 - potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
98. si:ch211-282k23.2 ENSDARG00000093591 447 0.812 - - - - - - - 0.812 - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
99. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.812 - - - - - - - 0.812 - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
100. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 0.812 - - - - - - - 0.812 - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]

There are 749 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA